LOC120557460 (LOC104959439)


Basic Information

Item Value
gene id LOC120557460
gene name LOC104959439
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 11881185 ~ 11898847 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797799.1
GCTATATTTTGCATCCTAGCACAGAACAGAAAGGACTAAAGCGCTGTCATCTCGGATGACCACTGATCAAGTGGAAAGTCCTATTTAGCTTAGCAGCTCGACTGTACCAACTTTTGTGTCTCATCTCGGTTGTCAAAGCTAACAAAATGTAGCCCTACGTCTCCAGATAGATATGGAGGGGTTAAGTGACCCCAGCCTTAAGAGGCGACCAAGCATTCTGGGGAATGCAGATGAAAGGTTCCTCTGGTGGAAATGGAGGTAAAGTTTCTTGAGACTTTTCCTGAGTTCCAGTGGTGGAAAAAAATCTATTATAGTGGTGTTGTATGGCAGAAGGGAGGTCAAGGGGACACAGCCTGGTTGGGAAGGGACATCTGCATCCTTCACTCTGGTCCCAAACCATGAATATTGTGGGCCAGTTTGCGGAGACGGTATTTGTGACGGTGAAGGAGCTGTACGTACGGCCTTTAACCCCGTCACTCACCGGAGGGATCGATGTCATTGTGGTGCGACAGCCTGATGGATCGTTCCAGTGTTCCCCCTTCCACGTCCGCTTTGGCAAGCTGGGTGTGCTGCGTTCCAAGGAGAAGATTGTGGACATTGAGATCAATGGAGAATCAGTTGACCTGCACATGAAGCTGGGTGACAATGGAGAAGCTTTTTTTGTGgaggaaaatgaaaacaaggAGTCCCAGGTCCCAGCCCATCTGTGCACCTCCCCAATTCCTCTTGAGGTCCCTGAGGAGATCGAAGAAACCCCTGAGGGATCCTCCATCACCGGATCTGGCGCCCGCAGGAAGAAACGTCGCCGCAAACGCATGCGTTCTGATACTCACCTGAGAGAAGAGGCCAGCTCCTCATcagatgagagagaaagagagaaggagtgggagagagaaagtgatCAGGCCGGGCAGGAAAGCCCTGCTAAAGAAGAGTCCGTCACACCATTGCAACTCAGtaAATCAGTGTACTACTCGCTATCTGAGGAGACAAATGAGATGCTGGGGGCCACACAGACCAGAGGCACTCATCCACACTCGGATGGAGAGCAGTCACCCATGGAAAGTGTGTTCTACAGCCGGCCATCATCTCCTAAGAGCGACTCCGAGCTCCTGGTTAGACCCGTAGAGTCGTCTGGGCCTCAGATGCAGTGGAACTGGGGAGGTTTTCCCATgCTGTGTCAATCTGAAAGGACACCAGTGGAGTTACAACATATCTCCCCTTCCAACCGTTCTCATTTCCGCACCATTAAGAGACAGGACTCCTTTGACAAGGACTATGAGCCTGTGATCAGCTGTGGCAGAGTGGGCAGTGTAACAGTGGTCCGGCCACAGCCCAGGACTCATTCCCCAGACCTAGGTAGCGACACTATGCAAACCGACCCATTATATATGGAGGAAAACTCTTACACTACCCATTCAACCCCCACTGACCTCTCCAAGTCTTCAGCGGAGACTAATGTGGACTCAACACAGGCACTTGAATTCACATTCAGGGAAGAGGAGAACAGAgaatcatcatcttcttcttcagctAATCTAATTAACGGTACAGATTATCTTGCTAGCAAAGAAAGCACGATCAGTGTTGTTCATAATAGCACTGTGACTGACAGTGTGAGCAAACCAAACAACGCACGAATAAAACTCATTAATGAGAGCAAAGACTGCACAATCACTGCAACAAGTCCAAGTAGTACAGAGTTATCAAATCCACAACCGCAGGGTACCTTATCGGTGCAATGTGAACAGGGTTCCACCAGTAGTGCCCCTGTCAGCGAGGGGGACACTGGGATAGATCCCTGTGCTGAGGTAGGGGAGGAGGACTGTGGACCTGGAGGGACTGAAGGGTCAGCGGGAGGCTCACTAACCAACAAAACAGAGGGGTTAGCGAACCCTTCTGAGGCATCCTCCAAAGTAGAGCAACAGGACAAGAAGAAAGGTAAACGTAATCACCATCTAGGACCAACAGATATTTACTTGGATGATCTGACCACGTTGGAACCTGAGGTGGCTGCACTCTACTTCCCCAAGAGTGAGACAGAGGGAGCTTCTCAGCACGGGGCGGAGCAGGGCTCCTGCTCAGGGAGCCAGTCGCCTCAGTCAGTGGGCAGCGGGGCCATGGACAGCGGTACAGAGTACCTGTCCGATTCCACCTCCTACAACATGGACATCAGCATGTCCCTCTGCGGACAAGAGGGCGACACCAGCCAAATCACTAAAGAAAAGTTTATGGCGCACATTGTGACCTACCAGGATTTTGCCAAAAATCCAGGAATCATTGAGGATCCAAACCTTGTGATCTGCATCAACTCCAACTATTATAATTGGGCAGTGGCTGCTCCAATGGTCTTGTCAATGACAACGTTCCAGAAAAGCCTTCCAAAGAGTACGATAGAGCGGCTGGTGAAGGACAAGATGCCCAAAAAGTCTGGACGCTGGTGGTTCTGGAGGAGAAGAGACATGGACAATAATCAGCAAAAGAACTTAAAGGAGGAGCAAGAGGAGCCGCTGGCAATAGTTTCTTCCACAGTAAAAGCCACGTTGGATGACATCGACAGTGATGAAGTGGCGGGCCTCGGCCGAAAAGCCATGATTCCTTCCAGCCTATCAACAGAAACCCTCAGCGCCACTCAGTGTATCACCCAGATGTACCGCAAATCACTACGTCTGACCTCTAATCAGATAGAGAAGTTAAACCTGCGTGAGGGAGCCAACAAGGTGGTGTTCAGTGTGACCACACAATACCAAGGCACCTGCCGCTGTGAGGCTGCCATCTACCTGTGGAAGTGGGACGATCGAGTCATCATATCAGACATAGACGGCACCATCACTAAGTCTGATGCTCTGGGTCACATTCTACCTCAGTTTGGAAAAGACTGGACACACAAAGGCATCGCCAAACTCTACCACAAAATACACCAAAATGGCTATAAGTTCCTGTATTGTTCAGCACGGGCCATAGGTATGGCTGCCATCACTAAGGACTACCTTCAGTGGGTCAATGACCAAGGCATTGTCCTCCCTCAAGGCCCTGTACTGTTGGCCCCAAGCAGCCTCTTTTCAGCACTACACAGAGAGGTTATTGAGAAGAAGCCGGAGGTGTTTAAAATTGCCTGTCTCAGTGACATCAAGGACCTGTTCAACCCACAGAGAGAGCCCTTCTACGCGGCCTTTGGCAACAGGACTAACGATGCTTATGCCTACAAGCAGGTTGGGGTGCCTGATACCAGGTTATTTACCGTCAACCCAAAAGGAGAACTCATCCAGGAGAGGAGTAAAGTCAACAAGTCCTCGTACAGCCAACTCAGTGAATTGGTGGAACATTTCTTCCCCATGCTGTCTGTCGGGAGCAGCACATCCTCTGCTTTGGACTGTCCCGAGTACAGCAGTTTCTCCTATTGGAAGGAGCCTCTGCCAGAACTGGACCTGGATGCACTACTgtagacacacacccacatctacaccacacacacaagttttatAGCAAGCATATATACTCtctttgtttacttttttttttcccctgaaaGGCATAAGACTTCCCAGAATGCCTGAATACTGCCTTTGATAGACCTGCCAACTATAGTGCCTGTTTACAAGACACTGAATAAACTGGAACAGAAAGAGGCGACTGTCCCGTCTAATAAAGATCGAGCCAAATTAAATCATAATATGCATGGACTCAACATTTCAAACTTAAGTGTAAAAACATTATGCAGTACTTAATCTCAGTGCACACAATATTTAGCTATTTTAATGTGTAAATCCTACAATGAACATGACACAACTGGACAAATATGCCCTTGGactgttttagttttttgttattgtgtgtcgTATCCAGTATCATAGTCATTCCAAAATATGGATTTGAATTGTATTAGTAGAACACTGTCGCACATTTCAGCTCCAAATACTtaccaaaaacacatttgtataAAAATGTAGTTGTATTAGATACGTATTGTATATTAGTGATGCCTAAATTCTGCACATACATAAAACTATTGCCTGTTTTCTGTGACTGACCTGGAAATTGTCAGGTCACTGCTCTGAGCTCATGCTCTGAGTTCAAATAGACCCAAGTACACACAGCTACAAAACAAACCTGTTATCCTTCATTCAGTTGAGATTGTATCTAGTGGAGGGAGGGTTTCTATAGCTCCATGTACCAAGCAACCAAATatggtgtgagaatgtgtttaaaAAGCTTTGGATTATTTAAAGTCTGTTTGACCCTAATAAGTACGAGATAACTGGGTTTCGCCCTGAGCAATGTTGAGCtatattctgtttttgtcaAGCAGCAATGTTTTCTGTTTACATTTGACTCACCTGAGTCCTAAGTAATCAGAGCTTTGAATGGGAAGCTAGCTATAAGGTGCGGTAACTGCTAAATCAAAGCCTGCAGATGAATATGGAGTATGAGTTGGTTGTAAGGGACAATAGCAGTATTTTTTCTTAATACCTGAGGACTGCAATACACGATCTGAGCAGATGATCATTGTGAAACTACAACATACCTTCCTTTCAGGTACCGTAATACCAAGTTTAGAAGTGTTTGTACACTACATAAATGCGGAGGTGGGCCAGGCAGacatcactttttatttttatttagtgtAAACAGACCTTGGAGGGGAACAGTAGTGGTTTAGCCTGGCGCCGTGCCTTTGTACTATAATGActgttatatttattgttttttgcatATCTTATCATCCAAATATGTGGAAATGCATTGGAGCTGAGGATTTTGCTGTTACTTTTTAAACCAATTGTatagaaatatataaatttaaaataaagcacCACCTGTTATCTTT
>XM_039797800.1
TTGACTTGTTTTGCGCGCAGGCGCAGTATACTAGGATGTGTTCTGGATGGCTGTTGTTTGCCGTTTGCTCAGTCAGAAAAGCGACCTGAAAGTCCCAAACCATGAATATTGTGGGCCAGTTTGCGGAGACGGTATTTGTGACGGTGAAGGAGCTGTACGTACGGCCTTTAACCCCGTCACTCACCGGAGGGATCGATGTCATTGTGGTGCGACAGCCTGATGGATCGTTCCAGTGTTCCCCCTTCCACGTCCGCTTTGGCAAGCTGGGTGTGCTGCGTTCCAAGGAGAAGATTGTGGACATTGAGATCAATGGAGAATCAGTTGACCTGCACATGAAGCTGGGTGACAATGGAGAAGCTTTTTTTGTGgaggaaaatgaaaacaaggAGTCCCAGGTCCCAGCCCATCTGTGCACCTCCCCAATTCCTCTTGAGGTCCCTGAGGAGATCGAAGAAACCCCTGAGGGATCCTCCATCACCGGATCTGGCGCCCGCAGGAAGAAACGTCGCCGCAAACGCATGCGTTCTGATACTCACCTGAGAGAAGAGGCCAGCTCCTCATcagatgagagagaaagagagaaggagtgggagagagaaagtgatCAGGCCGGGCAGGAAAGCCCTGCTAAAGAAGAGTCCGTCACACCATTGCAACTCAGtaAATCAGTGTACTACTCGCTATCTGAGGAGACAAATGAGATGCTGGGGGCCACACAGACCAGAGGCACTCATCCACACTCGGATGGAGAGCAGTCACCCATGGAAAGTGTGTTCTACAGCCGGCCATCATCTCCTAAGAGCGACTCCGAGCTCCTGGTTAGACCCGTAGAGTCGTCTGGGCCTCAGATGCAGTGGAACTGGGGAGGTTTTCCCATgCTGTGTCAATCTGAAAGGACACCAGTGGAGTTACAACATATCTCCCCTTCCAACCGTTCTCATTTCCGCACCATTAAGAGACAGGACTCCTTTGACAAGGACTATGAGCCTGTGATCAGCTGTGGCAGAGTGGGCAGTGTAACAGTGGTCCGGCCACAGCCCAGGACTCATTCCCCAGACCTAGGTAGCGACACTATGCAAACCGACCCATTATATATGGAGGAAAACTCTTACACTACCCATTCAACCCCCACTGACCTCTCCAAGTCTTCAGCGGAGACTAATGTGGACTCAACACAGGCACTTGAATTCACATTCAGGGAAGAGGAGAACAGAgaatcatcatcttcttcttcagctAATCTAATTAACGGTACAGATTATCTTGCTAGCAAAGAAAGCACGATCAGTGTTGTTCATAATAGCACTGTGACTGACAGTGTGAGCAAACCAAACAACGCACGAATAAAACTCATTAATGAGAGCAAAGACTGCACAATCACTGCAACAAGTCCAAGTAGTACAGAGTTATCAAATCCACAACCGCAGGGTACCTTATCGGTGCAATGTGAACAGGGTTCCACCAGTAGTGCCCCTGTCAGCGAGGGGGACACTGGGATAGATCCCTGTGCTGAGGTAGGGGAGGAGGACTGTGGACCTGGAGGGACTGAAGGGTCAGCGGGAGGCTCACTAACCAACAAAACAGAGGGGTTAGCGAACCCTTCTGAGGCATCCTCCAAAGTAGAGCAACAGGACAAGAAGAAAGGTAAACGTAATCACCATCTAGGACCAACAGATATTTACTTGGATGATCTGACCACGTTGGAACCTGAGGTGGCTGCACTCTACTTCCCCAAGAGTGAGACAGAGGGAGCTTCTCAGCACGGGGCGGAGCAGGGCTCCTGCTCAGGGAGCCAGTCGCCTCAGTCAGTGGGCAGCGGGGCCATGGACAGCGGTACAGAGTACCTGTCCGATTCCACCTCCTACAACATGGACATCAGCATGTCCCTCTGCGGACAAGAGGGCGACACCAGCCAAATCACTAAAGAAAAGTTTATGGCGCACATTGTGACCTACCAGGATTTTGCCAAAAATCCAGGAATCATTGAGGATCCAAACCTTGTGATCTGCATCAACTCCAACTATTATAATTGGGCAGTGGCTGCTCCAATGGTCTTGTCAATGACAACGTTCCAGAAAAGCCTTCCAAAGAGTACGATAGAGCGGCTGGTGAAGGACAAGATGCCCAAAAAGTCTGGACGCTGGTGGTTCTGGAGGAGAAGAGACATGGACAATAATCAGCAAAAGAACTTAAAGGAGGAGCAAGAGGAGCCGCTGGCAATAGTTTCTTCCACAGTAAAAGCCACGTTGGATGACATCGACAGTGATGAAGTGGCGGGCCTCGGCCGAAAAGCCATGATTCCTTCCAGCCTATCAACAGAAACCCTCAGCGCCACTCAGTGTATCACCCAGATGTACCGCAAATCACTACGTCTGACCTCTAATCAGATAGAGAAGTTAAACCTGCGTGAGGGAGCCAACAAGGTGGTGTTCAGTGTGACCACACAATACCAAGGCACCTGCCGCTGTGAGGCTGCCATCTACCTGTGGAAGTGGGACGATCGAGTCATCATATCAGACATAGACGGCACCATCACTAAGTCTGATGCTCTGGGTCACATTCTACCTCAGTTTGGAAAAGACTGGACACACAAAGGCATCGCCAAACTCTACCACAAAATACACCAAAATGGCTATAAGTTCCTGTATTGTTCAGCACGGGCCATAGGTATGGCTGCCATCACTAAGGACTACCTTCAGTGGGTCAATGACCAAGGCATTGTCCTCCCTCAAGGCCCTGTACTGTTGGCCCCAAGCAGCCTCTTTTCAGCACTACACAGAGAGGTTATTGAGAAGAAGCCGGAGGTGTTTAAAATTGCCTGTCTCAGTGACATCAAGGACCTGTTCAACCCACAGAGAGAGCCCTTCTACGCGGCCTTTGGCAACAGGACTAACGATGCTTATGCCTACAAGCAGGTTGGGGTGCCTGATACCAGGTTATTTACCGTCAACCCAAAAGGAGAACTCATCCAGGAGAGGAGTAAAGTCAACAAGTCCTCGTACAGCCAACTCAGTGAATTGGTGGAACATTTCTTCCCCATGCTGTCTGTCGGGAGCAGCACATCCTCTGCTTTGGACTGTCCCGAGTACAGCAGTTTCTCCTATTGGAAGGAGCCTCTGCCAGAACTGGACCTGGATGCACTACTgtagacacacacccacatctacaccacacacacaagttttatAGCAAGCATATATACTCtctttgtttacttttttttttcccctgaaaGGCATAAGACTTCCCAGAATGCCTGAATACTGCCTTTGATAGACCTGCCAACTATAGTGCCTGTTTACAAGACACTGAATAAACTGGAACAGAAAGAGGCGACTGTCCCGTCTAATAAAGATCGAGCCAAATTAAATCATAATATGCATGGACTCAACATTTCAAACTTAAGTGTAAAAACATTATGCAGTACTTAATCTCAGTGCACACAATATTTAGCTATTTTAATGTGTAAATCCTACAATGAACATGACACAACTGGACAAATATGCCCTTGGactgttttagttttttgttattgtgtgtcgTATCCAGTATCATAGTCATTCCAAAATATGGATTTGAATTGTATTAGTAGAACACTGTCGCACATTTCAGCTCCAAATACTtaccaaaaacacatttgtataAAAATGTAGTTGTATTAGATACGTATTGTATATTAGTGATGCCTAAATTCTGCACATACATAAAACTATTGCCTGTTTTCTGTGACTGACCTGGAAATTGTCAGGTCACTGCTCTGAGCTCATGCTCTGAGTTCAAATAGACCCAAGTACACACAGCTACAAAACAAACCTGTTATCCTTCATTCAGTTGAGATTGTATCTAGTGGAGGGAGGGTTTCTATAGCTCCATGTACCAAGCAACCAAATatggtgtgagaatgtgtttaaaAAGCTTTGGATTATTTAAAGTCTGTTTGACCCTAATAAGTACGAGATAACTGGGTTTCGCCCTGAGCAATGTTGAGCtatattctgtttttgtcaAGCAGCAATGTTTTCTGTTTACATTTGACTCACCTGAGTCCTAAGTAATCAGAGCTTTGAATGGGAAGCTAGCTATAAGGTGCGGTAACTGCTAAATCAAAGCCTGCAGATGAATATGGAGTATGAGTTGGTTGTAAGGGACAATAGCAGTATTTTTTCTTAATACCTGAGGACTGCAATACACGATCTGAGCAGATGATCATTGTGAAACTACAACATACCTTCCTTTCAGGTACCGTAATACCAAGTTTAGAAGTGTTTGTACACTACATAAATGCGGAGGTGGGCCAGGCAGacatcactttttatttttatttagtgtAAACAGACCTTGGAGGGGAACAGTAGTGGTTTAGCCTGGCGCCGTGCCTTTGTACTATAATGActgttatatttattgttttttgcatATCTTATCATCCAAATATGTGGAAATGCATTGGAGCTGAGGATTTTGCTGTTACTTTTTAAACCAATTGTatagaaatatataaatttaaaataaagcacCACCTGTTATCTTT

Function

NR:

description
PREDICTED: phosphatidate phosphatase LPIN2-like, partial

GO: NA

KEGG:

id description
K15728 LPIN; phosphatidate phosphatase LPIN

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797799.1 True 4828 mRNA 0.46 20 11881185 11893397
XM_039797800.1 False 4531 mRNA 0.46 20 11881185 11898847

Neighbor

gene id symbol gene type direction distance location
zgc:123305 LOC103368761,LOC104959439 coding downstream 679 11868137 ~ 11880506 (-)
trim107 NA coding downstream 13787 11863536 ~ 11867398 (-)
tpra1 tpra1 coding downstream 18350 11855465 ~ 11862835 (-)
LOC120557715 NA coding downstream 26041 11780162 ~ 11855144 (-)
LOC120557709 plxna1 coding downstream 142196 11531403 ~ 11738989 (-)
LOC120557464 tgif1,LOC103375645,LOC108230274,LOC106534656,LOC107382471 coding upstream 9249 11908096 ~ 11915087 (-)
vstm2l LOC103354992 coding upstream 229145 12127992 ~ 12151687 (-)
LOC120558143 LOC104936998 coding upstream 298496 12197343 ~ 12201057 (-)
LOC120558222 LOC104936998,LOC102790234 coding upstream 324608 12223455 ~ 12227890 (-)
LOC120558156 LOC103354990,LOC100702519,LOC102310094,LOC102789952,LOC102196994 coding upstream 354224 12253071 ~ 12260784 (-)
LOC120557710 NA non-coding downstream 101151 11763081 ~ 11780034 (-)
G37670 NA non-coding downstream 130812 11750032 ~ 11750373 (-)
LOC120557711 NA non-coding downstream 137735 11741570 ~ 11743450 (-)
G37486 NA non-coding downstream 719514 11161134 ~ 11161671 (-)
G37485 NA non-coding downstream 723308 11157425 ~ 11157877 (-)
G37794 NA non-coding upstream 212257 12111104 ~ 12112004 (-)
G37812 krt18,LOC103386112,LOC107385534,LOC105931717 non-coding upstream 378024 12276871 ~ 12278670 (-)
G37813 NA non-coding upstream 384921 12283768 ~ 12286834 (-)
G37820 NA non-coding upstream 401386 12300233 ~ 12300493 (-)
G37822 NA non-coding upstream 424339 12323186 ~ 12373498 (-)
LOC120557334 cytl1 other downstream 538032 11340758 ~ 11343153 (-)
G37432 LOC106915059,LOC106958204,LOC102221633,LOC103464975,LOC100700174,LOC101482873,LOC102210230 other downstream 828100 11051299 ~ 11053085 (-)
LOC120557925 tmem233 other downstream 892367 10983070 ~ 10988818 (-)
fam219aa fam219a,LOC101484940,LOC100701621 other downstream 937546 10932235 ~ 10943639 (-)
tpgs2 tpgs2 other downstream 1344832 10532526 ~ 10536353 (-)
dlgap4b LOC103354995,LOC104959427,LOC102311431,LOC102791764,LOC101471735,LOC103464946 other upstream 17020 11915867 ~ 12041000 (-)
G37799 tgm2,LOC103354993,LOC105931743,LOC107088490 other upstream 224598 12123445 ~ 12124452 (-)
G37805 LOC104936998,LOC103354991 other upstream 317356 12216203 ~ 12217190 (-)
G37861 NA other upstream 594082 12492929 ~ 12496235 (-)
G37876 NA other upstream 684588 12583435 ~ 12584453 (-)

Expression


Co-expression Network