rem1 (rem1)


Basic Information

Item Value
gene id rem1
gene name rem1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 28904998 ~ 28915648 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797753.1
GCTGTcgctgtgacacacacacacacacagacacacacatacacacagagggagggagggaggtagatAACTCTGTGATTCCACTGCTGAATTTTTAACGCTGTTgtggaactttttttttccaggcgGGTTACTGTGGCACCAGGGTACTGTTACactgaaagagacagagagacaggtttcaGTTCAGTTCTGTTGTTTACTGAGGCTGCACAGACACTGGACTGTTCATGGGGTGTACGGTCTGTCCTGTCTTGATGCCGTTACCATAGCAAAATGACCCTGAACACCCAAAGAGAGAAGCAGCCCCTgcggcggcgaggcagcacgcCGATTCCTCCCACCTACTTCTACCAGCACCCGTCCTGGACTCAGGACCTTCAGGACCCTCGGCTCCCCGGCAGCACCCAGTCGGACCCCGAGCAGCCGCGCCCCCAGCGAAGCCACCCTCCTCTGGGACAATCGGCGTCCTACCACCCTGGAGACAAGTCACTCCACTACCGCGCCCAGTGGAGCTCAGACTCGGACGACGACTCTCAAAGCGACTCAGATTGTGTTTACAGAGTGGTGTTGCTCGGTGACCATGGCGTTGGAAAGACCAGCCTCGCAGGAATCTTTGCCGGGatcacagagaaagaggaacaaCCTGGAGAGGACACATACGAGCGGACACTGTCAGTAGATGGAGAGGAAACCACACTCATCGTCATGGATACCTGGGAGAACGACAAActggaggaagaggacgacTGCTCTCGGGACGACTGTCTGAAGGTTGGTAGTGCCTACGTCATTGTCTACTCCGTCACTGACCGCTCTAGCTTCGACGCCGCTGCTGAGCTTCGTATCACACTGCGACGCACCCGCCAGGCCGAAAACCTTCCCATCATTCTCGTGGGCAACAAGAGTGACCTGGTCCGGTCCAGAGAAGTCGCAGTGGAAGAGGGCCGAGCATGTGCTGTGGTATTTGACTGCAAGTTCATCGAGACGTCGGCGTCTCTGCAGCACAATGTGACCGAGCTGTTCGAGGGCGTGATCCGACAGATCCGCCTCCGCCGGGACGGCGGCGAGGCCGTCCAGCGCCGATGCTCCATCTACAAGCGCAAAGAGAGTCTCACTCAGAAGGCTCGGCGCTTCCTGGACCGACTGGTGGCACGCAACAACCAGCGCATGGCGGTCAAAGTGCGCTCCAAGAGCTGCCACGACCTGGCCGTCCTCTAAGGACGTGTCCACCAGAAATGTCCGGTCGGAGCTTTTTTGGCTTATTGAAGTTCTTTCTGTTTGTTGTATCGAGGACGATGGCATCTGTGGTGATTCTCACGTTCAGCAATTCAACAACAAAGATGATCAGCAGCAAACAGAGTCAGCGGACAGTTAGCCTACGTACATCGATGTGATCACTGTGAACAATTCATTTTCCTGTTTGAGCATTTGGTCTCACAATGTTTGTGACTTTTCCTCAAGATGATCTGAAAAAATTGACTGTGAAGgatcatcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaacatcaGGATTGTAGTTTCCACTGTGTGTTCTGTTTCTTGAGGTTTCAACAGCTTTCAGTTCAACACTGTGCAGAATAAAGTCTTAAAGGAACAGTCCTCTCAGTCGTTTCAAATCATGTTTTACAGACTCTACATCTAATACAGATGACCACCGCTATGATATGAATATGGTTTTAATTTCAGTtcaatgtattaaaaaaaagatactaTGTACAAATA
>XM_039797754.1
CTGTcgctgtgacacacacacacacacagacacacacatacacacagagggagggagggaggtagatAACTCTGTGATTCCACTGCTGAATTTTTAACGCTGTTgtggaactttttttttccaggcgGGTTACTGTGGCACCAGGGTACTGTTACactgaaagagacagagagacaggtttcaGTTCAGTTCTGTTGTTTACTGAGGCTGCACAGACACTGGACTGTTCATGGGGTGTACGGTCTGTCCTGTCTTGATGCCGTTACCATAGCAAAATGACCCTGAACACCCAAAGAGAGAAGCAGCCCCTgcggcggcgaggcagcacgcCGATTCCTCCCACCTACTTCTACCAGCACCCGTCCTGGACTCAGGACCTTCAGGACCCTCGGCTCCCCGGCAGCACCCAGTCGGACCCCGAGCAGCCGCGCCCCCAGCGAAGCCACCCTCCTCTGGGACAATCGGCGTCCTACCACCCTGGAGACAAGTCACTCCACTACCGCGCCCAGTGGAGCTCAGACTCGGACGACGACTCTCAAAGCGACTCAGATTGTGTTTACAGAGTGGTGTTGCTCGGTGACCATGGCGTTGGAAAGACCAGCCTCGCAGGAATCTTTGCCGGGatcacagagaaagaggaacaaCCTGGAGAGGACACATACGAGCGGACACTGTCAGTAGATGGAGAGGAAACCACACTCATCGTCATGGATACCTGGGAGAACGACAAActggaggaagaggacgacTGCTCTCGGGACGACTGTCTGAAGGTTGGTAGTGCCTACGTCATTGTCTACTCCGTCACTGACCGCTCTAGCTTCGACGCCGCTGCTGAGCTTCGTATCACACTGCGACGCACCCGCCAGGCCGAAAACCTTCCCATCATTCTCGTGGGCAACAAGAGTGACCTGGTCCGGTCCAGAGAAGTCGCAGTGGAAGGtgggggtcagaggtcacagtGGAGGGCCGAGCATGTGCTGTGGTATTTGACTGCAAGTTCATCGAGACGTCGGCGTCTCTGCAGCACAATGTGACCGAGCTGTTCGAGGGCGTGATCCGACAGATCCGCCTCCGCCGGGACGGCGGCGAGGCCGTCCAGCGCCGATGCTCCATCTACAAGCGCAAAGAGAGTCTCACTCAGAAGGCTCGGCGCTTCCTGGAC

Function

symbol description
rem1 Enables calcium channel regulator activity. Predicted to act upstream of or within negative regulation of high voltage-gated calcium channel activity and signal transduction. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in nervous system; neural tube; segmental plate; and somite. Orthologous to human REM1 (RRAD and GEM like GTPase 1).

NR:

description
PREDICTED: GTP-binding protein REM 1

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07847 REM1; Rad and Gem related GTP binding protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797753.1 True 1806 mRNA 0.52 5 28904998 28915648
XM_039797754.1 False 1165 mRNA 0.57 5 28904999 28914985

Neighbor

gene id symbol gene type direction distance location
pnp4a LOC103367714,LOC101478937,LOC106510859 coding upstream 13638 28884576 ~ 28891360 (+)
LOC120557430 LOC104950703 coding upstream 49265 28837250 ~ 28855733 (+)
LOC120557435 NA coding upstream 182792 28720911 ~ 28722206 (+)
rnf207a rnf207 coding upstream 264309 28612540 ~ 28640689 (+)
LOC120558056 NA coding upstream 535874 28366910 ~ 28369124 (+)
LOC120557450 NA coding downstream 10074 28925722 ~ 28949327 (+)
st3gal8 NA coding downstream 34829 28950477 ~ 28986588 (+)
c4h6orf89 clg5h6orf89,LOC103369827,LOC104961369,LOC104933301,LOC101474837,LOC102304616 coding downstream 285192 29200840 ~ 29207769 (+)
LOC120557724 cenpp,LOC104951285 coding downstream 569519 29485167 ~ 29595866 (+)
zgc:153675 LOC104941726,LOC100706129,LOC106954467,LOC103130791,LOC107080719,LOC105920322,LOC101469258,LOC103464637 coding downstream 714451 29630099 ~ 29636640 (+)
G42355 NA non-coding upstream 4873 28899827 ~ 28900125 (+)
G42345 NA non-coding upstream 23684 28880844 ~ 28881314 (+)
LOC120557449 NA non-coding upstream 68094 28830608 ~ 28836904 (+)
G42249 rpl22,LOC104952292 non-coding upstream 293496 28610217 ~ 28611502 (+)
G42230 chd5,LOC102784485 non-coding upstream 343734 28560794 ~ 28561264 (+)
G42362 NA non-coding downstream 1987 28917635 ~ 28918195 (+)
G42365 NA non-coding downstream 4012 28919660 ~ 28920283 (+)
LOC120557469 NA non-coding downstream 77818 28993466 ~ 28996272 (+)
G42403 NA non-coding downstream 161316 29076964 ~ 29077256 (+)
G42425 NA non-coding downstream 268490 29184138 ~ 29185612 (+)
ephb2b LOC104917933,LOC103376520 other upstream 1081738 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 2140261 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 2356199 26542507 ~ 26548799 (+)
G41825 NA other upstream 2631683 26268602 ~ 26273315 (+)
LOC120558088 LOC104941431 other upstream 2997260 25904769 ~ 25907738 (+)
G42449 NA other downstream 324765 29240413 ~ 29242253 (+)
ergic3 ergic3,LOC102788871 other downstream 1193887 30109535 ~ 30135834 (+)
G43045 NA other downstream 3544484 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 3555147 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 4122286 33037934 ~ 33041311 (+)

Expression


Co-expression Network