c4h1orf74 (LOC104948860)


Basic Information

Item Value
gene id c4h1orf74
gene name LOC104948860
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 18523155 ~ 18524040 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797678.1
GCTTTCATTTAATGTTACAAATTTGAACCATGTGTGATGTGATTTCTGCAGCTATGTCCGCTCAGGAGCTCTTTGTTGCTGCAGCTCGTAAAtgtctatctgctggtagaaaatCTCTTTCCGTCCCTCAGAGTCTGGATCTGGCTGTTCAGGTCTTAGCTCTTGATTTGGGATTGAAACCGGCTTTATTGTACGATAGCAACGGTGCCGGTGCAGATCAGGTGCAACAGTATTTGAGCTCTTTGCAGTCTTCCCAGCTTGTGTCTAAGTCACTTCTCACACTGGATTTAAATGGAAACACTCTTATTATTAATCCACTTACAGTCAGATCAAATGTAGAACAGCTGGTTCATGATAACAACGTGGCTTTTATTGATGTCTGCCACTCACTGGAGAAGCCAACCATCGCTGGCCTGCTCAGAGGAGAGCTGAAGAGCATGACACACGATTTACAGCTTCTCCTGAGAGGGGTTGAACAACTGAAGGAGGCTGAGAAACCTCATTATGTTGGAGAGAAGTCAGAGGAGTGGAACCTGTGCACAGCGTTTGGTATTTTATTGGGTTTCCCCGTCACTTACTGGTTCGATCAGAccaagagttttgaaaactgtctGTCTATGACTCCCCTGATGGTGACTACAGCTTCAGCAACATGGCAGGCAGACACCGCAGGTCACAGATGTTGTTTGTACTCCTTCAGCGTCCCGGCTGTTCTGCTTAAAGCGGTGCAGTCCAACCTGGAAAACTGGAAGCTTTGTTTACAAGAAAGATTTCAGCAGCAAAATGTCCTAAAGGATCTTACAGTTTGTCAATCCACAGTCACTCTGCCCTCAGTCTGTTTGTAATGCGAGCATGAAGTTGtctttaaataaactgttaaagACGA

Function

NR:

description
PREDICTED: UPF0739 protein C1orf74 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797678.1 True 886 mRNA 0.45 1 18523155 18524040

Neighbor

gene id symbol gene type direction distance location
tomm6 NA coding upstream 69 18521759 ~ 18523086 (+)
tspo tspo coding upstream 5444 18515298 ~ 18517711 (+)
ppil1 ppil1,LOC102783931 coding upstream 94557 18424507 ~ 18428598 (+)
si:ch211-157b11.14 NA coding upstream 131499 18384593 ~ 18391656 (+)
c4h1orf159 LOC104931340,LOC103359840,LOC101474389,LOC108231181,LOC102786121,LOC107100091,LOC102306124 coding upstream 140060 18376550 ~ 18383095 (+)
eif4enif1 eif4enif1 coding downstream 25936 18549976 ~ 18564635 (+)
patz1 patz1 coding downstream 41861 18565901 ~ 18579863 (+)
tgfa tgfa,LOC102305789,LOC107385163 coding downstream 69124 18593164 ~ 18598375 (+)
trub2 trub2,LOC102777509 coding downstream 87583 18611623 ~ 18615957 (+)
LOC120556859 NA coding downstream 115819 18639859 ~ 18645117 (+)
G39861 NA non-coding upstream 70655 18448847 ~ 18452500 (+)
G39665 NA non-coding upstream 669789 17852516 ~ 17853366 (+)
G39654 NA non-coding upstream 737345 17785259 ~ 17785810 (+)
G39638 NA non-coding upstream 787249 17735486 ~ 17735906 (+)
G39633 NA non-coding upstream 800807 17715412 ~ 17722348 (+)
LOC120557393 NA non-coding downstream 20115 18544155 ~ 18547192 (+)
G39925 NA non-coding downstream 46551 18570591 ~ 18570983 (+)
G39926 NA non-coding downstream 49642 18573682 ~ 18573909 (+)
G39927 NA non-coding downstream 49942 18573982 ~ 18574211 (+)
G39934 NA non-coding downstream 74984 18599024 ~ 18599229 (+)
LOC120557740 acy1 other upstream 296577 18215706 ~ 18226578 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other upstream 328244 18189582 ~ 18194911 (+)
wnk2 wnk2,LOC104946158 other upstream 593037 17904698 ~ 17930118 (+)
LOC120556838 NA other upstream 789144 17720441 ~ 17734011 (+)
G39581 LOC104949003,LOC103357913 other upstream 913939 17607930 ~ 17609216 (+)
oxtrl LOC104920519,LOC103360274,LOC100702815,LOC102207462,LOC102295060 other downstream 772219 19296259 ~ 19314826 (+)
G40164 LOC103360294,LOC104965627,LOC100702547 other downstream 800789 19324829 ~ 19326625 (+)
brk1 brk1,BRK1,LOC106565571 other downstream 900826 19424866 ~ 19426456 (+)
slc38a3b LOC103360384 other downstream 917968 19442008 ~ 19470998 (+)
LOC120557344 LOC104966310 other downstream 1093141 19617181 ~ 19632519 (+)

Expression


Co-expression Network