LOC120557490


Basic Information

Item Value
gene id LOC120557490
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 35004942 ~ 35006128 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797860.1
CCAAGGCATGCCAAGGAAAACTGCTCCACTAATAACAACCATGGGAATAGCAGGGGGTGTACCATTAGTAGACAGTGCCTTTGGAAAAGTCCAAGAAGGTAGTGTTCTCTCCTACCATCTTCCAGCATGGACTCCACCAATGACATATCTACATGCGACTGCACCACCAAGACCATCCTTACCTCTTGATGGTTACTCTTTGGGGCCCTCGGAGTGTTGTTTTGTGCTTAACTACCATCAGCAGCTGCACATGAAATCTCTTCAAACATCAGAGATCATGGCGCACCAACTTGAGGAAAGCACAAGACAACAGAGCACACTGAAGGAATGGCACCTTCTAAGAAAGCCACGAGTGACTTCCTCTAGATTCAGAGAGGTTTGCCATGTGAGAGGACAGTCCTCAGCGGAGAACCTGGCACTCAGGATTTTACGGCCAGGTTATCAGACCGCAGAAATGAAGAGGGGTCTTCAGATGGAGTCCAAGGCTGTAGAAGAGTACTGCCTTGTTAAGGATGTAAACCACTATCCTTGCGGTTTCATCATCCACCCAGATGCACCATGGCTCGGGTCATCACCAGATGGGTTGGTATACGACCCGAATGCCGAGCCTGCGTTTGGACTGCTGGAGGTGAAGTGTCCTAATGTGAGAAGCTATGTAGACTGTACGTACCTTAGGGTCTCCGATGGAGTGCTACAGCTAAAACCATCTCACACGTACTACTGGCAGGTACAGGGACAACTGCTCATTACTGGTCTGGAATGGTGTGATTTTGTTGTCTATGCAGAAGATGACATGTTCATTCAAAGAATATACAGGGATGGCAGAatcatgaaaacaatgaaagaaaaggttgatttcttctatttttacttttatctaCCTATGcttttggcttgaaaaaaaatcatgccaTTGACAGTACTTATTTCAATCAGTTTTAATCAGTTAGTATTTATTTTAGGTTTTAGTGTTAATTTGATCATCCATACACAACTCCTAAATAGCCATAAGTAAAATGAAGATCAGGCCTGCATAGATAGAGATACTTTATTAATCTgactgaaatgtatttaaattgttGACTGTAGAACATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797860.1 True 1095 mRNA 0.43 2 35004942 35006128

Neighbor

gene id symbol gene type direction distance location
LOC120557093 NA coding upstream 633848 34370229 ~ 34371094 (+)
LOC120557827 NA coding upstream 937600 34047432 ~ 34067342 (+)
znf831 NA coding upstream 964659 34026311 ~ 34040283 (+)
barx1 barx1 coding upstream 1239434 33760090 ~ 33765508 (+)
LOC120557830 LOC105888650,LOC105896821,LOC101068541,LOC103395674,LOC106527799 coding upstream 1486818 33516838 ~ 33518124 (+)
ube2v1 LOC103133159,LOC106912622,LOC102222270,LOC103465507,LOC104930303,LOC106519068 coding downstream 157356 35163484 ~ 35199996 (+)
LOC120556883 LOC104930311,LOC103370811,LOC104960357,LOC100711115,LOC101474327 coding downstream 268969 35275097 ~ 35278434 (+)
LOC120556789 LOC104930304,LOC100703713,LOC103370810,LOC102215223 coding downstream 310349 35316477 ~ 35319169 (+)
LOC120557477 LOC103375199,LOC104930306,LOC101473264,LOC108251201 coding downstream 420233 35426361 ~ 35452319 (+)
LOC120558245 NA coding downstream 433849 35439977 ~ 35440139 (+)
LOC120557494 NA non-coding upstream 174 35003472 ~ 35004768 (+)
G43737 NA non-coding upstream 6205 34996613 ~ 34998737 (+)
G43729 LOC100711384,LOC101475072,LOC102214007,LOC103373511 non-coding upstream 42759 34960653 ~ 34962183 (+)
G43723 NA non-coding upstream 63502 34941191 ~ 34941440 (+)
G43722 NA non-coding upstream 66348 34938395 ~ 34938594 (+)
G43811 NA non-coding downstream 220274 35226402 ~ 35226648 (+)
LOC120556905 NA non-coding downstream 331875 35338003 ~ 35338576 (+)
G43859 NA non-coding downstream 452579 35458707 ~ 35459016 (+)
G43874 NA non-coding downstream 523705 35529833 ~ 35530044 (+)
G43877 NA non-coding downstream 534347 35540475 ~ 35541252 (+)
G43656 NA other upstream 337760 34665236 ~ 34667182 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other upstream 1659136 33340284 ~ 33345806 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other upstream 1668175 33262195 ~ 33336767 (+)
G43277 NA other upstream 1792624 33187738 ~ 33212318 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other upstream 1963631 33037934 ~ 33041311 (+)
LOC120556915 NA other downstream 457644 35463772 ~ 35486235 (+)
G43924 NA other downstream 658015 35664143 ~ 35666041 (+)
trnac-gca_18 NA other downstream 956411 35962539 ~ 35962610 (+)
fezf2 fezf2 other downstream 1697127 36703255 ~ 36711295 (+)
plekha6 plekha6 other downstream 2954578 37960706 ~ 38096072 (+)

Expression


Co-expression Network