LOC120557367 (LOC103359635,LOC102796318,LOC100691863,LOC101486295,LOC102211045)


Basic Information

Item Value
gene id LOC120557367
gene name LOC103359635,LOC102796318,LOC100691863,LOC101486295,LOC102211045
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 17861346 ~ 17870786 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797629.1
tgtgtctgtgtctgtgtacagtGTGTCCTTGTGCATCTATGTGTCCGCACGCCTGACAGGATAAATCCAGCTTCTcttccattttctctctctttctctctgactctcgttctctctctcacactctctctctctctctctctctcttacacacacacacacacacacacgcatacacacaggTGCTGTTCTTTGCCAAccctcactctcacacactcacattcagAACACACAAACTCAACAGAGGATTGTAGTTAGCCCACTTTTCTGGTGCTGAGGAACTCGACATTTTGCCTTCATGGAGGATTACCACAAACCTGACCAGCAGACAGTGCAGGCGCTGAGGAACATTGCCAATCGCCTCCGAATCAACTCCATCAAGGCAACAACTGCAGCGGGCAGCGGACATCCCACATCATGCTGCAGTGTGGCAGAAATCATGTCTGTGCTTTACTTCCACACCATGAAGTATCGCCCTGAAGACCCAAGGAACTTCAACAGTGACCGCTTCATCCTGTCCAAGGGTCACGCTGCTCCGGCCCTGTATTCCATGTGGGTTGAAACGGGCTTCCTAAAGGACAGTGAACTGCTCAGTTTGTGCCAGGTTGACGCTTCCCTAGAGGGCCACCCAACCCCTAAGCAGCAAATTGTGGATGTAGCCACTGGCTCCTTGGGGCAGGGTCTTGGTGTGGCCTGTGGAATGGCTTACACTGGGAAATACTTTGACAAGTCCAGTTATCGTGTGTTCTGCCTGATGGGGGATGGTGAGATGTCAGAAGGTGCTGTTTGGGAGGCCATGTCGTTCGCCTCCTACTACCAGCTTGACAACTTGGTGGCCATCATGGACATCAACCGTCTGGGCCAAAGTGATTCGGCACCCCTGCAGCATCACGTAGAGAAATATCAGAAACGATGTGAAGCTTTCGGCTGGCACGCCATCATTGTGGATGGACACAGTGTGGAGGAACTTTGCAAGGCTCTGAGCCAACCACGTCATCAGCCCACTGCCATCATTGCTAAAACCATTAAGGGCAAAGGCATTCCAGCTGCAGAGGATAAGCTGGGGTGGCATGCCAAACCTCTGCCCAAAGACATGGCCGAGATGGTTATGAAGGATCTGCAGAGTCGCATCATGAACAGCAGCAAACACCTGTACCCTCCTGCTCCTATCGAGGACTCCCCACCGGTCAGCCTGAGGAACATCAGGATGCCTAGCGCACCCAGCTACAAGACTGGTGAAAAGATTGCCACACGGAAGGCGTATGGGATGGCGTTGGCCAAGTTAGGCCGCTACAATGAACGTGTGGTGGCCCTTGATGGAGACACCAACAACCTCACCTACTCGGAGATCTTCAAGAACGAGCATCCCAACCGCTTTGTGGAGTGCTACATCGCTCAGCAGAACATGGTCAGTGTTGCCATGGGATGTGCTGCCCGTGAGAGGAACGTTGTGTTTGCTAGCACTCTGGCTTCCTTTTTCACCCGTGCCTACGACCAGCTCCGCATGGCAGCCATCTCAGAAAGCAACATCAACCTGTGTGGCTCCCACTGCGGCCTGTCCACCGGAGAGGAAGGACCCTCTGTGATGGGTCTAGAGGACGTGGCTATGTTCAGGGCCCTTCCCGCATCGACTATTTTCTATCCCTGTGACGGTGTGTCTACAGAGAAGGCTGTGGAACTGGCTGCAACCACAAAGGGTGTTTGCTACATCCGAACCAGCCGCCAAGACAGTTCCATTATCTATAACAGCAGCGAGGACTTCCATGTTGGACAGGCTAAGGTGGTGTACCAGGGCAAGGAGGACCAGGTGACTGTGGTGGCAGCTGGAGTGACTTTGCATGAGGCCCTGGCTGCAGCTGAACATTTAAAGAAAGAGAGGATCTCTGTCAGGGTTATTGACCCCTTCACAATCAAACCACTGGATGTCAAAACCATCATGGACCACACACGTGCCACCAGGGGACGACTCCTCACTGTGGAAGACCACTACTATGAAGGTGGTCTTGGGGAGGCAGTGTCCTCAGCAATGGTCAATGAGTCTGGCTTCAATCTGCATCGTCTGGCTGTGTCCCACATCCCCCGCAGTGGCAAACCACACGAGCTGCTCAAGATCTATGGCATCGACCGTGAAGCCATCACCCAGGCTGTCCGCAAGATGCTCAGCAGCTCTACCAACGCCAAGTAACTTTCTCTCTGCCCTACCCACCTATCTGTTCACACCCCTGCAGATGACGATAAACAGTCAAGTATGTTTTTGATTCACATGACACCCAACTTTTTAAATTCCTTCACTGTGAATGCCCCTAAGTGTGTACTGAAGTAATGTGATTTTGTGCTGTACACTTTGAAGTAGAGTTCCACATTTACCTTTCTTTCATGCATCCATCAcatcacagaaaagaacagAGATACACAAATTCAAACACACATATCCTCACTCCTAAACTTAGCATTGTCATAGATCTAGTTCAGTATTCAAAATGTGGCCATAACTGACTTTGTAGTTGATGGATGCTCACCATACAATTACAATTACCGTATTACATGTTCAACAGGAGTACTAAGTAATGCtctcatgtgtttttttaaatgctcttTGATGAACTTCAACtggaaatgtttttatattgttcTTATGTAGCTCTTGGGTGGGGCATAGCTTTAAAGTATGTTATCATGACAGTAGGGTCAGAAACATGGTAACTGAGTTGTTGTTTGTAGAAAgtagtggagaaaaaaaatcaaacaaatgtaGGTAGGTCATTAAGAGCAGTCACTCAGAACCACAAATCACATCTTCAGATGATTAAAACTCATGTGGTTTTAAAAGTTGTATAATTTCTCTTCAGCACTGTATATTGTTGTTATTGATTTTAAAGTTACCATCAACCTACGCACCTCAATGTTCATTTGCTACAATTGGACCATACCAGCAGTGTGGAGATAATCATTATTTGGTCAGTGTTATCTTTTTTACATAAGGTGGAGGGCTGAAGGCCCTTTAAGTGCTGATGGAGAATATGGCTAGCTGTGACTATGAAGGTAGAGTTACATCTGACTTGTAAACCCAAGAAACATCACTTTCTTTGTTACTTGAAATTTTGTATGTACCTGACTTTCATGTAATAAAGCCCACTGCATTTGA

Function

NR:

description
PREDICTED: transketolase-like

GO: NA

KEGG:

id description
K00615 E2.2.1.1, tktA, tktB; transketolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797629.1 True 3145 mRNA 0.48 14 17861346 17870786

Neighbor

gene id symbol gene type direction distance location
LOC120556840 LOC102792430,LOC100693756,LOC102298411,LOC101487248,LOC104946168,LOC102193684 coding upstream 80518 17769486 ~ 17780828 (+)
LOC120556837 NA coding upstream 142017 17706215 ~ 17719329 (+)
LOC120556839 NA coding upstream 163118 17690623 ~ 17698228 (+)
LOC120557621 NA coding upstream 177125 17681239 ~ 17684221 (+)
tmcc1b LOC103357903,LOC102207997,LOC101484470,LOC100708690,LOC102775589 coding upstream 180913 17663261 ~ 17680433 (+)
LOC120557366 LOC103359651,LOC102211705,LOC101487058,LOC102294841,LOC102795823 coding downstream 3318 17874104 ~ 17888579 (+)
card19 card19 coding downstream 18443 17889229 ~ 17894265 (+)
LOC120558252 NA coding downstream 22507 17893293 ~ 17893420 (+)
LOC120557498 NA coding downstream 59696 17930482 ~ 17947838 (+)
LOC120557497 LOC102289810,LOC102203785,LOC102791845 coding downstream 80303 17951089 ~ 17961726 (+)
G39665 NA non-coding upstream 7980 17852516 ~ 17853366 (+)
G39654 NA non-coding upstream 75536 17785259 ~ 17785810 (+)
G39638 NA non-coding upstream 125440 17735486 ~ 17735906 (+)
G39633 NA non-coding upstream 138998 17715412 ~ 17722348 (+)
G39630 NA non-coding upstream 170770 17689804 ~ 17690576 (+)
G39861 NA non-coding downstream 578061 18448847 ~ 18452500 (+)
LOC120557393 NA non-coding downstream 673369 18544155 ~ 18547192 (+)
G39925 NA non-coding downstream 699805 18570591 ~ 18570983 (+)
G39926 NA non-coding downstream 702896 18573682 ~ 18573909 (+)
G39927 NA non-coding downstream 703196 18573982 ~ 18574211 (+)
LOC120556838 NA other upstream 127335 17720441 ~ 17734011 (+)
G39581 LOC104949003,LOC103357913 other upstream 252130 17607930 ~ 17609216 (+)
LOC120557637 minos1,LOC103357934 other upstream 483786 17371483 ~ 17377560 (+)
srsf3b srsf3,LOC104948713,LOC103465186,LOC102226051,LOC103150674 other upstream 663129 17193151 ~ 17198217 (+)
G39351 NA other upstream 741456 17112113 ~ 17119890 (+)
wnk2 wnk2,LOC104946158 other downstream 33912 17904698 ~ 17930118 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other downstream 318796 18189582 ~ 18194911 (+)
LOC120557740 acy1 other downstream 344920 18215706 ~ 18226578 (+)
oxtrl LOC104920519,LOC103360274,LOC100702815,LOC102207462,LOC102295060 other downstream 1425473 19296259 ~ 19314826 (+)
G40164 LOC103360294,LOC104965627,LOC100702547 other downstream 1454043 19324829 ~ 19326625 (+)

Expression


Co-expression Network