XLOC_005101 (aldoab)


Basic Information

Item Value
gene id XLOC_005101
gene name aldoab
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 4052180 ~ 4070058 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00009904
gcatttttttgcagtgtgtctcCCTCGCTCTCTGTCAGGCTGGGGAATGTTGCCACTCGTCTCGAGTGTCGGGATGGAGCTAATTTTAGCAGGACAGCTGAATGTGAGGGGTCATAATGCAGGATAAAACCAGTGGGCAGTCGGACATTCGTGGTCTGAGCCAGaacttttcttctctctctctctctctttctctccctcgcTTGAAGGCTCGCACCATTTTGTCTGTTCTCCTTTCAGCAACAGAgTAAAGATGCCTCACGCTTATCCATTCCTGAGCCCTGATCAGAAGAAAGAGCTGAGTGACATTGCTCAGAGGATCGTTGCTCCGGGAAAGGGAATTCTTGCTGCCGATGAGTCCACAGGCAGCGTAGCAAAGCGTTTCCAGAGCATCAATGCTGAGAACACCGAGGAGAACAGACGTCTGTACCGGCAGCTGCTGTTCACCGCTGACGACCGCATCAAACCCTGCATCGGTGGAGTCATCCTCTTCCACGAGACCCTCTATCAGAAGACCGATGATGGCAAGCTTTTCTCTCAGCTGATTAAGGAGAGAGGCATGGTGGTGGGAATCAAGGTGGACAAGGGTGTTGTGCCTCTGGCCGGCACCAATGGAGAGACCACCACTCAGGGTCTGGATGGTCTGTACGAGCGTTGCGCTCAGTACAAAAAAGATGGTGCTGACTTCGCTAAATGGCGCTGTGTGTTGAAGATCACACCCACAACTCCATCCAATCTTGCCATTATTGAGAATGCCAATGTGCTCGCCCGCTACGCCAGCATCTGCCAGATGCATGGTATTGTACCCATCGTGGAGCCTGAGATCCTGCCTGATGGTGATCATGACCTGAAGAGATGCCAGTACGTGACGGAGAAGGTTCTGGCAGCGGTGTACAAGGCTCTTTCAGACCATCATGTGTATCTGGAGGGAACCCTGCTGAAGCCCAACATGGTGACGGCCGGTCACTCCTGCTCCCATAAATACTCACCTCAGGAGATCGCCATGGCTACTGTCACAGCCCTGCGCCGCACCGTTCCACCTGCTGTCCCCGGCATCACCTTCCTTTCTGGAGGCCAGAGCGAGGAGGAAGCTTCAATCAACCTGAGCACCATCAACCAGTGTCCGCTGAGCAAACCCTGGGCCCTCACCTTCTCCTACGGACGGGCCCTGCAGGCCTCCGCTCTTAAAGCCTGGGGAGGAAAGAAGGAGAATGGCAAGGCCTGCCAGGAGGAATTCGTCAAGAGAGCCGTGAACAACAGCGCAGCAGCTGTCGGTAAATACGTCTCCAAAGGAGACACCGGAGCAGCGGCAGGAGAGTCTCTGTTTGTGGCCAATCATGCTTATTAAAGAAATACCAACGGCCACACTTCAACCGGCTCACTCATCTGTTCACTCATATGTGCACACACAGTCATGAATCACTCTTTCCAGCATACACACTTTCCACAATGATATAAGCATCATGATAGGTGACCAACTGATAAAGATAGCCTGCGTTTCCTCCATTTCAGCAACTTCTACGTTTGTTTTTTCATCTGTTCTTTTCACCATATATTTTCTATATCTGGCATAAGAATAAAGTATTAAATCATCAA

Function

symbol description
aldoab Predicted to enable fructose-bisphosphate aldolase activity. Predicted to be involved in fructose 1,6-bisphosphate metabolic process and glycolytic process. Predicted to be active in cytosol. Is expressed in adaxial cell; cardiovascular system; fin; musculature system; and somite. Orthologous to human ALDOA (aldolase, fructose-bisphosphate A).

GO:

id name namespace
GO:0030388 fructose 1,6-bisphosphate metabolic process biological_process
GO:0006096 glycolytic process biological_process
GO:0005829 cytosol cellular_component
GO:0016829 lyase activity molecular_function
GO:0004332 fructose-bisphosphate aldolase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-2299 Predicted to enable fructose-bisphosphate aldolase activity. Predicted to be involved in fructose 1,6-bisphosphate metabolic process and glycolytic process. Predicted to be active in cytosol. Is expressed in adaxial cell; cardiovascular system; fin; musculature system; and somite. Orthologous to human ALDOA (aldolase, fructose-bisphosphate A).

Ensembl:

ensembl_id ENSDARG00000034470

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00009904 True 1596 mRNA 0.51 7 4052180 4070058

Neighbor

gene id symbol gene type direction distance location
XLOC_005100 si:ch211-180a12.2 coding downstream 24101 3998764 ~ 4028079 (-)
XLOC_005099 si:ch211-136m16.8 coding downstream 59341 3981346 ~ 3992839 (-)
XLOC_005098 ppp4cb coding downstream 73838 3964351 ~ 3978342 (-)
XLOC_005097 eif3c coding downstream 89808 3944229 ~ 3962372 (-)
XLOC_005096 zgc:92040 coding downstream 111412 3926168 ~ 3940768 (-)
XLOC_005102 NA coding upstream 19679 4089737 ~ 4129820 (-)
XLOC_005103 NA coding upstream 73536 4143594 ~ 4169699 (-)
XLOC_005104 si:dkey-32n7.7 coding upstream 100863 4170921 ~ 4185554 (-)
XLOC_005105 NA coding upstream 119964 4190022 ~ 4194304 (-)
XLOC_005106 si:dkey-32n7.8 coding upstream 126435 4196493 ~ 4199728 (-)
XLOC_005094 NA non-coding downstream 186946 3860464 ~ 3865234 (-)
XLOC_005092 NA non-coding downstream 265798 3782621 ~ 3786382 (-)
XLOC_005087 NA non-coding downstream 482099 3569747 ~ 3570081 (-)
XLOC_005086 NA non-coding downstream 508164 3519168 ~ 3544016 (-)
XLOC_005083 NA non-coding downstream 767271 3281756 ~ 3284909 (-)
XLOC_005109 NA non-coding upstream 161799 4231857 ~ 4232505 (-)
XLOC_005111 NA non-coding upstream 204852 4274910 ~ 4287034 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000047_04012371_04020979 ALDOAA, ALDOA, ALD, ALDOAB coding CI01000047 null 4012324 ~ 4021255 (+)