aggf1 (aggf1)


Basic Information

Item Value
gene id aggf1
gene name aggf1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 11219389 ~ 11226582 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797527.1
ATGTTATCGTCTTCAGTTAAACTAATGGAGAATGAAGATGGAGAAAGGGACACGGAGTCTGAAGAGGCTGAGCTCCGTCTGAAAGTAGAGTCGTTGAAGCATGAGCTCCACGAGTGCAGAGCCGAGCTGACCAAGTTACAGAAACAACTGAACCAGTCCGAAAGACTGCAGAGGAGCACAGAGAGCTACAACGAAGACCTGAGGAAACAAGTTGACCATCTGAGTGCAGAGATTCATGACCGGAAGAAGAAAGATAAAGACAGAGTCGACAGTGAAACTcagacagaagaaaatgtaTGGACAGAAACTGAGTATTACAACTACTACTATGGAGGCTACTCTCAGAACCCAGACACTACAGACGGCCTGAACACAGTAGCAGCAGTGGATGCAGCTAATGGCAGCGAGGCCGCAGAGGTTTCAGCACCAAATGAAGCAGCTGCTGCTAACCCTCCCACTGACGACAGTGTTGCAGTCACAACAGAGgatggtgatggaggatccATAGCGGATATGTTGAGGGCCACTGCTGAAGAGGCAATGACACAGACTGGGTTTGTCTTCGATGAGACTACTGGAATGTACTATGACCACAGCACGGGCTTCTACTACGACTCGGCCAGTCAATTATACTATGATGCCAACACAGGCATTTACTACTACTATGATGCAGAGAGTGGGCGATACCAATTTCATTCCAGGATTGAGGTGCCTGCTGCAGAGCCTTGCCATGACAAGAGCACTGGTGAAAAGAAGGGCAAAAAGTTTAAGAAAGGGTCCAAGAAAATCTCACACCAGGATGATAAGGAAATCATATTTGATGAGGTACAgttggaagaagaagaaatggacTGGGTCGAAAAGCCAACAGCTAAGAGGACCACAGAATCCCGAAAACTGAAGCGAAAGTCTCGCAGTCCCGAAGTGGCTCCCCGTAGAAAAGACTCTTCTAAACATAAAGAGGTTAGCGGCAAATCTTTGTCAAAGAGGAAGAAGCAGAAAACCGGTTCACACGATGATGATAAGGATGATAAGGACAAAGGTAGATCaaggaagaaaaggaagaaatcCAAGTCAAAaaagcagaagaagaaaaagcgtCCGGTTCGGAGCAATGACTCAGAGGGGAACAGCGAACCGGAAGAGGGTGAGATTACAGAGTCGGAAAGAGAGGAGTGGGGGTCCACTCCCTCGTTCTCATCATCTTCTAGCTCCAGCTCCAAGGAAAGCCCAGAGTCAGAAATGGAGACTCAGAGTCATGAAGTCACAGACATTTGGCCGCCCTGTGTAAGAGTGACAGTGGTCAGATCTCCAGTGCTGCAGGTGGGCACTCTGTTCATCATCACAGCTGACTCTCGAGCCACCGTTGGCAGAGAGAAAGATATGGACCATGCAATCCGAATACCAGAAATGGGAGTCAGCAAGTTCCATGCAGAGGTGTACTTTGACCAGGATCAGCAGAGCTACATGCTGGTGGACCAGGGAAGCCAGAATGGAACAGTCATCAATGGCAACAGGATCTTGCAGCCTAAAACCAAATGTGAGCCACATGCGCTGATGCACGGTGATGAGGTGAAGATGGGAGAGACCGTGCTGTCCTTCCATATCCACTCGGGCACTGATACCTGCGATGGCTGTGAGCCTGGTCAGGTGATGGCTCACCTCAGCAAGCACAGGAGGGAGGAGAATACTGCAGGCCCTGCTCTCACCAAAGAGGATAAAGAAGCACTGAGACAAAAGGAACTGAAGCAGATGAAGGCCAAATATGGTCTGCAGAGCAGTGAGTATGAGGAGGCCAAAGCCCTGAGGAACCCCAGATACCAGGACCGAGCAGAGTCTCGACGACAGACGGTGGGCAGCGAGGGCGTTTTCCAACGAGATGATGCGCCTGCTTCTGTTCATCAGGAGATCAGCGAAGTCAATAAAGGACGGAAAATGCTGGAAAAGATGGGctggaagagaggagagggccTGGGTAAAGAGGGAACTGGAAGAAAAGACCCGGTTGAACTGAAAATCAGGAAGTCCCATTCAGGTTTGGGGGCTGGTGGTGCCATGTCTCTGGACAGCGTCTCTATGACCAAATCAAAGTCCCAGAAGAACTGGGAAAAAGCGCGCGAGAGATTTGCTGATTCGTGCCAGCCTGACATGCTGTCTCCTAAAACGCAGAAGAACAAGTCGCCCAAAGCCTGGGTCCGAGGAGAAGAGACTGAGGCTACAAACACACAAGCAGGTGGTGATGCAGAcggccaaaattaggaatacgTGCGAGAGAATATACTGTGGATTTAAAAGCTGGGAGGCTTGATGCGTATCTCTCTCCTGTCAAAGGAAATGTGATATACTGTCTGTAAATTGACAGAGCTGCCACTGTGCCTCCCAGAACAAAAGGATATGGAAAGGAAAATGAATCGCCTCGAGCAAATATTGACACAGTGAAGCTATATTTCTCACAATGAGATCATGCTATGACAAGACAACTGTGGATCTGTAACTGAGACAATCCTGTAACTGATCATGTTAAACCAGTTGCAACTTTTTGGTGTAATAGTGCCCCT
>XM_039797528.1
TACTTCCGTTGTGACGTATTAACAAGTAGTAAATGGCGGTTGCGAACAGGGTGGACAGTAAACATTACCACGGTTATAACTGTCGGTTCATGTGTCGTGCTGACAGGGAATTCACTGCCAAAGAGACGGAAGCGACGCAAACGTTAAACTAATGGAGAATGAAGATGGAGAAAGGGACACGGAGTCTGAAGAGGCTGAGCTCCGTCTGAAAGTAGAGTCGTTGAAGCATGAGCTCCACGAGTGCAGAGCCGAGCTGACCAAGTTACAGAAACAACTGAACCAGTCCGAAAGACTGCAGAGGAGCACAGAGAGCTACAACGAAGACCTGAGGAAACAAGTTGACCATCTGAGTGCAGAGATTCATGACCGGAAGAAGAAAGATAAAGACAGAGTCGACAGTGAAACTcagacagaagaaaatgtaTGGACAGAAACTGAGTATTACAACTACTACTATGGAGGCTACTCTCAGAACCCAGACACTACAGACGGCCTGAACACAGTAGCAGCAGTGGATGCAGCTAATGGCAGCGAGGCCGCAGAGGTTTCAGCACCAAATGAAGCAGCTGCTGCTAACCCTCCCACTGACGACAGTGTTGCAGTCACAACAGAGgatggtgatggaggatccATAGCGGATATGTTGAGGGCCACTGCTGAAGAGGCAATGACACAGACTGGGTTTGTCTTCGATGAGACTACTGGAATGTACTATGACCACAGCACGGGCTTCTACTACGACTCGGCCAGTCAATTATACTATGATGCCAACACAGGCATTTACTACTACTATGATGCAGAGAGTGGGCGATACCAATTTCATTCCAGGATTGAGGTGCCTGCTGCAGAGCCTTGCCATGACAAGAGCACTGGTGAAAAGAAGGGCAAAAAGTTTAAGAAAGGGTCCAAGAAAATCTCACACCAGGATGATAAGGAAATCATATTTGATGAGGTACAgttggaagaagaagaaatggacTGGGTCGAAAAGCCAACAGCTAAGAGGACCACAGAATCCCGAAAACTGAAGCGAAAGTCTCGCAGTCCCGAAGTGGCTCCCCGTAGAAAAGACTCTTCTAAACATAAAGAGGTTAGCGGCAAATCTTTGTCAAAGAGGAAGAAGCAGAAAACCGGTTCACACGATGATGATAAGGATGATAAGGACAAAGGTAGATCaaggaagaaaaggaagaaatcCAAGTCAAAaaagcagaagaagaaaaagcgtCCGGTTCGGAGCAATGACTCAGAGGGGAACAGCGAACCGGAAGAGGGTGAGATTACAGAGTCGGAAAGAGAGGAGTGGGGGTCCACTCCCTCGTTCTCATCATCTTCTAGCTCCAGCTCCAAGGAAAGCCCAGAGTCAGAAATGGAGACTCAGAGTCATGAAGTCACAGACATTTGGCCGCCCTGTGTAAGAGTGACAGTGGTCAGATCTCCAGTGCTGCAGGTGGGCACTCTGTTCATCATCACAGCTGACTCTCGAGCCACCGTTGGCAGAGAGAAAGATATGGACCATGCAATCCGAATACCAGAAATGGGAGTCAGCAAGTTCCATGCAGAGGTGTACTTTGACCAGGATCAGCAGAGCTACATGCTGGTGGACCAGGGAAGCCAGAATGGAACAGTCATCAATGGCAACAGGATCTTGCAGCCTAAAACCAAATGTGAGCCACATGCGCTGATGCACGGTGATGAGGTGAAGATGGGAGAGACCGTGCTGTCCTTCCATATCCACTCGGGCACTGATACCTGCGATGGCTGTGAGCCTGGTCAGGTGATGGCTCACCTCAGCAAGCACAGGAGGGAGGAGAATACTGCAGGCCCTGCTCTCACCAAAGAGGATAAAGAAGCACTGAGACAAAAGGAACTGAAGCAGATGAAGGCCAAATATGGTCTGCAGAGCAGTGAGTATGAGGAGGCCAAAGCCCTGAGGAACCCCAGATACCAGGACCGAGCAGAGTCTCGACGACAGACGGTGGGCAGCGAGGGCGTTTTCCAACGAGATGATGCGCCTGCTTCTGTTCATCAGGAGATCAGCGAAGTCAATAAAGGACGGAAAATGCTGGAAAAGATGGGctggaagagaggagagggccTGGGTAAAGAGGGAACTGGAAGAAAAGACCCGGTTGAACTGAAAATCAGGAAGTCCCATTCAGGTTTGGGGGCTGGTGGTGCCATGTCTCTGGACAGCGTCTCTATGACCAAATCAAAGTCCCAGAAGAACTGGGAAAAAGCGCGCGAGAGATTTGCTGATTCGTGCCAGCCTGACATGCTGTCTCCTAAAACGCAGAAGAACAAGTCGCCCAAAGCCTGGGTCCGAGGAGAAGAGACTGAGGCTACAAACACACAAGCAGGTGGTGATGCAGAcggccaaaattaggaatacgTGCGAGAGAATATACTGTGGATTTAAAAGCTGGGAGGCTTGATGCGTATCTCTCTCCTGTCAAAGGAAATGTGATATACTGTCTGTAAATTGACAGAGCTGCCACTGTGCCTCCCAGAACAAAAGGATATGGAAAGGAAAATGAATCGCCTCGAGCAAATATTGACACAGTGAAGCTATATTTCTCACAATGAGATCATGCTATGACAAGACAACTGTGGATCTGTAACTGAGACAATCCTGTAACTGATCATGTTAAACCAGTTGCAACTTTTTGGTGTAATAGTGCCCCT
>XM_039797530.1
ACAAGTAGTAAATGGCGGTTGCGAACAGGGTGGACAGTAAACATTACCACGGTTATAACTGTAACGTTAACTGTCTAATTATCATCAAAACATGTACTCGAGTGTGTCGGAAATACAGGGTAGttacaaaatgtttattttcaacTTTCAGGTCGGTTCATGTGTCGTGCTGACAGGGAATTCACTGCCAAAGAGACGGAAGCGACGCAAACGTTAAACTAATGGAGAATGAAGATGGAGAAAGGGACACGGAGTCTGAAGAGGCTGAGCTCCGTCTGAAAGTAGAGTCGTTGAAGCATGAGCTCCACGAGTGCAGAGCCGAGCTGACCAAGTTACAGAAACAACTGAACCAGTCCGAAAGACTGCAGAGGAGCACAGAGAGCTACAACGAAGACCTGAGGAAACAAGTTGACCATCTGAGTGCAGAGATTCATGACCGGAAGAAGAAAGATAAAGACAGAGTCGACAGTGAAACTcagacagaagaaaatgtaTGGACAGAAACTGAGTATTACAACTACTACTATGGAGGCTACTCTCAGAACCCAGACACTACAGACGGCCTGAACACAGTAGCAGCAGTGGATGCAGCTAATGGCAGCGAGGCCGCAGAGGTTTCAGCACCAAATGAAGCAGCTGCTGCTAACCCTCCCACTGACGACAGTGTTGCAGTCACAACAGAGgatggtgatggaggatccATAGCGGATATGTTGAGGGCCACTGCTGAAGAGGCAATGACACAGACTGGGTTTGTCTTCGATGAGACTACTGGAATGTACTATGACCACAGCACGGGCTTCTACTACGACTCGGCCAGTCAATTATACTATGATGCCAACACAGGCATTTACTACTACTATGATGCAGAGAGTGGGCGATACCAATTTCATTCCAGGATTGAGGTGCCTGCTGCAGAGCCTTGCCATGACAAGAGCACTGGTGAAAAGAAGGGCAAAAAGTTTAAGAAAGGGTCCAAGAAAATCTCACACCAGGATGATAAGGTGCAAGAGGTGACTAACTCATTGGCTAAAATGAAGATTTCTTCTTACTGGAATACTGCTTCCCACAGAGTCACAGACATTTGGCCGCCCTGTGTAAGAGTGACAGTGGTCAGATCTCCAGTGCTGCAGGTGGGCACTCTGTTCATCATCACAGCTGACTCTCGAGCCACCGTTGGCAGAGAGAAAGATATGGACCATGCAATCCGAATACCAGAAATGGGAGTCAGCAAGTTCCATGCAGAGGTGTACTTTGACCAGGATCAGCAGAGCTACATGCTGGTGGACCAGGGAAGCCAGAATGGAACAGTCATCAATGGCAACAGGATCTTGCAGCCTAAAACCAAATGTGAGCCACATGCGCTGATGCACGGTGATGAGGTGAAGATGGGAGAGACCGTGCTGTCCTTCCATATCCACTCGGGCACTGATACCTGCGATGGCTGTGAGCCTGGTCAGGTGATGGCTCACCTCAGCAAGCACAGGAGGGAGGAGAATACTGCAGGCCCTGCTCTCACCAAAGAGGATAAAGAAGCACTGAGACAAAAGGAACTGAAGCAGATGAAGGCCAAATATGGTCTGCAGAGCAGTGAGTATGAGGAGGCCAAAGCCCTGAGGAACCCCAGATACCAGGACCGAGCAGAGTCTCGACGACAGACGGTGGGCAGCGAGGGCGTTTTCCAACGAGATGATGCGCCTGCTTCTGTTCATCAGGAGATCAGCGAAGTCAATAAAGGACGGAAAATGCTGGAAAAGATGGGctggaagagaggagagggccTGGGTAAAGAGGGAACTGGAAGAAAAGACCCGGTTGAACTGAAAATCAGGAAGTCCCATTCAGGTTTGGGGGCTGGTGGTGCCATGTCTCTGGACAGCGTCTCTATGACCAAATCAAAGTCCCAGAAGAACTGGGAAAAAGCGCGCGAGAGATTTGCTGATTCGTGCCAGCCTGACATGCTGTCTCCTAAAACGCAGAAGAACAAGTCGCCCAAAGCCTGGGTCCGAGGAGAAGAGACTGAGGCTACAAACACACAAGCAGGTGGTGATGCAGAcggccaaaattaggaatacgTGCGAGAGAATATACTGTGGATTTAAAAGCTGGGAGGCTTGATGCGTATCTCTCTCCTGTCAAAGGAAATGTGATATACTGTCTGTAAATTGACAGAGCTGCCACTGTGCCTCCCAGAACAAAAGGATATGGAAAGGAAAATGAATCGCCTCGAGCAAATATTGACACAGTGAAGCTATATTTCTCACAATGAGATCATGCTATGACAAGACAACTGTGGATCTGTAACTGAGACAATCCTGTAACTGATCATGTTAAACCAGTTGCAACTTTTTGGTGTAATAGTGCCCCT

Function

symbol description
aggf1 Predicted to enable nucleic acid binding activity. Acts upstream of or within blood vessel development; hemangioblast cell differentiation; and positive regulation of protein kinase B signaling. Is expressed in several structures, including blastomere; brain; cardiovascular system; head; and liver. Orthologous to human AGGF1 (angiogenic factor with G-patch and FHA domains 1).

NR:

description
angiogenic factor with G patch and FHA domains 1-like isoform X1

GO:

id name namespace
GO:0001525 angiogenesis biological_process
GO:0001570 vasculogenesis biological_process
GO:0051897 positive regulation of protein kinase B signaling biological_process
GO:0060841 venous blood vessel development biological_process
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797527.1 False 2558 mRNA 0.49 14 11219994 11226582
XM_039797528.1 True 2685 mRNA 0.49 16 11219389 11226582
XM_039797530.1 False 2368 mRNA 0.48 15 11219410 11226582

Neighbor

gene id symbol gene type direction distance location
r3hcc1 LOC104945372 coding upstream 51583 11156708 ~ 11167806 (+)
LOC120556881 LOC106956972,LOC106927802,LOC104927944,LOC102076673,LOC103366911 coding upstream 62975 11153550 ~ 11156414 (+)
rplp0 rplp0,LOC102776933 coding upstream 67103 11149713 ~ 11152286 (+)
LOC120556879 pxn,LOC107385500,LOC103366908 coding upstream 71947 11115242 ~ 11147442 (+)
myl2a LOC104927948,LOC103386220,LOC103366907,LOC100699907 coding upstream 115728 11100133 ~ 11103661 (+)
LOC120558172 LOC104927939,LOC104961953,LOC100699369,LOC102798792,LOC103359250 coding downstream 10125 11236707 ~ 11243365 (+)
LOC120558115 NA coding downstream 36928 11263510 ~ 11266070 (+)
msx1a msx1 coding downstream 103974 11330556 ~ 11332646 (+)
LOC120557333 evc coding downstream 134824 11361406 ~ 11375812 (+)
LOC120557335 LOC103359258,LOC101476783 coding downstream 149953 11376535 ~ 11382180 (+)
G37383 fam219a non-coding upstream 275763 10936683 ~ 10943626 (+)
LOC120557560 NA non-coding upstream 290002 10928477 ~ 10929387 (+)
G37370 kiaa1161,LOC103376128 non-coding upstream 303590 10910297 ~ 10915799 (+)
G37367 NA non-coding upstream 421965 10796979 ~ 10797424 (+)
G37363 NA non-coding upstream 558065 10660866 ~ 10661324 (+)
G37521 NA non-coding downstream 118158 11344740 ~ 11345059 (+)
G37522 NA non-coding downstream 120504 11347086 ~ 11347671 (+)
G37523 NA non-coding downstream 122554 11349136 ~ 11349368 (+)
G37524 evc2 non-coding downstream 122968 11349550 ~ 11349773 (+)
G37526 NA non-coding downstream 127694 11354276 ~ 11354743 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other upstream 206480 10997230 ~ 11012909 (+)
glrx glrx other upstream 823202 10387908 ~ 10396187 (+)
G37197 NA other upstream 909393 10305187 ~ 10309996 (+)
prickle2b prickle2 other upstream 1362733 9760233 ~ 9856656 (+)
G36744 NA other upstream 2990669 8227762 ~ 8228720 (+)
G37525 evc2 other downstream 125496 11352078 ~ 11352387 (+)
LOC120557336 LOC103359259,LOC100704408,LOC101476502,LOC102796717,LOC102216118 other downstream 158602 11385184 ~ 11394398 (+)
G37597 NA other downstream 553596 11780178 ~ 11805394 (+)
G37714 NA other downstream 1026484 12253066 ~ 12254974 (+)
LOC120557851 krt18,LOC105931717,LOC101469154 other downstream 1048178 12274760 ~ 12278624 (+)

Expression


Co-expression Network