hemk1 (hemk1)


Basic Information

Item Value
gene id hemk1
gene name hemk1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 20161369 ~ 20167791 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797440.1
GCTTTCCATACGTCAACAGTTTGGAAAGGTTTGCTGCGCCATGTGAGCGCATTTGAGTAGCGTGccatccatagacagtatggtgcCATCCGGCTACAGAACATAATATATGTCCATTTAGGGCGATACAATCGAAAGTAACCTAGAATTTGAAGTGTACCAGGACAACAGTATACAGTAAGGATGCAGCGAGAACAGCTGATGGCTACCCAAATTAAGTTCCTCTAAATCTAAACGATTAATGATGTAAAGGAGGTTTGTTTAGATTAATCATGTGGAGAAGATCTCTGAGCGCAGGCTACAGATGCTTTGGCTGCAGGAGTGTTGGACCAAAGGGACTTTGGGGCTCCCATGCAGTGCATTCATGCAGCGCTCCAGCGTTACCAACAGGAGGTATCACAGCACTTGAAGCGGTCAATTTATGGAAGAGACACTTTGCAGAGAGAGGTGTGACGGAGCCAGACAACTCTAGCCATTACATCATTGCTTATCTGTTTGGGGCTAAAACTCTAGAAAGTCTTGATCAGAGGAGATTAACAGAGTTTCTCAGCCCAGAAAAAACAGAGCAGATGTGGAAGCTCTGCTCTAGACGCCTATCCAGAATGCCTGTGCAGTATGTGATTGAGGAGTGGGACTTCAGAGATCTGACACTGAAGATGAGACCTCCTGTGTTCATACCAAGACCTGAAACCGAGGAGTTGGTTGAACTCGTGCTCATTGATCTGGAGATGAAGCTGGGGACTGGAGCCGGTGCAGACGCCCAGCATACATGCTTGGAAGTGGGATGTGGCTCTGGTGCCATTTCTCTTAGTCTGCTGAAGAGTCTGCCTCAGCTCAAAGCCATTGCCCTGGATCAAAGCCAGGATGCAGTGGATTTAACAGGGGAGAATGCGTTAAGGTTGGGGCTTCAGGACCGATTACAGATTCATCATATAGATGTAATGAAAGATGCAGAAACTCTGTTGAGGCTCTGTAGTGATGTCTCAGCTTTGGTCAGTAACCCCCCGTACCTGTTCTCAGAGGATATGACAACGTTGGAACCTGAAATATTTCAATTTGAAGACCACGCTGCTTTAGATGGAGGTAAAGATGGCCTAAAAGTGATCAAACAGATTTTGACTCTGGCTCCACAGATCCTGTCAAACCATGGCTGTGTTTACTTGGAGGTGGACCCCAGACACCCCCTGCTCATTCAACGCTGGGTGGAGGCGAATGTGGAAGAGATGCATTATGTGGAGACACGACAGGACATCACAGGCAGGCCACGGTTCTGCATCCTTCGTAAAGAGAAGTCAAACAAGGAACACAAGCTGGATTTGGATTGAGAAACTGAGATCCTATTACACTGGCTTTAGCCCATGTCGCCACGACCTCAGCTCCCCTACCCCCCCTGAGCCGCCCAGCACGCGCTCTCACTGATTGGACCACTCAAAATTGAGAATTTGCAGAAGCTCAAATCATTTTCATGTCACTGTTGCACTTTTAATCTGCTAACGTGTGTGATCGTATTTTCACACAATAGCAAATGTGTGCGAGATGGCTATAAAGCAGGCTCAAAGCTGAAGGTAATTACCGAGACTTTTCTTAGAACCCTCCCTCTCAGAATCTCACCCTCCTCCCAGGAAGCATTCAGTAGTTCTGTGAATCTGCTGATGAACAGTCCTCCCCTTCGCTTGTTCACTCGCTGACTCAGATGCAGGCTGTACGCATTGTtgagcaaaaacacacagacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaatgtggcCTTTATTTCCTCACACACTTAAAGCTCAAAGGCCATAAAGTCTTTGTGTTTCAAAGGTGATTTGAAGTCCAAAATATTTCGTAACAACTGTACCCTGTGAGTAATACTGGCATTTTAAGAGAAATTGATTGAAAGGACAGCAAGTGAAACTCTAATTGGTtattttaatagaaaaatgtacatATGTAAAAGgtagaaaaaatgttttactgagaaaaataaaaaggcgcaaaagatGTC

Function

symbol description
hemk1 Predicted to enable nucleic acid binding activity and protein methyltransferase activity. Predicted to act upstream of or within protein methylation. Orthologous to human HEMK1 (HemK methyltransferase family member 1).

NR:

description
hemK methyltransferase family member 1 isoform X1

GO:

id name namespace
GO:0006479 protein methylation biological_process
GO:0008276 protein methyltransferase activity molecular_function

KEGG:

id description
K02493 hemK, prmC, HEMK; release factor glutamine methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797440.1 True 2056 mRNA 0.46 11 20161369 20167791

Neighbor

gene id symbol gene type direction distance location
si:ch211-161c3.5 calml6,c5h3orf18,clg5h3orf18,LOC104956351 coding upstream 272637 19877422 ~ 19888732 (+)
rbp7b rbp7,LOC104956357,LOC103362661 coding upstream 309840 19849826 ~ 19851529 (+)
h6pd h6pd coding upstream 314015 19839164 ~ 19847354 (+)
si:ch73-15b2.5 NA coding upstream 351505 19805357 ~ 19809864 (+)
ddi2 ddi2,LOC103362592 coding upstream 357212 19795354 ~ 19804157 (+)
glyctk glyctk coding downstream 19864 20187655 ~ 20195749 (+)
mon1bb NA coding downstream 30198 20197989 ~ 20203853 (+)
si:dkey-183j2.10 LOC104951540,LOC103362943 coding downstream 50775 20218566 ~ 20224017 (+)
ppcs ppcs coding downstream 333838 20501629 ~ 20504671 (+)
si:dkey-264d12.5 NA coding downstream 356436 20524227 ~ 20546846 (+)
G40357 NA non-coding upstream 3844 20156854 ~ 20157525 (+)
G40352 NA non-coding upstream 14386 20146735 ~ 20146983 (+)
G40339 NA non-coding upstream 39499 20068278 ~ 20121870 (+)
G40284 NA non-coding upstream 398871 19761173 ~ 19762498 (+)
G40182 NA non-coding upstream 786530 19374630 ~ 19374839 (+)
G40433 NA non-coding downstream 59546 20227337 ~ 20227816 (+)
G40442 NA non-coding downstream 98049 20265840 ~ 20266366 (+)
G40479 NA non-coding downstream 251349 20419140 ~ 20423496 (+)
G40488 NA non-coding downstream 324203 20491994 ~ 20531354 (+)
G40592 NA non-coding downstream 555431 20723222 ~ 20725950 (+)
G40353 rassf1,LOC102778369 other upstream 12679 20148104 ~ 20148690 (+)
abhd14b abhd14b other upstream 237820 19917889 ~ 19923549 (+)
cenps LOC103362653,LOC103137101,LOC103464519 other upstream 302028 19851548 ~ 19859341 (+)
sema3fa LOC103360486,LOC102793610,LOC100701195,LOC102213718,LOC102288772,LOC101468868 other upstream 419980 19687671 ~ 19741389 (+)
LOC120557344 LOC104966310 other upstream 528850 19617181 ~ 19632519 (+)
vgll4b vgll4 other downstream 1127311 21295102 ~ 21343711 (+)
itga7 itga7 other downstream 1782585 21950376 ~ 21992611 (+)
cbfa2t2 cbfa2t2 other downstream 3567157 23734948 ~ 23771932 (+)
znfx1 NA other downstream 3680256 23848047 ~ 23867512 (+)
bloc1s1 bloc1s1,LOC102796612 other downstream 4387734 24555525 ~ 24560318 (+)

Expression


Co-expression Network