LOC120557663


Basic Information

Item Value
gene id LOC120557663
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 38857167 ~ 38886428 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798209.1
TACAGTAACTGATCCAACGATTCAATGGACAACTATGGAGCTTCTTCTGGatctgctgtgtttgtgtcttctgTGTTTGACCCGAAAAACACTTTGTGATGAAAACAGACCGAAAAACATCACAGTGGAAGGAGGAGCTGATGTAATGTTACCCTGTTCTCTCAGCACCAAGGAGAACACTGAGTTTAAACTCTTTGACTGGAGGAAAGTTGCTCAGAAAGATGATGGTCAGAAGGAGGTGTTCATGTATGATGCAGGCATTCATTACAACAACGGTCGTCCAGGTCAGAGTGAAGAGTTCAAAGGTCgagtttttcattttcaagaTGAACTGAAACACGGCAACGCCTCCATAATCATCAGAAATACAAAGATATCTGACAGTGGAAACTACACCTGTGATTTTCCAAAACTTCAGCCACCTCAAAAATTCTACATTGAGATTGTTGTTGAGCCAAAAGTCATCACAGTGAATGAAGGGAGTGATGTTACTTTACCCTGTTCTCTCAGCACCAAGGAGAACATTACTTCAAAACTGTTTGACTGGACGAAAGTTGCTCAGAAATATGATTGTCAGAAGGATTTGTTCTTTTATAATGGAGGCAGcaataataacaaaaactgTTTTCCAGGTCGAGTCTCATATTTTCCAGATGAACTGAAACACGGCAACGCCTCCATAATCATCAGAAATACACAGGTGACTGACAGTGGAGTCTACACCTGTGATTTTCCAAATCTTCAGCCACCTCAAACATTCTATATTGAGCTTATTGTTGTCGTTGGTGCCGCTTTAAAACCATTTGTTACAATACTTGATGCAACAGCATACTCTGCGCTGCTGCAGTGTGAAGTTCATGGCAATCCCAAACCTAAAGTAGAGCTGCGGAACAGGGCTGGAAACATCCTTCATGCTAAAGTAACACAAGACTCAGAAAGAGAAGGCAGCTTCTACATCACCCTCCAAACTAAAGTGACCAAGACCGGCACCTATCGCTGTGTAGCCACACAGGAGgaaatcaaacatcagatttatgCTGAGACCTCTGTGTATATCAGTGGGTTCAGTGGATGGATTGCTGCTGCAGTTATTGgtgttctttttcttgttgCTGGTGTTATTCTAGCTGTGCTTTTATACAGGCGTAAAAAAGAGCCAAAACTCATCACAGTGGAAGAAGGCAGTGATGTTATTTTACCCTGTTCCGTCTGGCCCGAGAAGAACCTTCGGTCAACAAAGTTTGTCTGGAAGAAAACTGATGATAATGTGTTCCTGTATGATAATGGCGAGCATCCAGGTCAGAGTGAGCAGTTCAAAGGTCGAGTCTCACATTTTCCAGATGAACTGGAACAAGGCAACGCCTCCATAATCATCAGCAATACAACGAGGGCTGACAGTGGAGAATACAGATGTATTATTCCACTAATtcataaacaacaaaaattccaaattaatgttgttgttgGGACAGAAGTCATCAAAGTGGAAGAAGGCAGTGATGTTACTTTACCCTGTTCCCTCTGGCCCAAGGAGGACATTCGGTTAACACAGTTTAACTGGAAGAAAATGCCTCAGAATGATGAAAGTCAGATGGAGGTGTTCCTGTATGATAAAGAGCCAAAACTCATCACAGTGGAAGAAGGCAGTGATGTTACTTTACCCTGTTCTCTCTGGCCCAAGGAGGACATTCGGTCAACACGGTTTGTCTGGCGTAAAAATTATGATGGTCAGATGGTGTTCCTGTATGATAAAGATGATCTTTACAGTGACGAGCGTCCAAGTTGCAAGTTCCAAGGTCGAGTCTCACATTTTCCAGATAAACTGGAACAAGGCAACGCCTCCATAATCATCAGAAATACGACGAGGGCTGACAGTGGAGACTACAGATGTAGTTTTCCAAAAATTCGGAAACCTAAAAAATTCCACATTAAGCTTATTGTTGGGCCAAAAGTCATCAAAGTGGAAGAAGGCGGTGATGTTATTTTACCCTGTTCCCTCTGGCCCAAGAAGGATCTTCGGTCAACACAGTTTATCTGGAAGAAAGTTTCCGAGAAAACTGATGATGGTCAGAAGGTGTTCCTGTATGATAAAGGTGATCTTTACAGTGACGAGCATCCAGGTCAGAGTGAGCAGTTCAAAGGTCGAGTCTCACTTTTTCCAGATAAACTGAAACAAGGCAACGCCTCCATAATCATCAGAAATGCAATGAGGGCTGACAGTGGAGACTACAGATGTTATTTTCCATCAATTCAAAGACCTCAAATGTTCTACATTAAGCTTGATGTTGAGCCAACAGTCATCACAGCGGAAGAAGGCAGTGATGTTACTTTACCCTGTTCCCTCTGGCCCAAGGAGGACATTCAGTTAACACGGTTTATCTGGAAGAAAGTTTCCCAGAAAACCGATGATGTTCAGAATGTGTTCCTGTATGATAAAGGTGATCTTTACAGTGACGAGCGTCCAGATCAAAGTGAGCAGTTCAAAGGTCGAGTCTCACATTTTCCAGATGAACTGAAACAAGGCAACGCCTCCATAATCATCAGAAATACGACGAGGGCTGACAGTGGAGACTACATCTGTATTGTTCCATCAATTCAGAAACCTAAAACAATCCACATTAAGCTTGTTGTTGctTCAACTCCAGAGTCAGATGAACATCATCCATTAATGAATGGAATGGATGGAATCGAACTTCATTCATTAATGATAGAAAGGCTTTGATAATGTCTGTGTTGCTGGAAACATTTCTttagttttcagttattttatgCTTGTGTTATATCACAATTAATAGGCTCATTGATTTTGTCGTGCAGTTCTAGTTGATTGTGTAACTGTTTGTAAGACTTGTACAGTATTCCTGTTCCAGAGGTGTGTAGAGCAGAGAGGACCAGGTCAACATGATGATGCTCTTATAAGTcttgtatttttatattcagACCAAATTACAAAGTTAACTGTGATGATGTGGAGTGTGAAATATTGTGCAaataaatgtcattttatttattttttaaatatattttaccattttatattgtattttgttACATGTCTTTGCTCTTCAGACAACCATTGGTTGCTTCTGTATTTAAAAGAATGGTTAAAGGGCAACtcttatatagcattttcaggttcatacttgtattttgcgTTTGTACTTGTATCACTATATGAAGCTTGAGCTACTGCAacggagtatatagcaggactttgaTTATTTAAATCACCAACagaggcttctaaaccaaatgttacacaaccggttggaaatctgaaccttttagctcacagggattttGTTTAAAGTATGTTTCTCATTATTTGATgttttggccacgtttaacatgaaaatcctaCATTATAACATCATatatgtgacaaaaaacatgaaaatgaatAATATGTCCTTTTTTAAGGCTTATatgtggtattgatcttcttatctaactcaGTGAGAAAGTGAATAAAGTGCCCTGGGGGGTCACCGGGTAGAGCCGGTACTTTAGGCCGAGTCATCACCACGGTGACTTTGGTTTGGTCCGTCAcagggccctttgctgcatgtcataccctctctctcctctgtatcTTTTAAAAcgagaaatgcccaaaaatgtatcctaaaaaaaacccaaaatgattaactgtaatgtatttttacttttatatgaCAAGACAAAGTCTGTACCGTACATCTTACTGTGTTCTTGCACTTGTTTGTTGTTAAGCGATAATATAGTGCCTGTATGTAATTTCaatttaaatgtattcaaaCTTTACTATTGAAAATCTTGAATTAAAAGTCAATATTGATATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798209.1 True 3822 mRNA 0.40 11 38857167 38886428

Neighbor

gene id symbol gene type direction distance location
rbpjl rbpjl,LOC100707106 coding upstream 73109 38734167 ~ 38784058 (+)
LOC120557646 LOC103371188,LOC100695319,LOC106525027,LOC101482544 coding upstream 447893 38366059 ~ 38409274 (+)
LOC120557037 LOC105888650,LOC105896821,LOC103395674,LOC101068541,LOC105891059 coding upstream 509924 38346807 ~ 38347243 (+)
LOC120557028 NA coding upstream 512916 38342443 ~ 38344251 (+)
LOC120557038 si:ch1073-153i20.5,LOC103462478,LOC107386469,LOC103381127,LOC103395676,LOC102204254,LOC101485372 coding upstream 531177 38325543 ~ 38325990 (+)
LOC120557676 NA coding downstream 10932 38897360 ~ 38913530 (+)
LOC120557116 NA coding downstream 55144 38941572 ~ 38942817 (+)
LOC120557678 NA coding downstream 58979 38945407 ~ 38947850 (+)
LOC120557683 NA coding downstream 236360 39122788 ~ 39142350 (+)
LOC120557665 NA coding downstream 362738 39249166 ~ 39276979 (+)
G44489 NA non-coding upstream 15934 38841034 ~ 38841233 (+)
G44488 NA non-coding upstream 32148 38824675 ~ 38825019 (+)
LOC120557691 NA non-coding upstream 43723 38806446 ~ 38813444 (+)
G44454 NA non-coding upstream 143344 38709982 ~ 38713823 (+)
G44451 NA non-coding upstream 173706 38683161 ~ 38683461 (+)
G44499 NA non-coding downstream 101640 38988068 ~ 38988533 (+)
LOC120557696 NA non-coding downstream 213557 39099985 ~ 39100496 (+)
LOC120557694 NA non-coding downstream 317241 39203669 ~ 39205218 (+)
G44527 NA non-coding downstream 612671 39499099 ~ 39865513 (+)
LOC120557693 NA non-coding downstream 722293 39608721 ~ 39610204 (+)
G44436 NA other upstream 244196 38612637 ~ 38612971 (+)
LOC120557027 NA other upstream 682673 38166182 ~ 38174494 (+)
plekha6 plekha6 other upstream 761095 37960706 ~ 38096072 (+)
fezf2 fezf2 other upstream 2145872 36703255 ~ 36711295 (+)
trnac-gca_18 NA other upstream 2894557 35962539 ~ 35962610 (+)
LOC120557667 LOC102775714,LOC103375741 other downstream 14144 38900572 ~ 38903056 (+)
LOC120557670 NA other downstream 66690 38953118 ~ 38981733 (+)
LOC120557680 NA other downstream 860745 39747173 ~ 39774250 (+)
G44581 NA other downstream 927532 39813960 ~ 39821908 (+)
LOC120557666 NA other downstream 1269780 40156208 ~ 40431341 (+)

Expression


Co-expression Network