LOC120557395


Basic Information

Item Value
gene id LOC120557395
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 2826889 ~ 2836128 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797681.1
TGTGTGTCAGTACCTACTGTCATACTTACGTCCATATATTTGTTTCATATGACTGCTGCGATAACTCTTACAGTATTTTGAAATTTTCAGGGTTGCGACTAATCGAGGAGCATGGACCGTGGAACAGTAGATACAAAGGAATCAGTCATGCATGTTTCGTCCCCTGAGAATTGTGACATTGACATTTTAGAGAATGGAAGGACCGTCAAAGATGTCAtagacaataaaataaaagagcTTGGTTCTATGgacaatgaAGAGCCATTCTACGTGGCAAATCTAGATAGCGTGTATAAGAGGCACCTCAGATGGCTTACTAACTTGCCTCGAGTCAAGCCTTTCTATGCAGTGAAGTGCaacaacacagcagcagttttgaGGCTGATGAGTGCTCTGGACACAGGTTTCGACTGTGCCAGCAAGGCTGAGATCCAGATGGCCTTGTCCCTCGGAGCGACACCTGATAAAATAATTTACGCACATACAACCAAACCACTGTCGCACATCAAATATGCCTGTGCTCATGGAGTAGATATGATGACTTTTGATAGTGAGGATGAACTCCTTAAAATGTCTCGTTGTCACGCCAAAGCCAAACTGGTACTCCGCATCGCAGTGGATGACTCCAAGTCGCTGCTAAAACTCAGTTCAAAGTTCGGAGCCAGACTGGTGTCAGTCGGGAAGCTGCTGGAACGTGCTGGAGAGCTGGGCTTAGACGTCATAGGGGTCAGCTTTCATGTAGGCTGCGGTTGCACTGAAGGTTCGACGTTCAAACAGGCCATTGGAGATGCCAGACATGTCTTTGACATAGCGGATTTGCTGGGAGTCCAGATGAGAGTCTTGGATATTGGTGGAGGATTTTCTGCGATTGGGGAGTTTCAAGAGAAATTTGAAGAgTTTTCAGAAGTGATTAATGGAGCACTGGATGAATTCTTCCCGCCTGACAGTGGGGTGCAGATTATTGCAGAGCCGGGCCGGTACTACGTGGAATcagccttcacactggcagcgAACGTCATTGCCAGAAGAATAGTCAGTGATGATATGGATGAACATAGCGACGGTGAGGAAAACAGCCCTGGCAGAATTATGTACTACCTTAACGATGGAGTGTTTGGCTCCCTGAGTTGCATTGTCCATGACCCTGCTCACCCCAACTATGAGCCATATCTTCACAGGGTTGTTGAGAGCAGCGAGCGGAGATACCGGTCTGTTATCTGGGGTCCAACCTGCGACAGCTTTGACAAAGTAATTGACAACTACTGGATTCCTGAGTTGCGTGTGGGGGACTGGCTTCTCCTCGACAACATGGGCGCTTACTCTGTCAGTGCAACGTCTGACTTCAATGGCTTTGAAAGAGCGCACATTTACCCTGTTGTGACCGCTGAGACCTGGCACGCCTTAAACCTTTCTCACACCTTCAACAACCCTTAattcacacccccaaccggctcgtcagacaccgcctaccaagagcctgggtctgtccgaggtttctt
>XM_039797682.1
GTGTGTCAGTACCTACTGTCATACTTACGTCCATATATTTGTTTCATATGACTGCTGCGATAACTCTTACAGTATTTTGAAATTTTCAGGGTTGCGACTAATCGAGGAGCATGGACCGTGTAGATACAAAGGAATCAGTCATGCATGTTTCGTCCCCTGAGAATTGTGACATTGACATTTTAGAGAATGGAAGGACCGTCAAAGATGTCAtagacaataaaataaaagagcTTGGTTCTATGgacaatgaAGAGCCATTCTACGTGGCAAATCTAGATAGCGTGTATAAGAGGCACCTCAGATGGCTTACTAACTTGCCTCGAGTCAAGCCTTTCTATGCAGTGAAGTGCaacaacacagcagcagttttgaGGCTGATGAGTGCTCTGGACACAGGTTTCGACTGTGCCAGCAAGGCTGAGATCCAGATGGCCTTGTCCCTCGGAGCGACACCTGATAAAATAATTTACGCACATACAACCAAACCACTGTCGCACATCAAATATGCCTGTGCTCATGGAGTAGATATGATGACTTTTGATAGTGAGGATGAACTCCTTAAAATGTCTCGTTGTCACGCCAAAGCCAAACTGGTACTCCGCATCGCAGTGGATGACTCCAAGTCGCTGCTAAAACTCAGTTCAAAGTTCGGAGCCAGACTGGTGTCAGTCGGGAAGCTGCTGGAACGTGCTGGAGAGCTGGGCTTAGACGTCATAGGGGTCAGCTTTCATGTAGGCTGCGGTTGCACTGAAGGTTCGACGTTCAAACAGGCCATTGGAGATGCCAGACATGTCTTTGACATAGCGGATTTGCTGGGAGTCCAGATGAGAGTCTTGGATATTGGTGGAGGATTTTCTGCGATTGGGGAGTTTCAAGAGAAATTTGAAGAgTTTTCAGAAGTGATTAATGGAGCACTGGATGAATTCTTCCCGCCTGACAGTGGGGTGCAGATTATTGCAGAGCCGGGCCGGTACTACGTGGAATcagccttcacactggcagcgAACGTCATTGCCAGAAGAATAGTCAGTGATGATATGGATGAACATAGCGACGGTGAGGAAAACAGCCCTGGCAGAATTATGTACTACCTTAACGATGGAGTGTTTGGCTCCCTGAGTTGCATTGTCCATGACCCTGCTCACCCCAACTATGAGCCATATCTTCACAGGGTTGTTGAGAGCAGCGAGCGGAGATACCGGTCTGTTATCTGGGGTCCAACCTGCGACAGCTTTGACAAAGTAATTGACAACTACTGGATTCCTGAGTTGCGTGTGGGGGACTGGCTTCTCCTCGACAACATGGGCGCTTACTCTGTCAGTGCAACGTCTGACTTCAATGGCTTTGAAAGAGCGCACATTTACCCTGTTGTGACCGCTGAGACCTGGCACGCCTTAAACCTTTCTCACACCTTCAACAACCCTTAattcacacccccaaccggctcgtcagacaccgcctaccaagagcctgggtctgtccgaggtttctt

Function

GO:

id name namespace
GO:0042462 eye photoreceptor cell development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797681.1 True 1499 mRNA 0.48 9 2826889 2836128
XM_039797682.1 False 1492 mRNA 0.48 9 2826890 2836128

Neighbor

gene id symbol gene type direction distance location
LOC120557397 NA coding upstream 8099 2810258 ~ 2818790 (+)
LOC120558018 NA coding upstream 81609 2735859 ~ 2745280 (+)
LOC120558182 flnb coding upstream 92355 2640388 ~ 2734534 (+)
LOC120558247 NA coding upstream 870439 1956316 ~ 1956450 (+)
LOC120558248 NA coding upstream 874405 1952350 ~ 1952484 (+)
ccdc51 NA coding downstream 27408 2863536 ~ 2882763 (+)
osgn1 LOC102208111,LOC100711663,LOC103370650,LOC101475239 coding downstream 80668 2916796 ~ 2949567 (+)
mtss1 LOC102789651,LOC101478388 coding downstream 127999 2964127 ~ 3073270 (+)
trnae-cuc_2 NA coding downstream 446803 3282931 ~ 3283002 (+)
trnae-cuc_3 NA coding downstream 449702 3285830 ~ 3285901 (+)
G35548 NA non-coding upstream 40550 2783952 ~ 2786339 (+)
G35544 NA non-coding upstream 52299 2766807 ~ 2774590 (+)
G35541 NA non-coding upstream 67393 2759204 ~ 2759496 (+)
G35380 NA non-coding upstream 106188 2720074 ~ 2720701 (+)
G35379 NA non-coding upstream 120434 2705600 ~ 2706455 (+)
G35572 NA non-coding downstream 31799 2867927 ~ 2884120 (+)
G35576 NA non-coding downstream 73069 2909197 ~ 2983784 (+)
G35584 NA non-coding downstream 164875 3001003 ~ 3067663 (+)
G35587 NA non-coding downstream 177903 3014031 ~ 3053586 (+)
G35589 NA non-coding downstream 184348 3020476 ~ 3078404 (+)
G35534 NA other upstream 79117 2747220 ~ 2747772 (+)
G35364 NA other upstream 238727 2583514 ~ 2588162 (+)
G35359 NA other upstream 332298 2487994 ~ 2494591 (+)
LOC120556786 NA other upstream 438915 2385615 ~ 2387974 (+)
asip1 NA other upstream 774746 2024224 ~ 2052143 (+)
G35578 NA other downstream 94796 2930924 ~ 3017125 (+)
G35618 NA other downstream 408103 3244231 ~ 3358820 (+)
epha8 epha8,LOC102791453 other downstream 617472 3453600 ~ 3589612 (+)
G35791 LOC101072424,LOC104921976 other downstream 1112706 3948834 ~ 3950128 (+)
G35921 NA other downstream 1651407 4487535 ~ 4585475 (+)

Expression


Co-expression Network