fndc10


Basic Information

Item Value
gene id fndc10
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 17449728 ~ 17452057 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798135.1
TGGGATGCTTTGGTTAAAACCCTCCATCCCTCAGCGTTGTCGGGATCCTGGTTGTTTTCTCCGTTATTGACAGAGACCTGAAGCACTGTGTAGGATGATGACTCACAAACCGACTGTTGATGACTACAAATATCTATTTTGTGCACGCACCCACGCTCCCAATCACACCGCGGCGCGCGCTCCTCCACGTGCACTCTCGCACAGCAGGAATCAAACCCTTTACGTCAAGCCAGACAGGAAGGCGAAAGCGAACCTGATGGTCTGATAGCCGGGGTCCTCTCCGAAACAAATGCAGACCCGCTCCTCTCGCCCATGGACGAGCTATCCCTTTTCACACGGATTTCGTCGTGTGCACTGAGGCAGAGTTGATCTTATGGCAGACATCAGCCCGCCTTGTACCATCGCCCATCTGATCCACTGTGAGAGAAAATAATTCGACGAGAGGACGTGAGATGAAAAGCCAAAAACGACCATCACTGCTCGCCTTATCGGCACTCCTGCTCTGCACATTACACCAGACAGCTGGGTCCAGCAGATCTCATCGCAGCAGCACAgcatcatcaacaacaacatcCTCATCAGAGGCTAGAGGCAGGAATCATTTGGGGACCCAAAACTGGCTAAAAACGACAAACATCAGTTCTAATGGCAATCACAGCCACGATAATAGGCCAAATAAGCTAAAAGAGGCAATGGGGCAAGTGAATAGCTTCTCTTTCAACACCAGCAGAGGCAATATGACTACTGTGATAACGGAAAGGTCTGGCAGGGCACCAAACTGGAGCCGGGAAGAAGGAGTGTCACCACTGTGTGCCTACCGAGTGATTGAGGGAGGTATTGGGGGCCAGCTGTGTTTTCGACACACACTGTTTGGGTACAAGTGTCACAAGGGAGACTGCAGGACAGTGGTGTCTTTCAGGAATCTGGTGGCAAATATTCTCATCAATGGCAGTGTACTGTTACAGTGGACCCATGAGGGAGAATCCACAATGACTGGCCGAGACGTAAAGACAAAAGAGACTGTAGCTGGTCAGAAGGGCGATGGGGATCCAGGGACAAATTTAACAAGAAAGGAAAGCTCAAAGGCTGCTTTCAGTGGCCGACGACACAAGCGTGGAGGCTATGAGTTAAGCTGCTGGTGGAATGGAAGCTATACTCAATTTGAGTGTGCTGGTGTCCATCTCGGATCTGGCTGCAGGGACTTTCTCCTGATTGAGCTGCATGAGAACATCCCCTACCGCATCTGCCTGCGCTCCCTGGCCCGCTTCGATCCAGCTCAGAAAGCAGACCAGCGGGACTGTGTAGAGTTTACCTTGCCGCCATCTGGGATGCAGGACATTGTGATCGCCATGACAACGGTTGGGGGAGCTATTTGCGTGATGCTGGTCATCATCTGCTTGCTGGTGGCATACATCACAGAAAATATCATGAGCCCCACGACACAGCACACATACTCCTACCGCACTCACTCGCATCACTGATGTGACACTGAATCCAAGATGCactgttaataaataaaatggcttACATTTAACTTCCATGATGACCATATCTAATCTCACAATCATAGCCACTCACTGTCAATAATACTTATTTTTCAATCAGCCACATAATGATATAAACACGCTGTTACAACTGAATTGAAGCACAAACTACTGTGGGTACATGCCTTTCTCAACCTCTGCGAGGGTGCACTGAACCAAAAGTACTGATAACCTAATGTACATTTACTATCATACGGTAGtttactgtgttgtgtttttgtttaaggTTGTGATTGAGTCTGTCAATCTGTATGCTGGCTGCTTATACAGCAATACAATTAATGAAATTGATTGAGCTTGAGCGCATCAGAAACAGCAGTTTTTGCTAAATGTGCAGCCTGTGAAAGTGTCCAGACTTGTCCTGTCCTTGCTGTGACAATGGAAAATAAAACTTAACTGAATTACATTTTTCCACTTGACTAAACCATCAAACTAGTTTTGCTTTTGGTTCCGCATACAGTATTTGTACCATTTTGTGAAAGGCAATACAATCTGGTGTACAATCTCGAAATACCGTGCCAAACATCTTTAGTTAGAATGCCTTTATGTCCTGCTGTCAGTGAATAAAGTACCATGAGGTCATTTGTAATACTTTA

Function

NR:

description
uncharacterized protein LOC110494369

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798135.1 True 2140 mRNA 0.47 2 17449728 17452057

Neighbor

gene id symbol gene type direction distance location
LOC120557619 NA coding upstream 3735 17442651 ~ 17445993 (+)
LOC120557606 vwa1 coding upstream 13163 17426082 ~ 17436565 (+)
LOC120557631 tmem88b,LOC102785261 coding upstream 52204 17390537 ~ 17397524 (+)
nbl1 nbl1,LOC104928003 coding upstream 63954 17378179 ~ 17385774 (+)
dstyk dstyk coding upstream 165436 17258191 ~ 17284292 (+)
ssu72 ssu72 coding downstream 765 17452822 ~ 17457991 (+)
LOC120557636 NA coding downstream 6867 17458924 ~ 17462722 (+)
sdhb LOC106929635,LOC103130297,LOC107085616,LOC105927147,LOC103465156,LOC103357925 coding downstream 21256 17473313 ~ 17480092 (+)
mfap2 mfap2 coding downstream 28802 17480859 ~ 17486877 (+)
fbxo42 fbxo42 coding downstream 72958 17525015 ~ 17531451 (+)
G39434 NA non-coding upstream 53906 17351706 ~ 17395822 (+)
G39437 NA non-coding upstream 142021 17307055 ~ 17307707 (+)
G39433 NA non-coding upstream 151536 17297992 ~ 17298192 (+)
G39427 celsr2 non-coding upstream 160212 17288439 ~ 17289516 (+)
G39358 strip1 non-coding upstream 290492 17157903 ~ 17159236 (+)
G39486 NA non-coding downstream 9807 17461864 ~ 17462250 (+)
G39484 NA non-coding downstream 11481 17463538 ~ 17464778 (+)
G39489 NA non-coding downstream 14030 17466087 ~ 17466596 (+)
G39509 NA non-coding downstream 48006 17500063 ~ 17501224 (+)
G39516 NA non-coding downstream 58813 17510870 ~ 17512831 (+)
LOC120557637 minos1,LOC103357934 other upstream 72168 17371483 ~ 17377560 (+)
srsf3b srsf3,LOC104948713,LOC103465186,LOC102226051,LOC103150674 other upstream 251511 17193151 ~ 17198217 (+)
G39351 NA other upstream 329838 17112113 ~ 17119890 (+)
LOC120556687 LOC103362900,LOC104950925,LOC102306361,LOC100693144,LOC103362894 other upstream 403032 16964617 ~ 17046696 (+)
G39116 NA other upstream 906148 16517536 ~ 16543580 (+)
G39581 LOC104949003,LOC103357913 other downstream 155873 17607930 ~ 17609216 (+)
LOC120556838 NA other downstream 268384 17720441 ~ 17734011 (+)
wnk2 wnk2,LOC104946158 other downstream 452641 17904698 ~ 17930118 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other downstream 737525 18189582 ~ 18194911 (+)
LOC120557740 acy1 other downstream 763649 18215706 ~ 18226578 (+)

Expression


Co-expression Network