LOC120557614


Basic Information

Item Value
gene id LOC120557614
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 17542208 ~ 17545551 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798134.1
GACACATTGTAAGCAAAGTGTGATTTTATTTAGAGCCAGTTAAAAGGTGTCCGATTGCTCTGTAAGCctaatcattttttttagaGGACTTTCAGCCTCTTTCATCAGGAGATGATTAGACTGACAACCACACTCCAATCACATTTGACCTTTGGACCTTAAACATGGAGCTCACACAGACCAAGAGAAAATAAAGGCAATGTGACCGTTTGGCTCACAGTAATTCAGCATTAACTGACTTATAGTTTCTGATCAGGTTCTTAAATTGAAATAGCATGAGTGAGAGATCATAGCacctttttttgtatgtgtcCCTGAGATATTACAaggaaaacaatgttttttccctTCTCCTGCATCCTGGGAACTTCTGAATGGACGTCTTTTGATTTAAACCCAACAGattgtttatttaaagGTCTTGTTGGTGCATGTGGAATATCCGTGCTGTACAATTTGATGAGAGTTTACCATTTCATTCAAACATGCAGTGATTCCGAGACTGAAATTGAAAGCAAACTGAAGACATCCTCACTTGGAAATCTGAGAGGGAACTGGACAACAGCTCTCCAGTTCTGGACCCTGACGGTCCTCCTGTCTCTGGTAAACTCGAGGGTTTCCTCTCTGATAGTGCTGGAGTTTtctctcagagctgtttctgtctgGGCATCAGCAGGACTGGATGCCAATGGCAGAGGCTTAGACCTACTCCTGATCCAGTGCCAGTTTCCCCTGGGTTGCGGCCTCACCTGTACTCTTGACTTCCTCCATAAGGGGGCTCCACACAGCTCCCTCAGCTTGTTTCTGGCAGCTGCTCTCAGCTGGGCACTGGCAAGTGTTGGCCACAATCTGTGGAGCCATGTGGCCAGACTTTACCCACTACATAGCAGAGAGCGTTACTGTGGGAAGTGCATCACCCTCCTGGCCTCTGGACACACCATACTGGCTTCACTGCAAAGAGCGGTTGTCTTGGCCTTTGCTCTAGCAACTGTGGCTTACACCAGTACGATTTATGACCAATTCCTGTCCCAGAAGGATGCTCTAAAGTTTTGGATTCCACTGACACTCTGCTACGCCATGTTGGTGGTCTACATTCAAGataatcagcagcagcagcctggcATAGATGTCCTGCTGCACACTGTCTTGCTGCGAATGGGAGCCTTACTGGTGCTCATGCTGATGGTGGGCAACTGGTCTGATGTCCTCCATGTCCTCATCACTTTCCCTGGTGAAGCAGTCTGCCTGCTGCCCTCTCGGGACCTGCTGAAAGCTGCGTTAAAGGAAGAAGAAGACACAAGCTTGAGAAAATATGAACAGCGCTCCAGttacaaaacaatgaaaacatcaTCAGCTGACAGCTGATGTTGAACCCAAAATCTACGTTAAATACCAGAGACTACCTCAAATGTCAAGATGTgatgataaaacaataaaaggaTTATTGTGGCCACACTTGTTGGCATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798134.1 True 1469 mRNA 0.46 6 17542208 17545551

Neighbor

gene id symbol gene type direction distance location
slc25a34 slc25a34,LOC104928013 coding upstream 70 17533065 ~ 17542138 (+)
fbxo42 fbxo42 coding upstream 10757 17525015 ~ 17531451 (+)
mfap2 mfap2 coding upstream 55331 17480859 ~ 17486877 (+)
sdhb LOC106929635,LOC103130297,LOC107085616,LOC105927147,LOC103465156,LOC103357925 coding upstream 62116 17473313 ~ 17480092 (+)
LOC120557636 NA coding upstream 79486 17458924 ~ 17462722 (+)
fblim1 LOC104949010 coding downstream 3972 17549523 ~ 17555364 (+)
si:ch1073-335m2.2 LOC104949008,LOC103357917 coding downstream 12369 17557920 ~ 17578916 (+)
ndufaf3 ndufaf3 coding downstream 57106 17602657 ~ 17605094 (+)
LOC120557609 tmem43 coding downstream 64765 17610316 ~ 17617948 (+)
LOC120557612 NA coding downstream 95095 17640646 ~ 17644905 (+)
G39522 NA non-coding upstream 10284 17531522 ~ 17531924 (+)
G39516 NA non-coding upstream 29377 17510870 ~ 17512831 (+)
G39509 NA non-coding upstream 40984 17500063 ~ 17501224 (+)
G39489 NA non-coding upstream 75612 17466087 ~ 17466596 (+)
G39484 NA non-coding upstream 77430 17463538 ~ 17464778 (+)
G39533 NA non-coding downstream 44159 17589710 ~ 17590985 (+)
G39579 NA non-coding downstream 60272 17605823 ~ 17606816 (+)
G39580 LOC103357913,LOC102778940 non-coding downstream 61414 17606965 ~ 17607514 (+)
G39588 rhoaa,LOC106583462,LOC103374076,LOC105900164,LOC107679616,LOC105026930,LOC107591788,LOC108265880 non-coding downstream 75172 17620723 ~ 17622507 (+)
G39626 LOC103357902 non-coding downstream 139443 17684994 ~ 17686581 (+)
LOC120557637 minos1,LOC103357934 other upstream 164648 17371483 ~ 17377560 (+)
srsf3b srsf3,LOC104948713,LOC103465186,LOC102226051,LOC103150674 other upstream 343991 17193151 ~ 17198217 (+)
G39351 NA other upstream 422318 17112113 ~ 17119890 (+)
LOC120556687 LOC103362900,LOC104950925,LOC102306361,LOC100693144,LOC103362894 other upstream 495512 16964617 ~ 17046696 (+)
G39116 NA other upstream 998628 16517536 ~ 16543580 (+)
G39581 LOC104949003,LOC103357913 other downstream 62379 17607930 ~ 17609216 (+)
LOC120556838 NA other downstream 174890 17720441 ~ 17734011 (+)
wnk2 wnk2,LOC104946158 other downstream 359147 17904698 ~ 17930118 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other downstream 644031 18189582 ~ 18194911 (+)
LOC120557740 acy1 other downstream 670155 18215706 ~ 18226578 (+)

Expression


Co-expression Network