LOC120557194


Basic Information

Item Value
gene id LOC120557194
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 13943758 ~ 13955896 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797306.1
CCATCTTAATCCAGTCTCTCTGGTAGCTTTACACAGATTCTTCATTTGAGTttctggtttctgccagttctgtTTTAAGTGATTTTAATAAATAGCCACTATGGCTAACCAGAGATTTCTGCGCGCTCCTGTCACTTTAAAGGGAGCGCGCTCTCAGCATTTAAAGCTGTCAGATCGCTTGCGTCACTACTACACGCTTGTCGCGGGCGTTAGTTGAGTTTACATTCAGGGCACGGAGTAAAAACGCGCAATACACACGCCAAACAGCCAAACACACACGCGTTACCGGGGAACAGAATAATGGCGTCTGTGAGTGTGGTGGGGCAGCACCCGGTTCCGCACAGGCTGGACTCGGAACCTCTGCTCTTCAAACTACCCGGCAGCAGGAAGAAAATCACCCTGCCGAGGAAATCGTCCTGGGAGAAGATGATGCTCAGGAGAAGCTCGGGGAGCGGCGGGGAATGCGGCTCGTTCGTAACTGAAGGGGAACCGAGAACTCACCCCTTGTCTCCGGGAGCAGCGGGTGAAACGGCGGTGAAAGGAGGGTTGGTGTCCGGTGAAGGATGCAGAGCTCCTGCCGCCCCTGCTGCGCCACGTAGCGCAGACCgggacagagaggaggacagcacgGACTGCGTCAGGCGCACCGCAGCCGGCGGGTCTCAAGAAAGTCCAACCGCGCACATCAACAGTGACTGCAACAGCAGCACCGAGTGTGACTCAAACCGTAACACGGGTGGTCTGAGGGGGACTTCGCTCAAGAGGTCGGGCACCAATGTCATGCCAAGCAAAGCGGTTACGAATGGACACAAAGGAGCCCACCGGCACCGAGACGCGCCATACGGGAGACGGGACACCCGGAGCGGAGACAGCGGACATCAGAGCATCTCCTCCTCCGTGCCAGCACAAGGAGACAGCGGCAGTCTTCCTCTGGAGCGGCTTACACAGGGCAAGACTGGAGTCGTCAGGCTGGCCCGCACCGAGCCTCAGCGCAGGGAGGCCTGGTCCATCTTTCCCCGGGGGGTGGACCCTCGGGTGAAGACAGAGAGGGGCGAAGGGCACCGGTTCGAGTCAAAGCCCTGTACGCAGGACTGGTGTGACGCCTGTAGCCGTCAGATCACTGCACAGGCACTCAAGTGTCAAAGAGTTAGAAGAGATGATGCAGGAACGGGAAAGAATGATGGGAGTGGGCCGGGATTTTAGGAgacggaaaagaaaaaaacatgaccaTGGAAAATCTTTCACTCGGCGGCCTCCACCAGGACTATCTTAATGTCTTCTTTTTAGAGCAGAATTGTCATTTTACATGTTGCAATCGAAGCTCCCACTTTCCCGTCTCCATTCGCAGTTATCGACCCAACAAGTTAACACAGCCACCACATATAGATCTTGACGTGCTGTACATCTAAGCTCCCTCATCTCTTTCCGCTGCACTGATGGAGTTTCCTACCGctctctatttttatttttttttttctcttctccatctccatctATCTGCATCATCGCCCAGCTCTGTCTGGAGGCAGTGTCATTTTAAAAGCAGTCAGACTGGAATGATGGCATGAGAGACAAAGAGGGAGTCTGAACATGCATCTCCTGCGGCGGAGGAGGCCAGTCTACCATGGCGACACATAGCACCACAGCCCCTTCCTTTTgttgagacaacacacacacacacacacacacacacacacacacacacacacaaatatagaaAGTAAAAGGTAGTTTCCAGCCTAATTTGGAGTGATAAAGATGGAAGTAGGATGTGTCCGTGCATGTGCAGAATCCAATGCCGGGACCTATTTTCTAACAAAACCTGTTGTGGCAATCCCGTAAGTGAACTTGAACACAACTTCTACCAAAATCCCGCAGAGTGGAATCGTTGTCGCTGTCTTTTAAATGAAAGCAACTTCCTCATTTGATAGTCTGCGTAACCATGTACTTTCCACAAAATAGCAAAAAGGGAAACCCCTGCAAGTCCTAACATGGAGTCCAGCGGGGAGTTTTGCCTCAGGCATTCAAACGGCtgccacattaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797306.1 True 2072 mRNA 0.52 2 13943758 13955896

Neighbor

gene id symbol gene type direction distance location
ikbke ikbke coding upstream 2459 13920513 ~ 13941299 (+)
srgap2 srgap2 coding upstream 24743 13857761 ~ 13919015 (+)
tmem183a tmem183a,LOC102794008 coding upstream 487709 13446291 ~ 13456049 (+)
myog myog coding upstream 561116 13380120 ~ 13382642 (+)
LOC120557160 sort1 coding upstream 579418 13353068 ~ 13364340 (+)
LOC120557195 rassf5,LOC104925239 coding downstream 8403 13964299 ~ 13976366 (+)
dyrk3 dyrk3 coding downstream 22840 13978736 ~ 13988512 (+)
mapkapk2a mapkapk2,LOC104959968 coding downstream 50460 14006356 ~ 14045222 (+)
fmoda LOC104959962,LOC103367868 coding downstream 157080 14112976 ~ 14119447 (+)
slc6a14 slc6a14,LOC103367878 coding downstream 165719 14121615 ~ 14132772 (+)
LOC120556887 NA non-coding upstream 166608 13775781 ~ 13777150 (+)
G38001 NA non-coding upstream 827186 13115654 ~ 13116572 (+)
LOC120556864 NA non-coding upstream 863871 13075419 ~ 13079887 (+)
G37980 NA non-coding upstream 870933 13071974 ~ 13072825 (+)
G37978 NA non-coding upstream 871888 13070171 ~ 13071870 (+)
G38163 NA non-coding downstream 36013 13991909 ~ 13992179 (+)
G38164 NA non-coding downstream 47066 14002962 ~ 14003187 (+)
G38206 NA non-coding downstream 89461 14045357 ~ 14045559 (+)
G38247 NA non-coding downstream 237207 14193103 ~ 14195417 (+)
G38274 NA non-coding downstream 338037 14293933 ~ 14294157 (+)
tfeb tfeb other upstream 415439 13456929 ~ 13528319 (+)
mdm4 mdm4 other upstream 571386 13319684 ~ 13372372 (+)
per3 per3 other upstream 614426 13305415 ~ 13329332 (+)
vamp3 vamp3 other upstream 640143 13296376 ~ 13303615 (+)
spcs1 spcs1 other upstream 735500 13205469 ~ 13208258 (+)
LOC120557956 nrn1,LOC104931831,LOC102785075,LOC100692329,LOC102195708,LOC102307414 other downstream 271201 14227097 ~ 14233537 (+)
LOC120557952 mettl21b other downstream 379264 14335160 ~ 14337760 (+)
cdk4 LOC107684003,LOC107701179 other downstream 784713 14740609 ~ 14757359 (+)
znf740a LOC107385642,LOC101469799,LOC102214350,LOC102304359,LOC103376569,LOC107082105,LOC100709046 other downstream 809401 14765297 ~ 14857069 (+)
G38517 NA other downstream 852456 14808352 ~ 14816436 (+)

Expression


Co-expression Network