tespa1


Basic Information

Item Value
gene id tespa1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 22298776 ~ 22309762 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797642.1
caaaacaataaacgtatttgtgtcatgttggaGTTGCTATATAGCCTATTGGTCATATTCGCCTATCTTGGCAATTATCCCTTCTCTATAGTCAACCGTTACCTCTGACATTTCCAAAAACCTGTTCCGAGTCAGTCTGCTCTTGTTTCTGCAGGATGTGTCACAGCTGCGTCCCACGCTGATGAAACTGTTGTATTTCAGATGAGATGCAAAGTCACTTCCTACAGTCTGCTCAAACTCCATCCCCTGTAGCCTAATAAACCGCGCAAATTCAACCACACATGCAGGCAAGCTGACACGAATCAGAAGAAAACACACCAGAAACTCATCATTGTGAAGTAACCATTGGACGCAGGCTGCGTGCAGTTTGAGAGTCTGCAAAAGATTACAGATCAGTTAGATATCTCAGCACTCCGACAACAGGAAACGAGAGAAAGAGCGCCACTGACACAATCGAAACCTGCATCCATGAAGCTTCGACCCCACCATGTTCCCCGGGCTGCACGTAAACCTTCATTCATACAGTCGTTGATGTGAACTGAGGCGATGGAGAGCCCGTCGTCCACAGTGAGGCGGCGAGCCTGGATCAACAGCAGCCGACAGTGGCCCACTCTGGGGGAGCTGGACCCTGAGGGACAACCGTGCAACCTCCCCTCTGCCTCTGCCTCTATAGCCGATGATGATGTCTTTTCTGACGGATGCTTCACAGGAAAGATTGAGAACTGGCTCCTGGGATGTGGGTCGGAGGCGTGCTCAGAGAAGACTGGCCAGCTGAGTTTTGAGTCTGTGCTGAAAGCCAGCAACTTTGACGATGAGCTAAGTCTTGGTGCTGATgctttttgtttaaatgGTGGAGAGATTACATCTGAAGCTGGCCTCGCACACCATCCCATATCCAAACAAGGTCCCAGCAGACTCACCAGTACCCCTCGTCAGAAACTATGTCTGCCGTCACTGAACTTGGGCCAGAGCATGGCGTCCAgctgcctctcctcctccacctgtaaGACTACATCAAGTATATCGGAGGTCCTGCAGTTGTGTTCGGAGGATGCGGAGGAGACGCTGTACGAGTTGGGTTTCGGTTGCGATGAGCCGCAGGTCACTGTCCGCATCCCTTCTCGCTTCTTCACCTTCCCCTCCATGTCTCAGGGCATCAACTTCCGCCTCTTCCTGGACTCACAGCTGCGGCGGATACGAGAGGAAGACCCCAGCCTCTCTCTTGCTAGTCGTTTCAGACAAGTGCAAGTGCTCACAGCAATGGCCAACGCTTTCtactccctctactctcacgtGTCCCGCACTCCTGTACAGAAACTGGCCACACCAGAGTTTACCTTCTCCTCGTCTCCCGTGGAGAGGATCGAACGCTTCAGGAGCCCTGTCCGCAGCGAGCCACGCTCTCCGGTGGAGAGGCTGAAGGACACCGTCTCCAAGATGTGTCTCTACACAGGCTCTCCTCGCGGGTCAGACTCCACCTCTCCACAGCCCTCACCCATGAAAAGTTCCAGCCTCCCTGATGTTGTGGATATAGTCCTGGATAAAGTCAAGACTGGGGCGACCAAGAAACTGGATTTGGGGGAATATTATAACAGGAATCCAGCTGTGGATGTTAGGCTGGTCACGGATGGTGATAAATCCTGTGACAATGGGAAAGAGGAGCAAACACAGGAGACTGTGGTGGACACAGACATTCTTCAAAATGGAAATAAGATCTGTAATAGGGAGATGCAGGGCAGCAAACAAACCGATAATGTTGATGCCGATGAAAACTGTGCCAAACCAGACCACCTCGACAGCAGGACTCACAGTGTAAGAACTACTCTAGCGTCATCGTTATCAGGAGAAACTGTGCTAGAAACACGTCAGCTGGACTCACGTTCAACTCAAAGTGAGACAAGGACTGCTCATCTTAAACCATTTCCCAAGGTTACATACGATCTAATCTGCCCGCAGATAGTCGAAAGTGTACACCAGGCACCTTTCTGTTGTCAACACACACATTGTCCAATAACAAACACTTTACCTCCTGTCTCCTCTGAGACAGAACGCATAGATAAATCATGTCCTGGatcacatacacaaacagctTTCCCTGAGCCAGATGCCAGACAGCTGGATGCAGCCAGATCACTTCCTGTCCCAGCCCCCAATTACTGCATCACTGTGACTGGCTGGGAGGGGGACGACGTCTCTTCCTGTTCCTCAAACATACCAGATTCTGGTCATACTTCTACTGCCACACCTGTCCAGACATGTGAGGAGTCATTTAACAAGGGGGAAAGCCGGTACCTGAAACCACAGACACATCAGGGCCTGGGCCACGACTCCAATAACCTGCAACAGGTTAACTCCTTTGAGCTGGAGGAGGTGCATAGTGCAGGAGAGGAAGATTTTGGAGCATTTTCGGATTCTTCAGAAActacaagaaaaacaacaacaacaacaacaacaacctctcTGTTGTCCAACAAACATCAATGCAAAGGTGAGGTGGTCCGGGGCGACAGCATGCAGTCAGACAGCAGCGGCTACGTGGACGAAGAAGTCAGCCCCTCATCAAACACACATAGCAGATGACAGAGAAATCAGAACTCCATGTAAAAAGTGTTAATAACGTAGTGTTTTTTTCACCTGTGGACTTTTTCCTGCACTGACGATTTGAGTTTCCAAGAAAGGGGCCTGCAGTCAAACCGGCCCAAAATATTTAAACGTAAACAATAGACCTCGCTGAACAGGCCAGAGTACTGTTGTTACTGTGTGCTGTTTTCTGATGGGTACAGTGCCGTGGAAAGGAATTTACagacaaaaaaagtctaaatctTAAACAGACTTGGTCTCACGTGAAACTTTCAGAGACTGGAGAAGCTTTTTGTTCTCAGTAAGAGTTGCACTTGCAGACATGCAAAGAATTACATTTCTCCCCAGTGTTCATACTGAATACAGAATTTTGAGAAGAAGTAATCAAAAAACTGCTCCCGTACAAAAGGTCTTGATGAAATACTGTGTGGACCatgtttaaattattaaaatagttattGGAGAATATTCAAGTTATTACAACAGTTGGcagtaaaatgtacaaaaatgttttattggaAACAAAGTCAATTTCACATGGAGCTCACATTGTAGTTCATTGTTTCTCTAAAACTGGGCAACCTTTTCCACTACCACAACAAAGAAGTCTATCTCAAATGTCAGCATAGTTGTCAAGGGTTTCAGCAACTAAAACTCACTTAAAAAAACAGCCTAAGTTCCTTATTCGAATTATCAGAAAAACAAGATGCAGATCTGCCTTTTCAGAGAATGAGGTTAACATCAAACGCACCAGTGGGAGGAGATGTACAGAAACATGGTCAGCCTGCATTGTGCAAAAGACATTATCTAGTCCAAACTGTTCACTCTTTTCAATACTTGTTCCAGCTGAGTGCAAGGCAGAATATCAAGGTGGGTGGTAATGAATCCTTACACCAAGACACAGCAAGTGCTTGGAGAAAATAATCTGGAAAATCACCGTCATCAATTTTCAAATATCATGACAGGAATCAAAGTCACAttgagagacaaaaaaaaaaaaaatcataggggtttaaattataaa

Function

NR:

description
sperm-specific antigen 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797642.1 True 3604 mRNA 0.47 12 22298776 22309762

Neighbor

gene id symbol gene type direction distance location
LOC120557376 LOC104966918 coding upstream 15793 22278582 ~ 22282983 (+)
LOC120557368 LOC103356557,LOC104967292 coding upstream 46095 22221298 ~ 22252681 (+)
col2a1b col2a1,LOC103356561,LOC107668081,LOC107585898 coding upstream 106390 22144371 ~ 22192386 (+)
LOC120558047 ppp1r1a,LOC102206106,LOC102311133,LOC101483072 coding upstream 254883 22006540 ~ 22043893 (+)
npffl npff coding upstream 298305 21997351 ~ 22000471 (+)
igsf8 LOC103356551 coding downstream 45349 22355111 ~ 22370933 (+)
dctn2 dctn2 coding downstream 151729 22461491 ~ 22477265 (+)
ddit3 ddit3 coding downstream 173434 22483196 ~ 22487568 (+)
arhgap9 arhgap9 coding downstream 197565 22507327 ~ 22554602 (+)
LOC120557262 r3hdm2 coding downstream 366760 22676522 ~ 22753513 (+)
LOC120557379 NA non-coding upstream 964 22294954 ~ 22297812 (+)
G40923 NA non-coding upstream 24475 22274074 ~ 22274301 (+)
G40904 NA non-coding upstream 96040 22202126 ~ 22202736 (+)
G40840 NA non-coding upstream 365544 21911874 ~ 21933232 (+)
G40842 alas1 non-coding upstream 380965 21917243 ~ 21917811 (+)
G40948 NA non-coding downstream 79416 22389178 ~ 22425121 (+)
G41021 NA non-coding downstream 244855 22554617 ~ 22554845 (+)
G41040 NA non-coding downstream 281910 22591672 ~ 22593083 (+)
G41041 gli1 non-coding downstream 285665 22595427 ~ 22596515 (+)
LOC120556826 NA non-coding downstream 466479 22776241 ~ 22824156 (+)
itga7 itga7 other upstream 306165 21950376 ~ 21992611 (+)
vgll4b vgll4 other upstream 955065 21295102 ~ 21343711 (+)
G40353 rassf1,LOC102778369 other upstream 2150086 20148104 ~ 20148690 (+)
abhd14b abhd14b other upstream 2375227 19917889 ~ 19923549 (+)
cenps LOC103362653,LOC103137101,LOC103464519 other upstream 2439435 19851548 ~ 19859341 (+)
cbfa2t2 cbfa2t2 other downstream 1425186 23734948 ~ 23771932 (+)
znfx1 NA other downstream 1538285 23848047 ~ 23867512 (+)
bloc1s1 bloc1s1,LOC102796612 other downstream 2245763 24555525 ~ 24560318 (+)
slc12a5a LOC103355988 other downstream 2898394 25208156 ~ 25310553 (+)
slc16a1a slc16a1,LOC102208676,LOC102781600 other downstream 3372645 25682407 ~ 25690935 (+)

Expression


Co-expression Network