pa2g4a (pa2g4,LOC104933448,LOC102793326)


Basic Information

Item Value
gene id pa2g4a
gene name pa2g4,LOC104933448,LOC102793326
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 15903500 ~ 15913619 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797315.1
atcctaggaaacgCAAATTGTCCAGCGGGAGGCCGGGGTGTTAGCTTAGCAGCACGTCAGAACCGAGCTCAGGGGAACTGTCTGTTGCCTTTCAGGGCCGACTAGCGACTGAAACTTCACTCACTGCCAAGATGTCCGACGAGGAGCAAGAGCAGACCATAGCTGAGGATCTGGTGGTCACCAAGTACAAGATGGGTGGTGACATCGCCAACCAGGCTCTTCGTCTGGTTGTGGAAACAGCCAAGCCTGGGGTGTCGGTGCTCAGCCTCTGTGAGAAGGGGGATGCCTACATCATGGCTGAGACTGGAAAGGTCTTTAAGAAGGAAAAGGAAATGAAGAAAGGCATTGCCTTTCCCACCAGCGTCTCAGTCAATAACTGTGTTTGCCACTTCTCTCCCCTGAAGAGTGACCCTGACTACGCACTTAAAGATGGGGATCTGGTCAAAATAGATCTTGGGGTTCATGTTGATGGCTTCATTGCCAATGTTGCTCACAGCTTTGTGGTAGGAGCCAGTAAGGAGAACCCCATCACAGGCCGGAAAGCTGATGTAATCAAAGCGGCCCATCTGTGTGCAGAAGCAGCTCTTCGCCTTGTTAAGCCTGGTAACCAGAACAATCAAGTGACGGAAGCCTGGAACAAGATCGCTCAGTCGTTCAAATGCTCACCAATCGAGGGTATGCTGTCTCATCAGCTAAAGCAACATGTCATAGATGGAGAGAAGACCATCATTCAGAACCCGTCAGACCAGCAAAGGAAGGACCATGAGAAGGCAGAGTTTGAGGTACATGAAGTCTATGCTGTGGACGTCTTGATTAGCAGCGGAGAAGGGAAGGCCAGAGATGGAGGTCTGAGGACCACGATTTATAAAAGGGACCCCAGTAAGCAGTACGGCTTGAAGATGAAAACTTCCCGTACGTTCTTCAGCGAAGTAGAACGACGCTTTGATGCCATGCCCTTTACTCTCCGGGCGTTTGAGGATGAGGCCAAAGCCCGTCTGGGTGTGGTAGAGTGTGCCAAACATGAATTGTTACAGCCCTTCAGTGTGCTACACGAGAAGGAGGGGGAGTGTGTAGCTCAGTTTAAGTTCACAGTGCTGCTGATGGCAAACGGGCCTCACAGAATCACCAGCGGACCCTTCGATCCAGAGCTCTACAAGTCAGAGCATGAAGTTCAGGATGCAGAGCTAAGGACTTTACTACAGAGCTCTGCAAGCCGtaaaacacagaagaaaaagaaaaagaagGCCTCAAAGACGGCAGAAACTGCAACCGGACAGCCAACCGAGGTCACAGAGGCcacagaataaataaatactgccTTTTCACACATGCAAGACCCCAAAGAGAAGCAAGAGAAAACATGACAAATTGCCCCAAACTCTGCCCATAATACACCTAATAGTGATTTCATTAATAAAACTGATGAATTTTAGATCCTACATGGATGCTTATCACTTTACTGCATTTATTGAAAGTACCATGTTGCTCTTTCTTCCCTAACTTGGGAGTAGAATAGTAATCACAAATAGTTTTATCTTTAAAAACACTTGTTGCCAAATGGTACGTGCGCGActaatgtctgtgttttttaacTCTTTTGGTCCTTCATGTTTGTATTATTTGCAGCTGAACATTTCCTTTCAAGTAAAACTGAAGCTTAAAGTGGGGATTATTGGGAGTGAATGGCTCGGTGTTTTTGACATCCAACTGCAGATGAAGGATTATTGGATGATACCAACTGAAACGTGAATCACTTTGGTAGACTCTGTATTCCTTTCTCTAAGGCATCATGTATCTGAGGCCATCATGGATTCTCCTGTTTGAATGGGATGGTTTGACTGAATTGTCGTGGGTTGTTTCCCTTTGGCAACAAAGTTACAAGTTATCTGAACTTGTTTATATGTAAACAAAGATTTATAGTAAAATTAATATTCAGATATTTTATTGAAAGGTTTATTAGCACTTTGTCACCTCTAAAGTGTGAGAATCATAAGTGATGAGTTCAGTCATCCAgtgcattatgaaaaaaaatgtacctTTTAGCTACACTATGCAGTAAAGGGTTACATTATAAATTTGAATGGACAAAACAAAATGGACAATAAATGATGGTAATTACAAGGAGTGTAATATAAAAGATGTTTTTTGCATCAGAGCTAACATAGTGAGggtttgtgttttctcttccaTCAAGGCCTGACCACATCTTTGGCTGAAACTACAATGTTTTAACTGAGATTCTTAAAGCATAAACCTGAGCAAAAGTGTtttcaaagcaaaaaaaaaccaaaccgCTGTAATCAGCTTGACTTTAGGGAACAAAACTGCTACATTTACTGCCATTCCCCTTGAATTTTATGAGAAGATAGAAATCTATACGTTCCACTTTTGAAAAACTTTTCTATTAGTGACACATGCTACTGGCTTTATTGGACATTAGTCATGTGAGGCTTGAAAACTAAAGCTGgccaagctttaaaaaaaaaaaggttttagggGTGTCTTCAGTGAAATTGGACCAGTAAGAGATCATTTAAGGACTGAGTTTCATTTTTAAGGTCTGGATCACATTTGTCAACAGTTGAATATGTTGATGAGCGTAAAATCCTGCTTTGTAGCTCATCTGTGGGCATTGGATCTTTACatctaattaataaaaaaatgtcataca

Function

symbol description
pa2g4 Enables nucleic acid binding activity; transcription corepressor activity; and ubiquitin protein ligase binding activity. Acts upstream of or within negative regulation of transcription, DNA-templated. Located in cytoplasm and nucleolus.

NR:

description
proliferation-associated protein 2G4-like

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797315.1 True 2671 mRNA 0.43 13 15903500 15913619

Neighbor

gene id symbol gene type direction distance location
erbb3a erbb3 coding upstream 3599 15879790 ~ 15899901 (+)
arf3b arf3,ARF3,arf3a,LOC102781726,LOC106921537,LOC106954774,LOC104956878 coding upstream 26640 15871718 ~ 15876860 (+)
LOC120557571 ikzf4 coding upstream 43729 15851997 ~ 15859771 (+)
LOC120556934 LOC104941416,LOC101064200 coding upstream 69566 15824383 ~ 15833934 (+)
ankrd33ab LOC103367911 coding upstream 79935 15818623 ~ 15823565 (+)
vhl vhl,LOC104941408 coding downstream 29145 15942764 ~ 15945552 (+)
tatdn2 NA coding downstream 34830 15948449 ~ 15960280 (+)
LOC120558102 LOC104943766 coding downstream 78115 15991734 ~ 16011506 (+)
prkcda prkcd,LOC104933455 coding downstream 103360 16016979 ~ 16034962 (+)
rft1 rft1 coding downstream 122355 16035974 ~ 16039274 (+)
G38885 LOC104942130 non-coding upstream 141185 15760792 ~ 15762315 (+)
G38852 NA non-coding upstream 148441 15673979 ~ 15755059 (+)
G38860 NA non-coding upstream 174100 15727979 ~ 15729400 (+)
G38858 NA non-coding upstream 181316 15718996 ~ 15722184 (+)
G38832 NA non-coding upstream 259101 15644061 ~ 15644399 (+)
G38948 NA non-coding downstream 920 15914539 ~ 15914901 (+)
LOC120557201 NA non-coding downstream 5766 15919385 ~ 15921622 (+)
G38966 NA non-coding downstream 71005 15984624 ~ 15985096 (+)
G39052 LOC101067125,LOC103386161,LOC103365890 non-coding downstream 281760 16195379 ~ 16195784 (+)
G39076 LOC104930492,LOC103358728,LOC102300171,LOC101465142 non-coding downstream 321395 16235014 ~ 16251725 (+)
G38834 NA other upstream 255649 15645511 ~ 15647851 (+)
calcoco1b LOC104959845,LOC103376572 other upstream 1029041 14865059 ~ 14874459 (+)
znf740a LOC107385642,LOC101469799,LOC102214350,LOC102304359,LOC103376569,LOC107082105,LOC100709046 other upstream 1046431 14765297 ~ 14857069 (+)
G38517 NA other upstream 1087064 14808352 ~ 14816436 (+)
cdk4 LOC107684003,LOC107701179 other upstream 1146141 14740609 ~ 14757359 (+)
crbn crbn,LOC102793823 other downstream 9702 15923321 ~ 15937097 (+)
ccdc174 ccdc174 other downstream 51783 15965402 ~ 15974237 (+)
eefsec eefsec,LOC102787825 other downstream 136059 16049678 ~ 16060330 (+)
LOC120557902 rab7,rab7a,LOC102230535,LOC106583206,LOC105017191,LOC101061812 other downstream 235506 16149125 ~ 16158362 (+)
G39104 LOC103385912,LOC104930488,LOC103358732,LOC101079922 other downstream 519619 16433238 ~ 16435229 (+)

Expression


Co-expression Network