ipo9 (ipo9)


Basic Information

Item Value
gene id ipo9
gene name ipo9
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 23234327 ~ 23254218 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797347.1
TGCTTCCTCCCGCAAAACCCCGCCTCCACGTTTCCATGCATTGGCGCGCTTCACCTCAGGCTCTGGCTCTCTGCTCCTCCCCGGGTGGCTGTGGTGGTGGACTGACTCTGTAGCGGGCTCCGGGTAAAAACACAGCAGGCATGAGTGCGGCGGGTAGTGCTCGGTCCGGTTCGGCCGCTGGCCCGGTACAGCAGGGACTAAAAGAGGCTCTGATAGAAACGCTGACGGCCATTCTGTCCCCGGTTCAAGAAGTGCGCGCCGCCGCGGAGGAGCAGATCAAAGTGCTGGAAGTGACAGAGGAGTTTGGTGTCCATCTGGCAGAACTCACAGTTGATCCTCAGGGAGCGCTTGCAATCCGTCAGTTAGCATCAGTCATCCTGAAGCAGTATGTGGAAACTCACTGGTGTTCCCAGTCAGAGAAATTCAGGCCTCCGGAAACTACAGATCAGGCAAAAGCCGCCATCAGGGAGCTGCTGCCAAGCGGTCTGCGGGAGGCGATCAGCAAAGTCCGCTCCAGCGTTGCGTACGCCGTGTCGGCCATCGCCCACTGGGACTGGCCCGAGGCCTGGCCACAGCTGTTCACTCTGCTGATGGAGATGCTGGTCAGCGGAGACGTCAATGCTGTGCACGGGGCAATGAGGGTCCTAACAGAGTTTACTCGGGAGGTGACTGATACACAGATGCCGCTGGTGGCTCCGGTCATCTTACCTGAAATGTACAAGATCTTCACCATGGCCGAGGTGTACAGTATTCGTACCCGATCTAGAGCAGTGGAGATATTCACCACCTGTGCCAACCTCATCTGTGCTATTGAAGAGCTTGAGAAGGGTGCAGCCAAAGCGTTGATCTTCCCTGTGGTGCAGCAGTTCACAGAAGCGTTTGTGCTGGCTCTGCAGATGCCTGACGGACCCTCGTCTGATAGCGGTCTTAAGATGGAAGTCCTCAAGGCAGTAACAGCGTTGGTGAAGAACTTCCCCAAACCCATGGTGTCCTCTATGCAGCAGATATTACCCATTGTTTGGAATACACTGACTGAAAGTGCAGCTTTTTACGTGAGAACAGAAGTCAACTACACGGAGGAAGTGGATGACCCTGTAGACTCGGATGGTGAGGTTTTGGGTTTTGAGAATCTGGTGTTCAGCATCTTTGAGTTTGTCCACACGCTGCTGGAGAACAACAAGTTCAAGAGCACAGTGAAGAAAGCCCTGCCCGAACTCATCTATTACGTCATCTTGTACATGCAGATCACTGAGGACCAGATTAAAGTGTGGACGGCGAACCCCCAGCAGTTTGTagaggatgaggatgatgacACCTTCTCTTACTCTGTCAGGATCTCTGCTCAGGACCTGCTGCTGGCTGTTGCTGCAGAGTTTCAGAATGAGAGTGCAGCAGCGCTGGCAGCGGCAGCGACAAGACATCTCCAGGAGGCAGAGCAGGCCAAAAACAGTGGCAACGAGCACTGgtGGAAGATCCATGAAGCCTGCATGTTGGCCCTCGGCTCTGTCAAAACCATCATCACAGAGAACGTGAAGAACGGTCGTATCCAGTTTGACATGCATGGCTTCCTGGCTAGTGTCATCCTCGCTGACCTCAACTTGGCAGCGGCGTCTCCATTCCTCCTCGGCCGGGCTCTGTGGGCGGCCAGTCGCTTCACAGCAGCCATGTCTCCTGAGCTCATCCAGCAGTTCCTCCAGGCCACCGTCAGTGGCCTGCACGACAGCCAGCCACCCTCCGTTCGCATCTCCGCGGTCAGGGCCATCTGGGGGTATTGTGATCAGCTGAAGCTGTCGGAGAGCACACACGTCCTTCAGCCCTTCCTCCCCAGCATCCTCGAGGGACTGGTCCAACTTGCCGCCCAGTTCAGCTCCGAGGTGCTCACCCTCGTCATGGAGACTCTGTGCATTGTCTGCACTGTCGACCCGGCCTTCACCACCAGCGCAGAGAACAAGATCTGCCCCCTCACCATTGCTATTTTCCTTAAATATAACAATGACCCTGTGGTGGCGTCCCTGGCTCAGGACATCTTCAAGGAACTGGCACAGATCGAAGGCTGCCAGGGCCCCATGCAGATGCGTCTCATTCCCACGCTGGTCAGCATCATGCAGGCTCCCTCCGACAAGATCCCCACTGGACTCTGCGCTACGTCTATCGACATCCTGACCACAGTTGTCCGAAACTCAAAACCTCCTCTCTCAGAGATGCTGGTGTGCCAGGCATTCCCTGTGGTGGCACAGTGCACCTTGCGCACCGATGACAACACCATAATGCAGAACGGAGGTGAGTGTCTGCGGGCGTACGTCTCTGTCGCCCTCGAGCAGGTCGCTCAGTGGAGGGACGAGCAGGGGCACAGCGGCCTCTGGTACGTCATGCAGGTGGTCAACCAGCTACTGGACCCCCGGACCTCCGAGTTCACAGCCGCCTTCGTCGGCAGGTTGGTGTCCACTCTGATCTCTCGGGCAGGAACCCAGCTGGGGGAACAGCTGGACCAGATCCTCCGAGCGATTCTGAGCAAGATGCAGCAAGCGGAGACTCTGAGTGTCATGCAGTCTCTGATCATGGTGTTTGGTCACCTGGTTCACTCCCAGCTGGAGCCTCTGTTGGAGTTCCTGTGCAGTCTGCCCGGCCCGACGGGGAAACCTGCCCTGGAGTTCGTCATGACAGAGTGGATGAGCAGGCAGCACCTCTTCTACGGACAGTATGAGGGTAAAGTCAGCACGGTGGCTCTCTGTAAGCTGCTGCAGCACGGTCTCAACACGGACGACAAACGTCTTCAGGACATCGTGGTGAAGGGAGAAGAGATCTACAGCCCTGAAGACGGCATCCGCACACGCTCCAAATCAGCAAAGAACCCAGAGCGGTGGACCAACATTCCTTTGCTAGTGAAGATCTTTAAATTGATAATAAATGAGCTGTCGACTGTAGTGGAGGCAAACGCCAGCAGGGGGAACGCAGGAGACTGGAGTCAAGATTCCAGTGGTATGTGGGAGGGGGAGGATGAGGGGGAGGATGAAGAGGACGAGGATGAAGGCCTTGCGGGGCAGCTGCTTTCTGATCTCATCGCCTCCAACAAATACGATGATGATTATTACGAGGACGATGAGGAGGATGATCCAGATGCTTTGAAAGACCCCATATATCAGATTGATTTGCAGGCTTACCTGACAGACTTCCTGACACAGTTCGCCCAGCAGCCATGTTACAGCATGTTCTCGGGCCACCTCAACACCGCCGAGAGACAAACCCTGCAGTCTATAGGCCTCTAGCCCCGCCGTCTGCCGCTCCAACACATCTTCTTCCATCTAAGCTCTCTCCTAATGCCCCATCACTTATGTGCTCATGATGAATTAACGACATGgcaaagaaaaaggagaaatgGGATGATGGCCTTGGCGGAGGAAGGAGCCGGGTTAAAAGAGATGGACATGCACTTGCCCACAACGCCCCTGTTTCTACGTACTCATGATGGGATGAAGGACTTTGCAGATGTTAAAGCGATGAGGATGAAGAGGTGAGAGACTGCCCAGGTCTGTTCCTGAAGGTCATAGGACTCACCATTTTAGAGTAATTTCAGACTGGACGAAAGGAATTGAATAAAAAGGTTGAGGCTTCACAGTGGGACAGGcaaaacattaaatatgaaCGGACTATTTTGCCATGTCCTATTTGTAACTTAGCCCgttatttttgtgtttctgtatAAACAGAGTAAAAATGCAACCTAGAAAACCCTTCCAAGAGACTTTACATTGATGGAAGGAAAGTCAAACAAAAACCGACATCGGGATCTTTGGGGAAGGGAGAGAAACTTCGACAGCCTTTTATTCCAGAAAACCATTGACTGTTTCTGACCTGAAATGAAAAGCTCTTCGACCAGCTGTCATGTCTAGGGCTTTGTTGGGTATTTTGGAAATTCACACGGTTGCCATGGTGATTCACAGCCTGTTCATTTCCTTGTACACCCATTGAAATTTGGGATGGAgaaatttctaaataaaaagtACCGAAAGGACAACATT

Function

symbol description
ipo9 Predicted to be involved in protein import into nucleus. Predicted to act upstream of or within intracellular protein transport. Predicted to be active in cytosol and nuclear envelope. Is expressed in several structures, including blood; immature eye; nervous system; ventral mesenchyme; and ventral mesoderm. Orthologous to human IPO9 (importin 9).

NR:

description
PREDICTED: importin-9

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
K20224 IPO9, RANBP9; importin-9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797347.1 True 4019 mRNA 0.53 24 23234327 23254218

Neighbor

gene id symbol gene type direction distance location
LOC120557748 LOC103355891,LOC100710082 coding upstream 20468 23182449 ~ 23213859 (+)
slc32a1 slc32a1,LOC102787607,LOC100693191 coding upstream 80657 23149075 ~ 23153670 (+)
LOC120556778 arhgap40 coding upstream 107675 23106818 ~ 23126652 (+)
shmt2 LOC103359782,LOC102307393 coding upstream 298760 22909436 ~ 22935567 (+)
LOC120556810 nxph4,LOC103359783 coding upstream 328140 22860054 ~ 22906187 (+)
shisa4 shisa4,LOC102788956 coding downstream 2300 23256518 ~ 23265863 (+)
lmod1b lmod1 coding downstream 12631 23266849 ~ 23271555 (+)
timm17a timm17a,LOC102789540 coding downstream 20211 23274429 ~ 23280729 (+)
LOC120557228 rap1b,rap1a,rap1ab,LOC105901888,LOC106566052,LOC107560426,LOC107742898 coding downstream 27924 23282142 ~ 23307066 (+)
cttnbp2nla cttnbp2nl,LOC102311171,LOC100709543 coding downstream 219130 23473348 ~ 23487987 (+)
LOC120557222 NA non-coding upstream 1369 23232172 ~ 23232958 (+)
G41118 NA non-coding upstream 18532 23214158 ~ 23215795 (+)
G41114 LOC104933616,LOC107385352,LOC103355892,LOC103464385 non-coding upstream 62021 23163529 ~ 23172306 (+)
G41112 NA non-coding upstream 72509 23159286 ~ 23161818 (+)
G41099 ppp1r16b non-coding upstream 216062 23011482 ~ 23018265 (+)
G41126 NA non-coding downstream 724 23254942 ~ 23255527 (+)
G41207 NA non-coding downstream 26719 23280937 ~ 23281193 (+)
G41220 NA non-coding downstream 83115 23337333 ~ 23358085 (+)
G41231 NA non-coding downstream 113167 23367385 ~ 23368351 (+)
G41291 NA non-coding downstream 582480 23836698 ~ 23836903 (+)
itga7 itga7 other upstream 1241716 21950376 ~ 21992611 (+)
vgll4b vgll4 other upstream 1890616 21295102 ~ 21343711 (+)
G40353 rassf1,LOC102778369 other upstream 3085637 20148104 ~ 20148690 (+)
abhd14b abhd14b other upstream 3310778 19917889 ~ 19923549 (+)
cenps LOC103362653,LOC103137101,LOC103464519 other upstream 3374986 19851548 ~ 19859341 (+)
cbfa2t2 cbfa2t2 other downstream 480730 23734948 ~ 23771932 (+)
znfx1 NA other downstream 593829 23848047 ~ 23867512 (+)
bloc1s1 bloc1s1,LOC102796612 other downstream 1301307 24555525 ~ 24560318 (+)
slc12a5a LOC103355988 other downstream 1953938 25208156 ~ 25310553 (+)
slc16a1a slc16a1,LOC102208676,LOC102781600 other downstream 2428189 25682407 ~ 25690935 (+)

Expression


Co-expression Network