sdhb (LOC106929635,LOC103130297,LOC107085616,LOC105927147,LOC103465156,LOC103357925)


Basic Information

Item Value
gene id sdhb
gene name LOC106929635,LOC103130297,LOC107085616,LOC105927147,LOC103465156,LOC103357925
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 17473313 ~ 17480092 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798141.1
AGCAGTGACGCGGCCACGGAGTTGTATGCTGGGATAGCAGGCGCTGGAGGTCAGAGAAACTCCAAAATGTCGGTTGCTGGTCTCACGTCCTTGAGCCGCTGTGGTGTTTTGGCGTTCCGCTCCCCCGCAGGACTGgtgGCGGTGCGGTATGCTCAAACAGCAGCGGCTCCAGCAGCTCAACCCAGAATAAAGAAGTTCCAGGTGTACAGATGGGACCCAGACACTCCAGGAGACAAACCACGCATGCAGACCTACGACATCGACCTCAACACTTGTGGCCCAATGGTTCTTGATGCCTTGATCAAGATCAAAAATGAGATGGACTCCACTCTGACCTTCCGCCGCTCCTGCAGAGAAGGTATTTGTGGATCCTGTGCAATGAACATTAATGGAGGAAACACACTTGCCTGTCTTGACAAGATTGACACCAACATTAGCAAGCCAACTAAGATTTACCCTCTGCCACATATGTATGTGGTCAAGGACCTGGTACCTGACATGAGTAACTTCTACGCCCAGTACAAGTCTATTGAACCCTACCTGAAGAAGAAGGATGACTCAAAGGAAGGGAAAGAGCAGTACCTGCAGTCTGTGGAGGACAGACAGAAACTGGACGGGCTGTATGAATGTATCCTGTGCGCCTGCTGCAGTACCAGCTGCCCCAGCtactggtggaatggagacaaaTATCTTGGGCCTGCTGTGCTgatgcagGCATACCGCTGGATGATTGACTCGCGAGACGAGTTCACAGAGGAGCGTCTGTCCAAGCTGCAGGATCCTTTCTCCCTATATCGCTGCCACACTATCATGAACTGCACCAAGACCTGCCCCAAGGGCCTGAACCCAGGAAAAGCAATAGCTGAGATCAAGAAGATGATGGCCACATACAAAGAGAAGAAGGTGGCTTCTGTCTGAAACCTCAGTTGTCCTCTTCTCCAACTTTTCCCTCCATGATGAAGTTAAATATTGATTAAATAAAACGTTTATTATATTAGTATATTGATGCTTTTTGAGGTCGGACTGGCCAGTACACCAGTCagcttcaccaccaccaccaccacactcTGCAGACTGCAGTCAACTGTAatggtaatgtgtgtgtggctggagGACTTGGTGTTACATAAACGCACATGTACAGGATGAATGCACGAGAaagtcagtgtgtttgtgtgtgtcttacatGTACCATAACGGAGGTATTTATCTTTAACgctactgtgtgtatgtttgtgaaaTTGGGAGACATGTCGCTGCTTATTAAAGTAAAAAGGAGAAGGTTTCTTGTgtgtaaaaattttttttttagcttgctGCTTTTCAGCAAATCTGCTTCATTTAAAGACCTACATTGTATATGTTCCCTCAGATCGTCCAACATACCAGCAGCAGTCCTTTTTTTGATTTGgaaataaatagttgaaatacCTGCA

Function

NR:

description
succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like

GO:

id name namespace
GO:0006099 tricarboxylic acid cycle biological_process
GO:0009055 electron transfer activity molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0051537 2 iron, 2 sulfur cluster binding molecular_function

KEGG:

id description
K00235 SDHB, SDH2; succinate dehydrogenase (ubiquinone) iron-sulfur subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798141.1 True 1436 mRNA 0.47 8 17473313 17480092

Neighbor

gene id symbol gene type direction distance location
LOC120557636 NA coding upstream 10591 17458924 ~ 17462722 (+)
ssu72 ssu72 coding upstream 15322 17452822 ~ 17457991 (+)
fndc10 NA coding upstream 21256 17449728 ~ 17452057 (+)
LOC120557619 NA coding upstream 27320 17442651 ~ 17445993 (+)
LOC120557606 vwa1 coding upstream 36748 17426082 ~ 17436565 (+)
mfap2 mfap2 coding downstream 767 17480859 ~ 17486877 (+)
fbxo42 fbxo42 coding downstream 44923 17525015 ~ 17531451 (+)
slc25a34 slc25a34,LOC104928013 coding downstream 52973 17533065 ~ 17542138 (+)
LOC120557614 NA coding downstream 62116 17542208 ~ 17545551 (+)
fblim1 LOC104949010 coding downstream 69431 17549523 ~ 17555364 (+)
G39489 NA non-coding upstream 6717 17466087 ~ 17466596 (+)
G39484 NA non-coding upstream 8535 17463538 ~ 17464778 (+)
G39486 NA non-coding upstream 11063 17461864 ~ 17462250 (+)
G39434 NA non-coding upstream 77491 17351706 ~ 17395822 (+)
G39437 NA non-coding upstream 165606 17307055 ~ 17307707 (+)
G39509 NA non-coding downstream 19971 17500063 ~ 17501224 (+)
G39516 NA non-coding downstream 30778 17510870 ~ 17512831 (+)
G39522 NA non-coding downstream 51430 17531522 ~ 17531924 (+)
G39533 NA non-coding downstream 109618 17589710 ~ 17590985 (+)
G39579 NA non-coding downstream 125731 17605823 ~ 17606816 (+)
LOC120557637 minos1,LOC103357934 other upstream 95753 17371483 ~ 17377560 (+)
srsf3b srsf3,LOC104948713,LOC103465186,LOC102226051,LOC103150674 other upstream 275096 17193151 ~ 17198217 (+)
G39351 NA other upstream 353423 17112113 ~ 17119890 (+)
LOC120556687 LOC103362900,LOC104950925,LOC102306361,LOC100693144,LOC103362894 other upstream 426617 16964617 ~ 17046696 (+)
G39116 NA other upstream 929733 16517536 ~ 16543580 (+)
G39581 LOC104949003,LOC103357913 other downstream 127838 17607930 ~ 17609216 (+)
LOC120556838 NA other downstream 240349 17720441 ~ 17734011 (+)
wnk2 wnk2,LOC104946158 other downstream 424606 17904698 ~ 17930118 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other downstream 709490 18189582 ~ 18194911 (+)
LOC120557740 acy1 other downstream 735614 18215706 ~ 18226578 (+)

Expression


Co-expression Network