zgc:109965 (LOC103376131,LOC101485603)


Basic Information

Item Value
gene id zgc:109965
gene name LOC103376131,LOC101485603
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 10922393 ~ 10928985 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798033.1
GATTCCCAGGAGCTAGTTTGTGTCCACGCTGCAAGCAGTAGCACTGAAGTTGACGAAGACGTAGTAAGAAGGCTCATGAGACAGGAGCGCTGGGAGACAGATTGAGACCATTACGTAACTCAGGCAGGACGTGACATCATGTTGCTGAGAGACCTGAGTGTAGCCTCCGTGGTGCTGCTGCTCTGTGTCCAGTGTCTGCATGGATCGGCTCTCCCTGCTGTGTCCTTCTATGAGTTCACAGCCTACAGGATGCAACAGTACAACTTGGCACAACACAAGCACGGTTGCCGTGGAGCCATCGTGGTGGCGGAGGCACGCTCAGCGGAGGAGCCAGTGCTGACTCGCCGCTGTGTCATCATGAAGGTGCTGGACTTCACCACAGACAAATACCTTGAGGCCCAGAGGCAAAATGCTGCTGCCATCCTGATCCTGCTGCCCAAAAATATCTCCAGTATCCCCCACGACACTGTACAGTCCTTCATGGTGAGTGAGAGTAAAGCCTTGCTAAAGGAGACGCTCATGCCCGTGTATGTGGCGCCTGAGGATGAACAGCTGCTTTACATGTACGATGAGGTCAAGCAAGCTGCAGCCACCCGGACCTCATCTATATTCGTCAGAGTCCTTCGCAGCATGGTCACAGCTACAGCCTTTCAGATCTTAGTGAGCAACAGTGTCCCTATTAAGGGCTTCACTGACAATGCCATCGCCACACTGGAGGGGGTGCTTCCGGGGGCAGGGGAGGATGCACCCACTATTGTCATCACTGCCCACTATGATTCCTACGGGCTGGCACCATGGTTGGCATATGGAGCAGACTCTAATGGCAGTGGGGTCACCATCCTGCTCGAGTTGGCACGTCTCTTCCAGAAGCTTTTTAGTAGCCCAAGTACCATACCACCATATAATTTAATGTTCTCCTTAACCGGGGGAGGAAAGTACAATTTCCTTGGCACAAAGAGATGGATTGAAGAGAATCTGGACCATGCTGaGACCAGCCTGCTCCATGACAATGTGGAGTTTGTGCTGTGTTTGGATACACTGGCCAACAGTGATGAACTGTACATGCACGTGTCCCGCCCTCCTAAACCCGACACTCCCATGCACTCTTTCATGCAACAGCTGGAGGAGGTGGTGTCCTCCAGATTCCCCCATGTGAAGGTGGGACTGGTCCATAAGAAGATCAATCTTGTGGATTCCACAGTAGCGTGGGAGCATGAGCGCTACAGCCTGCGGAAGATACCAAGTTTCACTCTGTCACATCTGGAAGACCCCAAATCTGAGCTCCGTGGCTCCATGCTAGACACCATGTCACAAGTGGATTTCAGGAAAATGAAGCGTAACGGCATCATCGTAGCAGAAGCACTGGCACGTTATATGTACAATCTCTCTGGCAAGGGTTCACCAAAAGATCTTCAGGTTTTCAAAGGCCAATTGGACTTTCACGACGGTCGTATGTCCAGTCTGATGTCCTTCCTGACGTCAGTTCCTCGAGCCACCCAGCTGCTGGACAAGGAGCCCAGTCACATGCTGCTGGTTAACTCACTGGAGCACGAGTTCAAACGTTACCTGCAGCAAGTTCACAGACATGCCTTCCGACAGGACAGGAGGGACCCTGATATTACCTTTTTTGATCACATGAACCCACCAGTAGTGATGTACAGGGTGAAGCCTGCTGCCTTTGATCTCTTCCTCGGCGGCTGCATTGCTGCTTATTTGGGGATTGTTTACTATACCATTCAGAATTGTGGTTACCTCTACACAAAGCTCAAAGAAGCAATGAAATCCAAGCACGAGTAAATAAGACTGTGAATACTGAGTCTATGACAAGGCTGCATTGCGCATGTTGGAGCTCTGCTTCACTGGCTGTGCAGAACATGAAAGCAAGCAACAAGAATCTTCTAAGACTAATTGTATGCACAACTTATAAAGTTGtccttttgaaatgtattgcGTCCATAAATCCACTGTACTGTAAACCATTTCTTATATGAACAAACTGGAATTTTGAGAGATGTACTGTAAACACAATGAATAAAGGAGGAGTTTGAGATTT

Function

NR:

description
nicalin-1-like

GO:

id name namespace
GO:0009966 regulation of signal transduction biological_process
GO:0006508 proteolysis biological_process
GO:0016020 membrane cellular_component
GO:0008233 peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798033.1 True 2053 mRNA 0.50 16 10922393 10928985

Neighbor

gene id symbol gene type direction distance location
LOC120557901 NA coding downstream 539 10919026 ~ 10921854 (-)
myorg kiaa1161,LOC103376128 coding downstream 3401 10912657 ~ 10918992 (-)
celf4 celf4 coding downstream 283258 10554026 ~ 10639135 (-)
zgc:64106 LOC104941154,LOC108239814,LOC103386237,LOC103356394 coding downstream 401690 10501666 ~ 10520703 (-)
LOC120558250 NA coding downstream 428071 10494203 ~ 10494322 (-)
LOC120557231 LOC102299939,LOC100700987,LOC103139561,LOC102208776,LOC104921056 coding upstream 61474 10990459 ~ 11014552 (-)
LOC120557233 LOC104921055,LOC104965500 coding upstream 93249 11022234 ~ 11026338 (-)
LOC120558048 NA coding upstream 175949 11104934 ~ 11109726 (-)
loxl2a loxl2,LOC103366914 coding upstream 236788 11165773 ~ 11196385 (-)
tacc1 NA coding upstream 271185 11200170 ~ 11232830 (-)
G37364 NA non-coding downstream 261125 10660786 ~ 10661268 (-)
G37361 NA non-coding downstream 369012 10552293 ~ 10553381 (-)
G37321 NA non-coding downstream 432341 10488800 ~ 10490052 (-)
G37305 dcaf12,LOC102784774 non-coding downstream 465973 10453961 ~ 10456420 (-)
G37276 NA non-coding downstream 611239 10310109 ~ 10311154 (-)
G37418 NA non-coding upstream 37572 10966557 ~ 10974888 (-)
G37424 NA non-coding upstream 96150 11025135 ~ 11147436 (-)
G37482 NA non-coding upstream 218928 11147913 ~ 11154364 (-)
G37483 NA non-coding upstream 226586 11155571 ~ 11156612 (-)
G37485 NA non-coding upstream 228440 11157425 ~ 11157877 (-)
tpgs2 tpgs2 other downstream 386040 10532526 ~ 10536353 (-)
rhobtb3 glrx,rhobtb3,LOC102786935 other downstream 502487 10387917 ~ 10419906 (-)
LOC120556768 LOC104965754,LOC103359409,LOC102210396,LOC101479743,LOC102082439,LOC102300053 other downstream 916220 9998996 ~ 10006173 (-)
G37045 lrig1 other downstream 1526823 9394739 ~ 9395570 (-)
LOC120558079 fam19a1,LOC101482978,LOC107385433,LOC108244096,LOC103386186,LOC106518519,LOC101163164,LOC102209545 other downstream 1888726 8906439 ~ 9033667 (-)
fam219aa fam219a,LOC101484940,LOC100701621 other upstream 3250 10932235 ~ 10943639 (-)
LOC120557925 tmem233 other upstream 54085 10983070 ~ 10988818 (-)
G37432 LOC106915059,LOC106958204,LOC102221633,LOC103464975,LOC100700174,LOC101482873,LOC102210230 other upstream 122314 11051299 ~ 11053085 (-)
LOC120557334 cytl1 other upstream 411773 11340758 ~ 11343153 (-)
dlgap4b LOC103354995,LOC104959427,LOC102311431,LOC102791764,LOC101471735,LOC103464946 other upstream 986882 11915867 ~ 12041000 (-)

Expression


Co-expression Network