LOC120557646 (LOC103371188,LOC100695319,LOC106525027,LOC101482544)


Basic Information

Item Value
gene id LOC120557646
gene name LOC103371188,LOC100695319,LOC106525027,LOC101482544
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 38366059 ~ 38409274 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798178.1
TTCAAACTGGATGTCACAAGCGACTGCCGAGCGGTTTGTCAAACCGGTCCAAAGTTGTCGAGACACGGTGAGGAGGATGAACTCAAAGACGAGGATACTGCAGCTGTGTGAAGTGTGTACGCTGTGTGAACCTCGTGTGACAAAATGATAAAGAGACGCTATGCTTTCAGCGGCTAACGGAACGCTGCTTTAACACAGGGACGGGCTAGCTGCTCCTAGCCACTTAGCATCGTCAGTTAGCATCGAGTGTCAGTTTTAAACGAGTCGAGTTGTGACTTCAGATACGACTCAAGAGGACTCTTTGTGAGGGTCCAGAAGGGGACAATATGGAGAACAAGGACAAAGTACAGATGAGGAACCACCCTCGCAGACAGTTGAAGAAGCTGAGCGAGGACAGCCTCACCAAGCAGCCGGAGGAAGTCTTTGACGTCCTGGAGAAGCTGGGCGAAGGGTCGTACGGCTGTGTGTTTAAAGCCCATTATAAAGAGACGGGCGAGATCGTAGCCATCAAACAAGTTCCCGTGGAATCTGATCTTCAGGAGATCATCAAGGAAATCTCCATCATGCAGCAGTGTAACAGTCCTCACGTTGTGCGCTACTACGGCAGctacttcaaaaacagtgacctGTGGATCGTTATGGAATATTGTGGAGCCGGATCAGTTTCTGACATCATCCGAATACGCAACAAGACGataaCAGAAGAGGAGATCGCCACCATCCTGCAGTCCACTCTGAAGGGTCTGGAGTATCTTCACTTCATGAGGAAAATCCACAGAGACATTAAAGCAGGAAACATCCTGCTGAACTCCGAGGGCCAGGCCAAACTGGCCGACTTTGGAGTTGCTGGGCAACTCACAgACACCATGGCGAAGAGAAACACGGTCATCGGCACGCCGTTCTGGATGGCTCCAGAGGTCATACAGGAGATTGGGTACAACTGCGTGGCTGACATCTGGTCCCTGGGAATAACGGCTATCGAGATGGCCGAGGGGAAGCCGCCCTACGCCGACATACATCCCATGAGGGCCATCTTCATGATTCCAACCAACCCTCCGCCAACGTTCAAGAACCCAGACCTGTGGTCTCCGTCGTTTCGAGATTTTGTCAGCCAGTGTTTGGTGAAAAACCCCGAAAACAGGGCGACGGCCACACAGCTGTTACAGCATCCGTTCATCAAGTCGGCCAAGCCCAACTCCGTCCTCCGAGCGATGATCACCGACGCCATGGAGATCAAACTGAAGAGCCAGGAGGAGGAACAGAGGGAGCAGGACGCAGAAGACGACGACAACTCGgATGAGGATGAGGTGGACCAGGGGACGATGGTGCGGGCGGGAGCGGGCGACTCGGGAACCGTCAGGGCCGCCGGCTCCTTAGCCGGTTCACTCGGCGGCACAGCTCGGACGATGATCTCACACGAGGACACGGGAACCATGCAGTCGCAGCTCGGCACCATGGTCATCAACTCGGAGGACGAGGACGAGGAAGAAGCTGGAACTATGAAAAGGAGAGACGAGACGATGCAGCCAGCCAAGCCGTCCTTCCTCGAGTACTTTGagcagaaagagaaggaggcCAACAGTCACAATGACGGAGGAGGACAAAACAACGCAGATAACCGCAAACTGCCCGGTGAAGGAGACTTTGAAGTGGTGAACTCGTGGTCGGTGGAGGAGCTGCGACTGCGCCTGGCGTCTCTGGACCCCCAGATGGAGCAGGAGATCGAGGAGATCCGCCAGCGCTACCAGACCAAGAGGCAGCCCATCCTCGACGCCATTGAAGCCAAAAAACGCCGGCAGCAGAACTTCTGAGAAAAGGAACTGCCGAGCGGAACGActggatgtttatttttatttttttttattatatctcTTTGTGTTCTCTGCAGCAGTTTGGTGAAATGTCAGCAAGACAGCCGAGGTTTCACAAAAACTCCATTGCTGAGGTTCGTCCAAAATAACTGCTCACAAAGACGCCGAGATCTGGAAAAACTGTGCGGAGACTTCTGATGATCAAACTGCTGAAGAAGAACTTCCAAAGAGCCGTTTGACAGAATATGAATGACGTTTATTTTGTCTATTTGAGTCGAGATCCACGTTCTCTTTATTCTGTCCGATTGAGAGTCTTCAagaactttttttgttttccggattaacagtttaaaaaaacgccGATCtggataaaaaacaaaacggcaTTTGAGAAAGTTTGATTTGGACACCATCAGCGGCCGATCTGGACTTTCTTTCGGTTTATTTCAGGGTTGTTACACAGCGAAGATGGAATTGGATCTCTTTAAGTGTTGTATTTTACCTTATCGTGTGGTACAATATCATTTTAACCGCTGCCTGCTCAGCTTAGGTACTCGTCTATTAACTCCTCAAGTGTTTCCTGTCGTCGTTGGTCAACGATGATGCTGCTTTCAGTGTTCCCGCTGTGCACCGTGAAAAGTCTCAGAAGTCTGTTCTAGAAATGGATCGTTCTCTCGTCCTGAAAATGGCCCAGGACATGTTGGCTTCTTCTGTGAAAATCAAAGTTTCGggatcttttaaaaaaacaaagtactTGTTTGCCATCCCCCGTATTGGATTAGCTAAAAGGAGAGCATCATCATTTGGCCTGTGAGGGTGCTAAACGTCCAGAAGGTTCCTCACTCTAAACTTAAAAACAGCTTTCCCTTTTAAACTTGAtaacaaaactaactttctttcccatgtttttttcttttcttttttctacatacagcgttaaaggtgcagtaggtaagacatataaaactaactttctgtcatatttgctga

Function

NR:

description
PREDICTED: serine/threonine-protein kinase 3/4-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0007165 signal transduction biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K04411 STK4, MST1; serine/threonine kinase 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798178.1 True 2801 mRNA 0.49 11 38366059 38409274

Neighbor

gene id symbol gene type direction distance location
LOC120557037 LOC105888650,LOC105896821,LOC103395674,LOC101068541,LOC105891059 coding upstream 18816 38346807 ~ 38347243 (+)
LOC120557028 NA coding upstream 21808 38342443 ~ 38344251 (+)
LOC120557038 si:ch1073-153i20.5,LOC103462478,LOC107386469,LOC103381127,LOC103395676,LOC102204254,LOC101485372 coding upstream 40069 38325543 ~ 38325990 (+)
LOC120557035 LOC103395674,LOC101167724,LOC101068541,LOC105888650,LOC101170117 coding upstream 53572 38311854 ~ 38312487 (+)
LOC120557029 NA coding upstream 57075 38306826 ~ 38308984 (+)
rbpjl rbpjl,LOC100707106 coding downstream 324893 38734167 ~ 38784058 (+)
LOC120557663 NA coding downstream 447893 38857167 ~ 38886428 (+)
LOC120557676 NA coding downstream 488086 38897360 ~ 38913530 (+)
LOC120557116 NA coding downstream 532298 38941572 ~ 38942817 (+)
LOC120557678 NA coding downstream 536133 38945407 ~ 38947850 (+)
G44387 LOC104935308,LOC107719244,LOC104932967 non-coding upstream 34009 38331380 ~ 38332050 (+)
LOC120557055 NA non-coding upstream 117739 38247303 ~ 38248320 (+)
LOC120557056 samd3,LOC101476819 non-coding upstream 137709 38227579 ~ 38228350 (+)
G44325 LOC104935308,LOC104932967 non-coding upstream 205365 38159937 ~ 38160694 (+)
G44265 NA non-coding upstream 416282 37949515 ~ 37949777 (+)
G44402 NA non-coding downstream 728 38410002 ~ 38412477 (+)
G44401 NA non-coding downstream 3553 38412827 ~ 38413939 (+)
G44417 NA non-coding downstream 46648 38455922 ~ 38456336 (+)
G44419 NA non-coding downstream 47407 38456681 ~ 38457162 (+)
G44424 NA non-coding downstream 97794 38507068 ~ 38507690 (+)
LOC120557027 NA other upstream 191565 38166182 ~ 38174494 (+)
plekha6 plekha6 other upstream 269987 37960706 ~ 38096072 (+)
fezf2 fezf2 other upstream 1654764 36703255 ~ 36711295 (+)
trnac-gca_18 NA other upstream 2403449 35962539 ~ 35962610 (+)
G43924 NA other upstream 2700018 35664143 ~ 35666041 (+)
G44436 NA other downstream 203363 38612637 ~ 38612971 (+)
LOC120557667 LOC102775714,LOC103375741 other downstream 491298 38900572 ~ 38903056 (+)
LOC120557670 NA other downstream 543844 38953118 ~ 38981733 (+)
LOC120557680 NA other downstream 1337899 39747173 ~ 39774250 (+)
G44581 NA other downstream 1404686 39813960 ~ 39821908 (+)

Expression


Co-expression Network