LOC120557376 (LOC104966918)


Basic Information

Item Value
gene id LOC120557376
gene name LOC104966918
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 22278582 ~ 22282983 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797647.1
GCATTCGTGCAGCCCGGAGGTACAAAACAGGCACATCTAATTTTCAATCACATTAATTGGACAGTTACCTGCGCGCGGGCGAGCCTAGCTAAACTTCAGAAGCTAGCTACTAGTGGGCCCCCAGGTCATCAAGAATATAATGGCAGTGGTTTTAGGAATGAAGGCCATCACAAAAAAGCTTATGTTGGCCGATGTTTTTGCGGAAGACTCTGGAAATGAGCGAACATTTTACGGCTTTTCTGACAGTGAAATCGGCGACCCCTGCGAAAAGAATTCAAATTTTCAAGATGAAGATGAAGCCCAGCCTGACCTTTCCCCCAAAAAGCAGAAAGCCACATCTAAACCATCTTTTGGTGCCCAAAACTTCAGGCTGAGGGTGGCACTCCGCTCCGCTTCCTCTACTCAGCAGTCCACTGATGATGAGGAagaggcagaggaggaagaaaagatgacaaaaaAGAGAGGGGTGAAGTGGGCAGGAAAGACCAGTCAGGCTAAGAAGAAGAAACGTGTTAAATTTGAAGATGAAGAGATAGCAGTGGCTCGGCCGTCTCCTTCTAAAGAGCGTGGATCCGATTCAGCAGAAGATGTATCCAAGTCTTTCCTGGCCAAGAGAGAACAGAACATCAAGGCCAACAAAGCAATGTTGGCTCAGCTGATGGCAGACCTGCAGAAGATTCCAGGAGGTGCTGGGATTCTGAAAAAACAAGCAGACAAACAGAagacaaaagagagaagttcTCGCCCACCACGCTCTGGTGCAGCTGGAGGACAGTCCAGGAAGAACCCAGAGCGGGCGTCCCGCAGACGGACCCGCTCTATGGGTGGGGGAGGTGAGGATCCTTCAGCCCCTAAGGAGGAAGAACTGGAGCTCAGCTTGGAGGATGAGCTGCTGGAGGTACGTCGTAGCCGAGCCCCACAGCGCCGTGGAGCTCCACGGCCTAATCAGTGTAAACCTCATTGTGTCCGTCCTGTGGAGGACATCACAGAGGACGAGATTCAGCTGGTTGCAGAGAACATGACTGAAAAGGTCTACAACAGCGTCACAGGCTCCACATGTCATCAGTGCCGTCAGAAAACGATTGACACTAAGACGTGCTGCCGCAGTGAGGACTGTCGTGGGATTCAGGGTCAGTTCTGTGGGCCGTGTCTGAGGAACAGATATGGAGAGGATGTCAAGAAGGCGCTGCTTGATCCGGAGTGGAAGTGCCCTCCCTGTCGTGGCATTTGCAACTGCAGCTTCTGCCGCCAGCGTGAGGGACGCTGCCCGACTGGCATCCTGTTCCCCCTGGCTCAGTACCACGGCTTCTCTGACGTCCACTCCTACCTCAGCAGCCTCCGTAACAAACTGAAGAGTGAAGACAACGATGTAGAGACGTGATATCAACACTTGGTGGAGCAATTGTTCATACTGTTAACTGTATCCCTATTCTAGTTTTGAGTCAGTTTTTAATCCTAGTAAAACGTACACGTGACTtgattttaaatgaataaagaTATGTTTTGATCA

Function

NR:

description
PREDICTED: cell division cycle-associated protein 7-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797647.1 True 1510 mRNA 0.50 9 22278582 22282983

Neighbor

gene id symbol gene type direction distance location
LOC120557368 LOC103356557,LOC104967292 coding upstream 25901 22221298 ~ 22252681 (+)
col2a1b col2a1,LOC103356561,LOC107668081,LOC107585898 coding upstream 86196 22144371 ~ 22192386 (+)
LOC120558047 ppp1r1a,LOC102206106,LOC102311133,LOC101483072 coding upstream 234689 22006540 ~ 22043893 (+)
npffl npff coding upstream 278111 21997351 ~ 22000471 (+)
LOC120557365 NA coding upstream 338808 21926042 ~ 21939774 (+)
tespa1 NA coding downstream 15793 22298776 ~ 22309762 (+)
igsf8 LOC103356551 coding downstream 72128 22355111 ~ 22370933 (+)
dctn2 dctn2 coding downstream 178508 22461491 ~ 22477265 (+)
ddit3 ddit3 coding downstream 200213 22483196 ~ 22487568 (+)
arhgap9 arhgap9 coding downstream 224344 22507327 ~ 22554602 (+)
G40923 NA non-coding upstream 4281 22274074 ~ 22274301 (+)
G40904 NA non-coding upstream 75846 22202126 ~ 22202736 (+)
G40840 NA non-coding upstream 345350 21911874 ~ 21933232 (+)
G40842 alas1 non-coding upstream 360771 21917243 ~ 21917811 (+)
G40804 NA non-coding upstream 500986 21713797 ~ 21777596 (+)
LOC120557379 NA non-coding downstream 11971 22294954 ~ 22297812 (+)
G40948 NA non-coding downstream 106195 22389178 ~ 22425121 (+)
G41021 NA non-coding downstream 271634 22554617 ~ 22554845 (+)
G41040 NA non-coding downstream 308689 22591672 ~ 22593083 (+)
G41041 gli1 non-coding downstream 312444 22595427 ~ 22596515 (+)
itga7 itga7 other upstream 285971 21950376 ~ 21992611 (+)
vgll4b vgll4 other upstream 934871 21295102 ~ 21343711 (+)
G40353 rassf1,LOC102778369 other upstream 2129892 20148104 ~ 20148690 (+)
abhd14b abhd14b other upstream 2355033 19917889 ~ 19923549 (+)
cenps LOC103362653,LOC103137101,LOC103464519 other upstream 2419241 19851548 ~ 19859341 (+)
cbfa2t2 cbfa2t2 other downstream 1451965 23734948 ~ 23771932 (+)
znfx1 NA other downstream 1565064 23848047 ~ 23867512 (+)
bloc1s1 bloc1s1,LOC102796612 other downstream 2272542 24555525 ~ 24560318 (+)
slc12a5a LOC103355988 other downstream 2925173 25208156 ~ 25310553 (+)
slc16a1a slc16a1,LOC102208676,LOC102781600 other downstream 3399424 25682407 ~ 25690935 (+)

Expression


Co-expression Network