cttnbp2nla (cttnbp2nl,LOC102311171,LOC100709543)



Basic Information


Item Value
gene id cttnbp2nla
gene name cttnbp2nl,LOC102311171,LOC100709543
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 23473348 ~ 23487987 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039797464.1
CAGTTAAACACTGCCTGGCCGCTAACTGTTTCGCTGCATCGGGATCAGAGGACGAAAATCAAGTGAAACAAATCTCCTGACAGGAGAAAAGTTCATGCTGGAGTTTTCAAAGACCTCAGAGGGCCTTATGAAGTCCAAGCTGAATATGGAGAATTTGACCAAGCCAGAGTTGCTGATGCTTTTCAGCATCCTGGAAGGAGAGCTGGAGGCCCGGGACCTGGTCATTGATACCCTAAAGGCCCAGCGTAAAGAGCTGTTTATCCAGGAGCGCTATGGCAGGTACAACCTCAGCGACCCCTTCCTGGCCTTGCAGAGGGACAGTGAGATTGTCGGGGACCAGAACAAGGACCCGGGCTGTTCCTCCCCCACCTCCAACCCTCTGGTGGTTCTCAAACTGGTGGTGAGCCACTGCAGGAGGATGCAGGAGAAGATGTTGGCCCAGCTGGCTGCAGCGGAAAGCAGGCACAGAAGGGTCATTGCAGATCTGGAGGAGGAACAGAGGAGGCACGCTGAGGACACTGCCGAGGGAGATGATGTCACTTACATcctggagaaagagagggagcgctTACAACAACAGCTGGAGTTTGAGCGGAGTCAGGTCCGGCGGTTGGAAAAAGAACAGCGTCGGATTACTGACCAGCTAGAAGAAGAACGGGCTCAGCACAAACAGCTCTCCTGCGCTTTGGCCAAAGAGTGCAAGTGGGCAAGTGCCAGGGCTCTAGAGGAGGGTCACCGGCTGACGGAGCTGAGCCGTAAACTTGACAAGGAGAAGGAGGCTTGTCAGGCACTGAGAAACGAGCTGGAGGATGAGAGGAGGCGAGCTCTGAGAATGGAGGCCAGGGTGGAGGAGCAGCTGGCCGAGTTTGACACGGAGCGAGAGCAGCTCCGCTCACGTCTGAAGAAGGAGGAAGCTCACTGCTATCAGCTACAACAACAGGTAGAGGAGCTGAAGAGGACGCTGGTAGAGGTGAATATGATGAGAGATGTTAGGGAGGCAGTTACAGCTCCAGTAGAGGCAGTAGGAAAGGAGTGGGCCACGAAAGTTCCTCCAGCAAAGACAGCAGTAGACAGTATTACGGTGGAGGACGTTGAGGAAGACCTAAACCCGCAACCTGTGCAGCCAAAAGTCAACGGTCACCACTGTCCTATGGAGACCAATGAGCACCACGGCCCAAACAACGCCCTCCCAGATAACATCATTGTACAGAATGGGAATGAGAATTCTCCAATTCATCAGAGCCAGACATCATTCTCCCCCTGCAGTGCCACCCCCTCcactcttcctccttcctccccaTGTGCTTCGCCTGTCCTTGCGAAACGCCCACCAGGCAGCCCGAGCCCTGGCAGCTACCAGTCTCCCTACCAGGCCGGGATCAACCAGCGCTTCCACGCTGCTCGTCACCGGTTCCAGGGTACCATTGACCCAGAGCCTCCGTCCCAGGCCACACAGCCTGCTCTCCCCCTCTCACCAAAGGATGTCTCCCCTGTGACCAGCAGCTCGTCCCTAGAAGCCAGCCCAGTCAAGCAGATGGCCCGCAGCACAGTCACTCAAGTCCTGTCTCGCTTCACCACCGTACAGCAGAGCGCCACACCGAAGCTCGCCACACCGAACAATTCACCCTTCGGTACAGACTACCGCAGCCTGGCAGCGCCTTTGTCTCCAGTCATCGGAAGGGCCGCAGGAGCACTTCCGCAGGGGATCCGATCACCCACTATCCCCAGGGCAGACAGGGGCAACCCTCCACCCATCCCCCCTAAGAAGCCCGGTCTGGCCCAGGCCCCTCCCTCCCCGGCAGCAGTGCCCAGGTCTGCCAGCCACTTCTCTGACAGCCCCCTCTCTGCCAGCTGTGGCCTCACCTCCAGCCAGGAGGGAGTCAAAGAACTGGACATGGTGGTTTCTTCTAACTAACTGATCATTTGATTGGTCAATGAATGAgttagctgctgctctgcttgtGACACGATGGTTGAATCCACATCTCATAATCATGATTGTTGAGATATTGTTTTGTACATGACAGGATTTATATGATGTGCTTATTTGAACAGAGGTCCCTTCAAACACTgttataattgtatttattaaatTTGTTTTGGTATGCGCTGAGGCACTATTTTAGATAGTGGTTAAAGAGCTGGTACTAGTGAAGAGTTACAACTGATAGTTTGAGTTTCAAATTAGGGTTGTGCGATATTGAAATCCCCTCTACTGACGATATAACTTTAACAACGATATAAGAAATTATCGTcccaaaaacaatataaatatcTATTGACTGGAGactcatacagtacagtatgttgcaATACCCATAAGTGGACAATGTATAGGCAGTAAACGCTATTTTACAAAAGGGCATGCAGAGATCAATGAATCAAATCAATCAACCGGTTATTTTATTCAGTAACGCATTTATCAACATTGATGTTTGGAATGAGGATAACAGATACAGTTATCGCGGCCAACCAATATGCGTTAAAAGATAATCTCATCATATCACCCAGCCTATTTCAAATGTGCCGATACTGTATGTTGGGCACACCCTACTGTTATGGTatatttagtctttttttatggTATCATATTTCCAAAGAATACAAATCAGTTTATCACCTGAAGAGGTATTATGTTTCTCTAGTATGTTGCTCGTTATTACAACAAATACTGTAATCTTCAGACCAAATGTAACAAGTAGTCCTTGGACCAATGTATGTCTCATTTCATGTCTTGTGTATATGGACATAGCGgtcgtttttataaaaatgtatagttCATTTTATAAATGTTCCTTAGTTATTAATGTATAATAGTTTTACACAACAGGTAATCTAATCAGTGTTGTACTGAGCTTTGTTCATGTATTACTTTAATGTTGCATTGTTATGATAATCTTAAGGCTCAGAATGTATGCAGGTGCCATTGTACTCTTCTAAGGATTAGTGATTCTGATGAATGTCATGTCTTTGTCATTTATAAGAAATCATTATAAAACACTCAAGTATGTTTTAGTCAACCATGGCTTTGATTAATTTCATAACAACTGTTGTGTTGGTTATCTCTACTTTTTAATCAGATCCTTTACAGTACTTTAAATGCTGGGAAGTGAtggataaaataaatgaatcccAAAGTT
>XM_039797466.1
ACACTGCCTGGCCGCTAACTGTTTCGCTGCATCGGGATCAGAGGACGAAAATCAAGTGAAACAAATCTCCTGACAGGAGAAAAGTTCATGCTGGAGTTTTCAAAGACCTCAGAGGGCCTTATGAAGGCCCAGCGTAAAGAGCTGTTTATCCAGGAGCGCTATGGCAGGTACAACCTCAGCGACCCCTTCCTGGCCTTGCAGAGGGACAGTGAGATTGTCGGGGACCAGAACAAGGACCCGGGCTGTTCCTCCCCCACCTCCAACCCTCTGGTGGTTCTCAAACTGGTGGTGAGCCACTGCAGGAGGATGCAGGAGAAGATGTTGGCCCAGCTGGCTGCAGCGGAAAGCAGGCACAGAAGGGTCATTGCAGATCTGGAGGAGGAACAGAGGAGGCACGCTGAGGACACTGCCGAGGGAGATGATGTCACTTACATcctggagaaagagagggagcgctTACAACAACAGCTGGAGTTTGAGCGGAGTCAGGTCCGGCGGTTGGAAAAAGAACAGCGTCGGATTACTGACCAGCTAGAAGAAGAACGGGCTCAGCACAAACAGCTCTCCTGCGCTTTGGCCAAAGAGTGCAAGTGGGCAAGTGCCAGGGCTCTAGAGGAGGGTCACCGGCTGACGGAGCTGAGCCGTAAACTTGACAAGGAGAAGGAGGCTTGTCAGGCACTGAGAAACGAGCTGGAGGATGAGAGGAGGCGAGCTCTGAGAATGGAGGCCAGGGTGGAGGAGCAGCTGGCCGAGTTTGACACGGAGCGAGAGCAGCTCCGCTCACGTCTGAAGAAGGAGGAAGCTCACTGCTATCAGCTACAACAACAGGTAGAGGAGCTGAAGAGGACGCTGGTAGAGGTGAATATGATGAGAGATGTTAGGGAGGCAGTTACAGCTCCAGTAGAGGCAGTAGGAAAGGAGTGGGCCACGAAAGTTCCTCCAGCAAAGACAGCAGTAGACAGTATTACGGTGGAGGACGTTGAGGAAGACCTAAACCCGCAACCTGTGCAGCCAAAAGTCAACGGTCACCACTGTCCTATGGAGACCAATGAGCACCACGGCCCAAACAACGCCCTCCCAGATAACATCATTGTACAGAATGGGAATGAGAATTCTCCAATTCATCAGAGCCAGACATCATTCTCCCCCTGCAGTGCCACCCCCTCcactcttcctccttcctccccaTGTGCTTCGCCTGTCCTTGCGAAACGCCCACCAGGCAGCCCGAGCCCTGGCAGCTACCAGTCTCCCTACCAGGCCGGGATCAACCAGCGCTTCCACGCTGCTCGTCACCGGTTCCAGGGTACCATTGACCCAGAGCCTCCGTCCCAGGCCACACAGCCTGCTCTCCCCCTCTCACCAAAGGATGTCTCCCCTGTGACCAGCAGCTCGTCCCTAGAAGCCAGCCCAGTCAAGCAGATGGCCCGCAGCACAGTCACTCAAGTCCTGTCTCGCTTCACCACCGTACAGCAGAGCGCCACACCGAAGCTCGCCACACCGAACAATTCACCCTTCGGTACAGACTACCGCAGCCTGGCAGCGCCTTTGTCTCCAGTCATCGGAAGGGCCGCAGGAGCACTTCCGCAGGGGATCCGATCACCCACTATCCCCAGGGCAGACAGGGGCAACCCTCCACCCATCCCCCCTAAGAAGCCCGGTCTGGCCCAGGCCCCTCCCTCCCCGGCAGCAGTGCCCAGGTCTGCCAGCCACTTCTCTGACAGCCCCCTCTCTGCCAGCTGTGGCCTCACCTCCAGCCAGGAGGGAGTCAAAGAACTGGACATGGTGGTTTCTTCTAACTAACTGATCATTTGATTGGTCAATGAATGAgttagctgctgctctgcttgtGACACGATGGTTGAATCCACATCTCATAATCATGATTGTTGAGATATTGTTTTGTACATGACAGGATTTATATGATGTGCTTATTTGAACAGAGGTCCCTTCAAACACTgttataattgtatttattaaatTTGTTTTGGTATGCGCTGAGGCACTATTTTAGATAGTGGTTAAAGAGCTGGTACTAGTGAAGAGTTACAACTGATAGTTTGAGTTTCAAATTAGGGTTGTGCGATATTGAAATCCCCTCTACTGACGATATAACTTTAACAACGATATAAGAAATTATCGTcccaaaaacaatataaatatcTATTGACTGGAGactcatacagtacagtatgttgcaATACCCATAAGTGGACAATGTATAGGCAGTAAACGCTATTTTACAAAAGGGCATGCAGAGATCAATGAATCAAATCAATCAACCGGTTATTTTATTCAGTAACGCATTTATCAACATTGATGTTTGGAATGAGGATAACAGATACAGTTATCGCGGCCAACCAATATGCGTTAAAAGATAATCTCATCATATCACCCAGCCTATTTCAAATGTGCCGATACTGTATGTTGGGCACACCCTACTGTTATGGTatatttagtctttttttatggTATCATATTTCCAAAGAATACAAATCAGTTTATCACCTGAAGAGGTATTATGTTTCTCTAGTATGTTGCTCGTTATTACAACAAATACTGTAATCTTCAGACCAAATGTAACAAGTAGTCCTTGGACCAATGTATGTCTCATTTCATGTCTTGTGTATATGGACATAGCGgtcgtttttataaaaatgtatagttCATTTTATAAATGTTCCTTAGTTATTAATGTATAATAGTTTTACACAACAGGTAATCTAATCAGTGTTGTACTGAGCTTTGTTCATGTATTACTTTAATGTTGCATTGTTATGATAATCTTAAGGCTCAGAATGTATGCAGGTGCCATTGTACTCTTCTAAGGATTAGTGATTCTGATGAATGTCATGTCTTTGTCATTTATAAGAAATCATTATAAAACACTCAAGTATGTTTTAGTCAACCATGGCTTTGATTAATTTCATAACAACTGTTGTGTTGGTTATCTCTACTTTTTAATCAGATCCTTTACAGTACTTTAAATGCTGGGAAGTGAtggataaaataaatgaatcccAAAGTT

Function


symbol description
cttnbp2nl Enables protein phosphatase 2A binding activity. Acts upstream of or within negative regulation of transmembrane transport; negative regulation of transporter activity; and protein dephosphorylation. Located in actin cytoskeleton.

NR:

description
CTTNBP2 N-terminal-like protein

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039797464.1 True 3140 mRNA 0.48 7 23473348 23487987
XM_039797466.1 False 3028 mRNA 0.48 6 23473355 23487987
Loading

Neighbor


gene id symbol gene type direction distance location
LOC120557228 rap1b,rap1a,rap1ab,LOC105901888,LOC106566052,LOC107560426,LOC107742898 coding upstream 166282 23282142 ~ 23307066 (+)
timm17a timm17a,LOC102789540 coding upstream 192619 23274429 ~ 23280729 (+)
lmod1b lmod1 coding upstream 201793 23266849 ~ 23271555 (+)
shisa4 shisa4,LOC102788956 coding upstream 207485 23256518 ~ 23265863 (+)
ipo9 ipo9 coding upstream 219130 23234327 ~ 23254218 (+)
LOC120557289 wnt2b,LOC104945808 coding downstream 5765 23493752 ~ 23504705 (+)
tox2 tox2,LOC104948894,LOC108231505 coding downstream 83615 23571602 ~ 23665613 (+)
rbck1 rbck1 coding downstream 337739 23825726 ~ 23835968 (+)
LOC120558070 cdh22 coding downstream 484406 23972393 ~ 24165819 (+)
gcnt7 gcnt7,LOC102795321,LOC102207891 coding downstream 953325 24441312 ~ 24449369 (+)
G41231 NA non-coding upstream 104997 23367385 ~ 23368351 (+)
G41220 NA non-coding upstream 115263 23337333 ~ 23358085 (+)
G41207 NA non-coding upstream 192155 23280937 ~ 23281193 (+)
G41126 NA non-coding upstream 217821 23254942 ~ 23255527 (+)
LOC120557222 NA non-coding upstream 240390 23232172 ~ 23232958 (+)
G41291 NA non-coding downstream 348711 23836698 ~ 23836903 (+)
G41308 NA non-coding downstream 358806 23846793 ~ 23847938 (+)
LOC120556870 NA non-coding downstream 380384 23868371 ~ 23870584 (+)
G41346 NA non-coding downstream 788073 24276060 ~ 24276910 (+)
G41354 NA non-coding downstream 931214 24419201 ~ 24421883 (+)
itga7 itga7 other upstream 1480737 21950376 ~ 21992611 (+)
vgll4b vgll4 other upstream 2129637 21295102 ~ 21343711 (+)
G40353 rassf1,LOC102778369 other upstream 3324658 20148104 ~ 20148690 (+)
abhd14b abhd14b other upstream 3549799 19917889 ~ 19923549 (+)
cenps LOC103362653,LOC103137101,LOC103464519 other upstream 3614007 19851548 ~ 19859341 (+)
cbfa2t2 cbfa2t2 other downstream 246961 23734948 ~ 23771932 (+)
znfx1 NA other downstream 360060 23848047 ~ 23867512 (+)
bloc1s1 bloc1s1,LOC102796612 other downstream 1067538 24555525 ~ 24560318 (+)
slc12a5a LOC103355988 other downstream 1720169 25208156 ~ 25310553 (+)
slc16a1a slc16a1,LOC102208676,LOC102781600 other downstream 2194420 25682407 ~ 25690935 (+)

Expression


cttnbp2nla(cttnbp2nl,LOC102311171,LOC100709543) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
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cttnbp2nla(cttnbp2nl,LOC102311171,LOC100709543) Expression in each Bioproject

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cttnbp2nla(cttnbp2nl,LOC102311171,LOC100709543) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 125.
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Co-expression Network