LOC120557186


Basic Information

Item Value
gene id LOC120557186
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 29972493 ~ 29975991 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797286.1
GGAAACTATTTTGTTTATCAGTGGCTACATCCTGTTGGTCACAGCTCTTCTTTCAATCTGCTCTGGAACTATTCATACTACAAAACAGACTATATTTTGTCCCCGCCACTTTGTAATATTCAAAAAACTTTGTTGCACACGTCGCTTAAAGCGGTCAGGAGAGTTTAACTTAGAAACATCTGCCTGGAaatcctatttatttttttttttttttttactctggaGGGTTCAGTGTTAGCTTGTAACTTACCGTTAGCCTGCTGCTCTGAGAGCAGTGATGCTCGCTGACAGAGTTTATCTTTCTGCGTATTTCGACTGTTGACTCAAACCCGAGAGCCTTCATACATTATGGCGAGTGAAAACGCCGAGACAAACGCGGGGAACGATAATGAAACTGGTCCACCATCCGAACCAAACGAGCACGACTATGCCCACACTGCGGCCAGTAACTTAACTTCGACGGAGGCGTCTTCCTCCTCGGTTACACCGGCGGCTGACGGTGGGGTCCCCGCGCAGGAAAGCTTTACGACAGCGGCTGAACCCGAGCATAGCTCGCCAGGGCAGCCCACCCTGCCGGTGGAGCTTCCCGAACCGGCTGTGGGTGCCGAAGTGGACTGCCCCGGTGGAAATGATGTGGAGGTGTCTTCTCCTCCGAAGACCGAAGAGGACCCCCAAGAAGTAGATGCGACTAAACGTGTTGCTGCCATCTCTCCTGCAATGGGAATTGGCCGCTGGCGTCCTAAGCGGCCGGAGGACAAGAACTGCGCCACCTGTAAGTTTGAGTTCGAGCGGCAGGGCCGCAGGTTCAACCGGAGGGCAGTGTACACCTTCAGCAACCCGGAGACTGTGCAGTGGGTCTTCCCAGACGCCACAGTCAACGAGAAGTCCTTCCTTTGCGAGACCTGTGCACAGGTCATCAGGAACAAATGCAAACGCAAACAGAGCGGGAAGAGGACTCTGTGGCTGAAACCGCCTCAGACAAAacgggtatgtgtgtgtTCAGTGGTGAAAGACAAGAATAAGAGAGGTCGCAGGATGGGGAAGAAGAGCAAAGCGGCGCTGCTGGTGAGCAAGTCCTGCTACAAGTCTGCTTTCAAAATGCTCTGGTCCGCCAAAGGCGCCCGGAAGCCCATGATGGAGTTCTGGAGCAAACAGCTGAAAGAGGAGATGAAGGCGCTGAcgaggcagacagacagtccCTTTCATCAGAAGGTGTCGAACAGAAAGCCCCTGTCTTCCTTCCCCTGGCGGCGCTGTCTGAACTGGGCCCAGGACAAAGCTCCACTCGTCACCACCTGCCTCACCGCGCTGTTCCCTGACATCACCGCTCTCTCTAAGAGCAGCAAccAGATGTCGGCGGACCAGGCCCAGACTCTGCTGGAGCGCCGGGCCGTGTTGGCGCTGTCCATCCCGCTCTTCACCAGGAACATCTGGAAGAACAACTTCCTGCAGGCCGCTCTGGGGGCAGAGTTACGCCTGCAGGGCTGCTCTGGCACTGCCCTGGACGCCCTCAACACCATGGGACTGTGTCAGAACAAAGACACGGTCAGGTTACTGCTGCACAGGCTCCGAAACGGCAAGAAGAAGACACTAACACAGAATGGACGGCAGATGAAAGGAGAACAGATGTCAGACGTGGAGGAAGAGGATATTGAagaagaggggaggaggaggaggaagaagaagatgatgatgatgatgatgaggaagaggaggaagacgacGATGAcgatgaagaagaagaggaggaggatcaGGAAGAAGGCGAGGAAATGGAGATGGCGGTAGAGGAGGAAGAAATGGATGCGGTAGAGGTAGAAGTGCAACAGGTAGAGGAGGAAAAGGCAGAgatggagaagaagaggaggaagaagaaggcaaagaagcagaggaaggaggagaagagg
>XM_039797287.1
AACTATTTTGTTTATCAGTGGCTACATCCTGTTGGTCACAGCTCTTCTTTCAATCTGCTCTGGAACTATTCATACTACAAAACAGACTATATTTTGTCCCCGCCACTTTGTAATATTCAAAAAACTTTGTTGCACACGTCGCTTAAAGCGGTCAGGAGAGTTTAACTTAGAAACATCTGCCTGGAaatcctatttatttttttttttttttttactctggaGGGTTCAGTGTTAGCTTGTAACTTACCGTTAGCCTGCTGCTCTGAGAGCAGTGATGCTCGCTGACAGAGTTTATCTTTCTGCGTATTTCGACTGTTGACTCAAACCCGAGAGCCTTCATACATTATGGCGAGTGAAAACGCCGAGACAAACGCGGGGAACGATAATGAAACTGGTCCACCATCCGAACCAAACGAGCACGACTATGCCCACACTGCGGCCAGTAACTTAACTTCGACGGAGGCGTCTTCCTCCTCGGTTACACCGGCGGCTGACGGTGGGGTCCCCGCGCAGGAAAGCTTTACGACAGCGGCTGAACCCGAGCATAGCTCGCCAGGGCAGCCCACCCTGCCGGTGGAGCTTCCCGAACCGGCTGTGGGTGCCGAAGTGGACTGCCCCGGTGGAAATGATGTGGAGGTGTCTTCTCCTCCGAAGACCGAAGAGGACCCCCAAGAAGTAGATGCGACTAAACGTGTTGCTGCCATCTCTCCTGCAATGGGAATTGGCCGCTGGCGTCCTAAGCGGCCGGAGGACAAGAACTGCGCCACCTGTAAGTTTGAGTTCGAGCGGCAGGGCCGCAGGTTCAACCGGAGGGCAGTGTACACCTTCAGCAACCCGGAGACTGTGCAGTGGGTCTTCCCAGACGCCACAGTCAACGAGAAGTCCTTCCTTTGCGAGACCTGTGCACAGGTCATCAGGAACAAATGCAAACGCAAACAGAGCGGGAAGAGGACTCTGTGGCTGAAACCGCCTCAGACAAAacggTCAGTGGTGAAAGACAAGAATAAGAGAGGTCGCAGGATGGGGAAGAAGAGCAAAGCGGCGCTGCTGGTGAGCAAGTCCTGCTACAAGTCTGCTTTCAAAATGCTCTGGTCCGCCAAAGGCGCCCGGAAGCCCATGATGGAGTTCTGGAGCAAACAGCTGAAAGAGGAGATGAAGGCGCTGAcgaggcagacagacagtccCTTTCATCAGAAGGTGTCGAACAGAAAGCCCCTGTCTTCCTTCCCCTGGCGGCGCTGTCTGAACTGGGCCCAGGACAAAGCTCCACTCGTCACCACCTGCCTCACCGCGCTGTTCCCTGACATCACCGCTCTCTCTAAGAGCAGCAAccAGATGTCGGCGGACCAGGCCCAGACTCTGCTGGAGCGCCGGGCCGTGTTGGCGCTGTCCATCCCGCTCTTCACCAGGAACATCTGGAAGAACAACTTCCTGCAGGCCGCTCTGGGGGCAGAGTTACGCCTGCAGGGCTGCTCTGGCACTGCCCTGGACGCCCTCAACACCATGGGACTGTGTCAGAACAAAGACACGGTCAGGTTACTGCTGCACAGGCTCCGAAACGGCAAGAAGAAGACACTAACACAGAATGGACGGCAGATGAAAGGAGAACAGATGTCAGACGTGGAGGAAGAGGATATTGAagaagaggggaggaggaggaggaagaagaagatgatgatgatgatgatgaggaagaggaggaagacgacGATGAcgatgaagaagaagaggaggaggatcaGGAAGAAGGCGAGGAAATGGAGATGGCGGTAGAGGAGGAAGAAATGGATGCGGTAGAGGTAGAAGTGCAACAGGTAGAGGAGGAAAAGGCAGAgatggagaagaagaggaggaagaagaaggcaaagaagcagaggaaggaggagaagagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797286.1 True 1907 mRNA 0.54 5 29972493 29975991
XM_039797287.1 False 1892 mRNA 0.54 5 29972496 29975991

Neighbor

gene id symbol gene type direction distance location
stab1 NA coding upstream 135027 29725512 ~ 29837466 (+)
nisch NA coding upstream 255153 29670469 ~ 29717340 (+)
hgh1 hgh1 coding upstream 315308 29639606 ~ 29657185 (+)
zgc:153675 LOC104941726,LOC100706129,LOC106954467,LOC103130791,LOC107080719,LOC105920322,LOC101469258,LOC103464637 coding upstream 335853 29630099 ~ 29636640 (+)
LOC120557724 cenpp,LOC104951285 coding upstream 376627 29485167 ~ 29595866 (+)
LOC120557789 NA coding downstream 110432 30086423 ~ 30088843 (+)
LOC120558110 LOC103358872,LOC102788290,LOC106565051,LOC100694607 coding downstream 116176 30092167 ~ 30098233 (+)
hesx1 NA coding downstream 126911 30102902 ~ 30106485 (+)
mych LOC103358868 coding downstream 218648 30194639 ~ 30198902 (+)
LOC120557912 NA coding downstream 378975 30354966 ~ 30377896 (+)
G42536 NA non-coding upstream 311067 29661206 ~ 29661426 (+)
LOC120557726 NA non-coding upstream 505831 29464818 ~ 29466662 (+)
G42453 LOC104927822 non-coding upstream 680748 29256755 ~ 29291745 (+)
G42441 NA non-coding upstream 744173 29225774 ~ 29228320 (+)
G42426 NA non-coding upstream 784779 29186974 ~ 29187714 (+)
G42672 NA non-coding downstream 15932 29991923 ~ 29994778 (+)
G42674 NA non-coding downstream 26682 30002673 ~ 30005924 (+)
G42675 NA non-coding downstream 33046 30009037 ~ 30010008 (+)
G42700 rpp14,LOC102775666,LOC103374991,LOC104948461 non-coding downstream 61006 30036997 ~ 30040399 (+)
G42727 NA non-coding downstream 159995 30135986 ~ 30137009 (+)
G42449 NA other upstream 730240 29240413 ~ 29242253 (+)
ephb2b LOC104917933,LOC103376520 other upstream 2149233 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 3207756 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 3423694 26542507 ~ 26548799 (+)
G41825 NA other upstream 3699178 26268602 ~ 26273315 (+)
ergic3 ergic3,LOC102788871 other downstream 133544 30109535 ~ 30135834 (+)
G43045 NA other downstream 2484141 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 2494804 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 3061943 33037934 ~ 33041311 (+)
G43277 NA other downstream 3211747 33187738 ~ 33212318 (+)

Expression


Co-expression Network