mfap2 (mfap2)


Basic Information

Item Value
gene id mfap2
gene name mfap2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 17480859 ~ 17486877 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798160.1
CATATGTGATTTGCTGTTGTATTTAGATTTTGTTTACGCATCTCAGCTCCTGCTGACATGTTGGTATTCACATAGGTCACCCGGTCACCTAGCAACAGGTGATAGCAGTGATTCGGCAACCAGCAGCAGCTACTAATACCTGGTCAGTTCATCGATACTTTTGATCCCAGCGTCGAAGGATCTGACGGGTAGCCAGTCTCGGGATATCCATGATGGCGTTGCGGGTCGGTGTTGGGACCGGGGGACGGAGGCTGGGACTGGACGGGGAGGAGACTACAGATGCGGGGTGGTACAATGTGGCGCTGCGAGGTCCTCCTGCACTCAGAGGACGCATGAGAGCTGAGGATAGCCGGAGCAAACTGAAGCAAAGTTTGGTGTTAAAGTCAGTCTACCTCCCAGAGTGACCATGAGAGTCCTCCTACTCATCTGCATGCCAGTTCTGCTGCTTGCCCAGCCTCAGTACCAGGAACCGTTTCCTTTTTTGGATGAATATGGGCCAGACTATTTTCAAGTGTCTGAAAATCCTGAATCTCTTCCTGGAACCTACCAGCAGCAGGTTCGACTCGAGCCAGTGGTCCGTCCAGAAGATTCAGAGTCTGATTTGGAGACGGAGCCCACAGAGCCTGGCCCTCTTGATTGCAGAGAGGAGCAGTATCCCTGCACCAGACTCTACTCTGTTCACAAGCCATGCAAGCAGTGCCTGAACAGCCTCTGCTTCTACAGTTTGCGACGGGTGTATGTCATCAACAAGGAGGTTTGCGTGAGGACCGTGTGTGCACATGAAGAGCTGCTCAGAGCGGACCTGTGCCGTGATCAGTTCTCTCGCTGCGGCGTTGCGGCGCAGAGCGGCCAGTGTGCATCACTAGGACCAAGCTGTGGGAAGAGCTGTGGTGGCTGCTGATTGACTACAGAGATCACCTGCCCAGATACTGCCGCTTTTTCTACCACTCACCCAcatcctctttcttcctcccaGTTTCTCCTCACTTTGCCTTTTGACTCTTCCTGTACAACTTATTACTCCTGTGCGAaaagcattttgtgtgtgtgtttatctttgtCTTTTCACATGTATGTTTGCCCAGTAGATCctgtgtgtatggatgaatatCCTCCAAAGAACATTGATGATTGTATTAAATCACTGGTGCTATAAAATCATCACACTGGTGCTATAAAAACTATTAGAGATGCACATAAAACTGTGGAACATCttcaattgtttttgtttttggcatACTGTACCATATTAATCTCATGCTTTGTTGATATGTTACTGTACTTGTGTTGAAAAGCAGCCATTCTCATGATAATCAACTCATCAATGGTGGCCACTGTGCACTGACATCAGACAAAACTAATCAATATCGAGCCATGCTAGATCATGAGATGTGTGAAGAAACAGGTGGTGAGTGACCTCAGTTCATGTACTACTGCCACCTGGATCTGTGCTTAGCAACCAAGCAGCAagcttatataaatatattccaGTGGCAACAAGTGCTTTAAAAAGGCATCTCACAAACAGCCTCTACTACTGCTTTGTAAAACTGTCACTATAaagactgagaaaaaaaaataaacttttttttactaca

Function

symbol description
mfap2 Acts upstream of or within blood vessel development and embryonic eye morphogenesis. Predicted to be located in extracellular region and microfibril. Is expressed in several structures, including mesoderm; notochord; postcranial axial skeleton; trunk mesenchyme; and vasculature. Orthologous to human MFAP2 (microfibril associated protein 2).

NR:

description
microfibrillar-associated protein 2-like isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798160.1 True 1598 mRNA 0.47 9 17480859 17486877

Neighbor

gene id symbol gene type direction distance location
sdhb LOC106929635,LOC103130297,LOC107085616,LOC105927147,LOC103465156,LOC103357925 coding upstream 767 17473313 ~ 17480092 (+)
LOC120557636 NA coding upstream 18137 17458924 ~ 17462722 (+)
ssu72 ssu72 coding upstream 22868 17452822 ~ 17457991 (+)
fndc10 NA coding upstream 28802 17449728 ~ 17452057 (+)
LOC120557619 NA coding upstream 34866 17442651 ~ 17445993 (+)
fbxo42 fbxo42 coding downstream 38138 17525015 ~ 17531451 (+)
slc25a34 slc25a34,LOC104928013 coding downstream 46188 17533065 ~ 17542138 (+)
LOC120557614 NA coding downstream 55331 17542208 ~ 17545551 (+)
fblim1 LOC104949010 coding downstream 62646 17549523 ~ 17555364 (+)
si:ch1073-335m2.2 LOC104949008,LOC103357917 coding downstream 71043 17557920 ~ 17578916 (+)
G39489 NA non-coding upstream 14263 17466087 ~ 17466596 (+)
G39484 NA non-coding upstream 16081 17463538 ~ 17464778 (+)
G39486 NA non-coding upstream 18609 17461864 ~ 17462250 (+)
G39434 NA non-coding upstream 85037 17351706 ~ 17395822 (+)
G39437 NA non-coding upstream 173152 17307055 ~ 17307707 (+)
G39509 NA non-coding downstream 13186 17500063 ~ 17501224 (+)
G39516 NA non-coding downstream 23993 17510870 ~ 17512831 (+)
G39522 NA non-coding downstream 44645 17531522 ~ 17531924 (+)
G39533 NA non-coding downstream 102833 17589710 ~ 17590985 (+)
G39579 NA non-coding downstream 118946 17605823 ~ 17606816 (+)
LOC120557637 minos1,LOC103357934 other upstream 103299 17371483 ~ 17377560 (+)
srsf3b srsf3,LOC104948713,LOC103465186,LOC102226051,LOC103150674 other upstream 282642 17193151 ~ 17198217 (+)
G39351 NA other upstream 360969 17112113 ~ 17119890 (+)
LOC120556687 LOC103362900,LOC104950925,LOC102306361,LOC100693144,LOC103362894 other upstream 434163 16964617 ~ 17046696 (+)
G39116 NA other upstream 937279 16517536 ~ 16543580 (+)
G39581 LOC104949003,LOC103357913 other downstream 121053 17607930 ~ 17609216 (+)
LOC120556838 NA other downstream 233564 17720441 ~ 17734011 (+)
wnk2 wnk2,LOC104946158 other downstream 417821 17904698 ~ 17930118 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other downstream 702705 18189582 ~ 18194911 (+)
LOC120557740 acy1 other downstream 728829 18215706 ~ 18226578 (+)

Expression


Co-expression Network