LOC120557636


Basic Information

Item Value
gene id LOC120557636
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 17458924 ~ 17462722 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798164.1
TCTGAACAAACTGATTAACGACGTTACCCAAGCAACcgtcagtttaaaagaaaatgacTAACGTTAAGTTGGAATTGAAATAGTTCTTGTGATCTGCTAACACGTTGCGGTAGCTGATAGTTACCTTGGTAACCTATTTTGTTTATTATAAGCAAAACAACAATGATTTGTTAATACCTGACTGGGAAAATCCATCACCGACTCTTCCCCCAGTGGTGTGGGATAGCTGAGCACGCCGGACAGAGGAGGCAGGACAGCCAGTCTCGGGGAGCCCCGTTTTCTTATCTTGGATCGAAagcactagctagctaacgAAATGAACGCGCTTTTTGGCCGCTTTCACAACTTCATCCTCCCGTTAGTGCGAGGGGCGGACGGTGTCTGCGCATGCACCTGTGGAAGGCGTCAAGTCTATCATGTTATTTCATATAATGGGGCCCAGTCCATGATGGATTCCATAGAAAACTACGTTGTAAGTGACATCATGGCCCGGCAGGAGATTAATCTGATAGTTGGACTGCTCTTGGGCCTCTGCATCAGTTTGTTCTTGCAGTGGCTGCTCGGAGTTTGCCACTCACAGCTCAAATACTGGATTTCAAACCAAATGAAAGATGTGGATTTCTGGTCATGGATGCCCAAATTAAGTAACACAAGGGAGTTGTTCAGGCAGTTACATCCAAAACACACAGAGGACTCCGGGGGGGAACATGTTGCATCTTGAGCAAGATGTGCACCATGATGTTAATGACCCATCAAGATAAAAATGTGGATTCAATTCA
>XM_039798165.1
AGCTAACTACTATGAATGGTGTGGGATAGCTGAGCACGCCGGACAGAGGAGGCAGGACAGCCAGTCTCGGGGAGCCCCGTTTTCTTATCTTGGATCGAAagcactagctagctaacgAAATGAACGCGCTTTTTGGCCGCTTTCACAACTTCATCCTCCCGTTAGTGCGAGGGGCGGACGGTGTCTGCGCATGCACCTGTGGAAGGCGTCAAGTCTATCATGTTATTTCATATAATGGGGCCCAGTCCATGATGGATTCCATAGAAAACTACGTTGTAAGTGACATCATGGCCCGGCAGGAGATTAATCTGATAGTTGGACTGCTCTTGGGCCTCTGCATCAGTTTGTTCTTGCAGTGGCTGCTCGGAGTTTGCCACTCACAGCTCAAATACTGGATTTCAAACCAAATGAAAGATGTGGATTTCTGGTCATGGATGCCCAAATTAAGTAACACAAGGGAGTTGTTCAGGCAGTTACATCCAAAACACACAGAGGACTCCGGGGGGGAACATGTTGCATCTTGAGCAAGATGTGCACCATGATGTTAATGACCCATCAAGATAAAAATGTGGATTCAATTCA

Function

GO:

id name namespace
GO:0022412 cellular process involved in reproduction in multicellular organism biological_process
GO:0019538 protein metabolic process biological_process
GO:0007281 germ cell development biological_process
GO:0006508 proteolysis biological_process
GO:0003006 developmental process involved in reproduction biological_process

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko05164 Influenza A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798164.1 True 779 mRNA 0.45 4 17458977 17462722
XM_039798165.1 False 582 mRNA 0.48 5 17458924 17462722

Neighbor

gene id symbol gene type direction distance location
ssu72 ssu72 coding upstream 933 17452822 ~ 17457991 (+)
fndc10 NA coding upstream 6867 17449728 ~ 17452057 (+)
LOC120557619 NA coding upstream 12931 17442651 ~ 17445993 (+)
LOC120557606 vwa1 coding upstream 22359 17426082 ~ 17436565 (+)
LOC120557631 tmem88b,LOC102785261 coding upstream 61400 17390537 ~ 17397524 (+)
sdhb LOC106929635,LOC103130297,LOC107085616,LOC105927147,LOC103465156,LOC103357925 coding downstream 10591 17473313 ~ 17480092 (+)
mfap2 mfap2 coding downstream 18137 17480859 ~ 17486877 (+)
fbxo42 fbxo42 coding downstream 62293 17525015 ~ 17531451 (+)
slc25a34 slc25a34,LOC104928013 coding downstream 70343 17533065 ~ 17542138 (+)
LOC120557614 NA coding downstream 79486 17542208 ~ 17545551 (+)
G39434 NA non-coding upstream 63102 17351706 ~ 17395822 (+)
G39437 NA non-coding upstream 151217 17307055 ~ 17307707 (+)
G39433 NA non-coding upstream 160732 17297992 ~ 17298192 (+)
G39427 celsr2 non-coding upstream 169408 17288439 ~ 17289516 (+)
G39358 strip1 non-coding upstream 299688 17157903 ~ 17159236 (+)
G39484 NA non-coding downstream 816 17463538 ~ 17464778 (+)
G39489 NA non-coding downstream 3365 17466087 ~ 17466596 (+)
G39509 NA non-coding downstream 37341 17500063 ~ 17501224 (+)
G39516 NA non-coding downstream 48148 17510870 ~ 17512831 (+)
G39522 NA non-coding downstream 68800 17531522 ~ 17531924 (+)
LOC120557637 minos1,LOC103357934 other upstream 81364 17371483 ~ 17377560 (+)
srsf3b srsf3,LOC104948713,LOC103465186,LOC102226051,LOC103150674 other upstream 260707 17193151 ~ 17198217 (+)
G39351 NA other upstream 339034 17112113 ~ 17119890 (+)
LOC120556687 LOC103362900,LOC104950925,LOC102306361,LOC100693144,LOC103362894 other upstream 412228 16964617 ~ 17046696 (+)
G39116 NA other upstream 915344 16517536 ~ 16543580 (+)
G39581 LOC104949003,LOC103357913 other downstream 145208 17607930 ~ 17609216 (+)
LOC120556838 NA other downstream 257719 17720441 ~ 17734011 (+)
wnk2 wnk2,LOC104946158 other downstream 441976 17904698 ~ 17930118 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other downstream 726860 18189582 ~ 18194911 (+)
LOC120557740 acy1 other downstream 752984 18215706 ~ 18226578 (+)

Expression


Co-expression Network