LOC120557665


Basic Information

Item Value
gene id LOC120557665
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 39249166 ~ 39276979 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798211.1
CCGGCCTGCGTCTGGTTCTTACCTTACAGATAAACAGGAATTGTAGTGGCCGTGTAGCGACAGATCAGCTTTCTTCTACCAGGTGTTGTACACAtacaaagagtgtgtgtgtgtgtgtgtgtgcgtgtgtaaacAGTGCCGAGTGTTCAACGTATTGCAGTGAGATTGCTCTTTTATTTTGGAGGAGACCCCCTGAACACCCCCTAAGGACCTTTTGGTGTCCCTGGACCCCAGTTTAAGAACTTCAGCTTCAAGCTACACTGCTGCAGAcgcttgttgttgtttattagGGTAACTGATCCAACGATTCAATGGACAACTATGGAGCTTCTTCTGGatctgctgtgtttgtgtcttctgTGTTTGACCGGAAAAACACTTTGTGATGAAAACGGGCCAGAAGTCATCAAAGTGGAAGAAGGGGCTGATGTAATGTTACCCTGCTCTCTCAGCACCAAGGAGAACATTGAGTTTAAATTCTTTGACTGGAGGAAAGTTGCTCGGACAGATGGTCTGAAGGAGGTGTTCCTGTATGACGCAGGCATTCATTACAACAACGGTCtagatggtcagagtgaagagTTCAAAGGTCGAGTCTCTCATTTTCAAGATGAACTGAAACACGGCAACGCCTCCATAATCATCAGAAATACACAGGTGACTGACAGTGGAGTCTACACCTGTGATTTTCCAAATTTTCAGCCACCTCAAACATTCTATATTGagcttgttgttgttgGTGCAGCTTTAAAACCATTTGTTACAATACTTGATGCAACAGCATACTCGGCGAAGCTGCAGTGTGAAGTTCATGGCAATCCAAAACCTAAAGTAGAGCTGCAGGACAGTGATGGAAACATCCTTCATGCTAAAGTAACACAGGACTCAGAAAGAGAAGGCAGCTTCTACATCACCCTCCAAACTACTGTGACCAAGACCGGCACCTATCGCTGTGTAGCCACACAGGAGGAAATCAGACATCAGATTTATGCTGAGATCTCTGTGTATATCAGTGGGTTCTCCACTGGATGGATTGCTGCTACAGTTATTGgtgttctttttcttgttgCTGGTGTTATTCTAGCTGTGCTTTTATACAGGCGTAAAAAAGAGCCAAAACGCATCAAAGTGGAAGAAGGCGATGATGTTACTTTACCCTGTTCCCTCTGGCCCATGGACATTACGTCAAAACAGTTCGTCTGGCAGAAAACTGATGATGGTCAGAAGGTGTTCCTGTATGATAATGGCGATCTTTACAGTGACGAGCTTCCAGATCAGAGTGAACAGTTCAAAGGTCGAGTCTCATATTTTGAAGATGAACTGGAACAAGGCAACGCCTCCATAACCATCAGAAATACGACGAGGGCTGACAGTGGAGAATACAGATGTAGTTTTCAGAAACATCAAACTTTCTGCATTAAGCTTGATGTTGTTGgGCCAGAAGTTATCAAAGTGGAAGAAGGCAGTGATGTTACTTTACCCTGTTCACTCTTGCACAAGGACATTTGGTTAACACAGTTTAACTGGAAGAAAATGTCTCAGAATGATGAAAGTCAGATGGAGGTGTTCCTGTATGATAATGGTGATCTTTACAGTGACGAGCGTCCAGGTCAGAGTGAGCAGTTCAAAGGTCGAGTCTCACATTTTCAGGATGAACTGAAACAAGGCAACGCCTCCATAACCATCAGAAATACGACGAGGGCTGACAGTGGACATTACAGATGTAAATTTCCATTCATTCAGAAACCTCAAATATTCTACATTAAGCTTGATGTTGTTGCTTCAACTCCAGAGCCAAATGAACTTCATCCATTAATGAATGGAATGGATGGAATCGAACTTCATTCATTAATGATAGAAAGGCTTTGATAATGTCTGTGTTGCTGGAAACATTTCTttagttttcagttatttcatgcTTGTCTTATATCACAATGAATAGGCTCATTGATTTAGTCTTGCAGTTCTAGTTGATTGTGTAACTGTTTGTAAGACTTGTACAGTATTCCTGTTTCAGAGGTGTGTAGAGCAGAGAGGACCAGATCAACATGATGATGCTCTTATAAGTCTTGTCTTCTTGTATTCACACCAAATTACAAAGTTTGCTGCGATGATGTGGAGTGTGAAATATTGTGCAAAAAAagctcattttatttattgtttaaatattgtttaccattttatattgtgttttattacatttctttgCTCTTCAGATAATCATTGGTTGCTTCTGTATTTGAAAGAATGGTTAAAGGGCAACTCTTATAtagtattttcaggttcatacttgtattttgcaTTTGTACTTGTATCACTAGTTGAAGCTTGAgctactgtaacagagtatatagcaggactttgtactgTGAAATATCACCAACagaggcttctaaaccaaatgttacacaactgattggaaatctgaacgttttagctcacagggatttctctaaaatatgtttctcattatttgaagttttggccacgtttaacatgaaaatcctaCATTATAACATCGTatatgtgacaaaaaacatgaaaatgaatAATATGTCCTTTTTCAGGCAGAGATGTGGTATtaatcttcttatctaactcaGTGAGAAAGTGAATAAAGTGCCCTGGGGGGTCACCGGGTAGAGCCGGTACTTTAGGCCGAGTCATCACCACGGTGACTTTGGTTTGGTCCGCCAcagggccctttgctgcatgtcataccctctctctcctgtgtatTTTTCAaagcagaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798211.1 True 2753 mRNA 0.41 10 39249166 39276979

Neighbor

gene id symbol gene type direction distance location
LOC120557683 NA coding upstream 106816 39122788 ~ 39142350 (+)
LOC120557678 NA coding upstream 301316 38945407 ~ 38947850 (+)
LOC120557116 NA coding upstream 306349 38941572 ~ 38942817 (+)
LOC120557676 NA coding upstream 335636 38897360 ~ 38913530 (+)
LOC120557663 NA coding upstream 362738 38857167 ~ 38886428 (+)
LOC120557118 NA coding downstream 17658 39294637 ~ 39313682 (+)
LOC120557124 NA coding downstream 514032 39791011 ~ 40446646 (+)
LOC120557127 NA coding downstream 1277971 40554950 ~ 40583705 (+)
LOC120557675 LOC107573218 coding downstream 1368209 40645188 ~ 40647514 (+)
LOC120557684 NA coding downstream 1407843 40684822 ~ 40716121 (+)
LOC120557694 NA non-coding upstream 43948 39203669 ~ 39205218 (+)
LOC120557696 NA non-coding upstream 148670 39099985 ~ 39100496 (+)
G44499 NA non-coding upstream 260633 38988068 ~ 38988533 (+)
G44489 NA non-coding upstream 407933 38841034 ~ 38841233 (+)
G44488 NA non-coding upstream 424147 38824675 ~ 38825019 (+)
G44527 NA non-coding downstream 222120 39499099 ~ 39865513 (+)
LOC120557693 NA non-coding downstream 331742 39608721 ~ 39610204 (+)
LOC120557690 NA non-coding downstream 367776 39644755 ~ 39646601 (+)
LOC120557689 NA non-coding downstream 376299 39653278 ~ 39655738 (+)
LOC120557695 NA non-coding downstream 464008 39740987 ~ 39743350 (+)
LOC120557670 NA other upstream 267433 38953118 ~ 38981733 (+)
LOC120557667 LOC102775714,LOC103375741 other upstream 346110 38900572 ~ 38903056 (+)
G44436 NA other upstream 636195 38612637 ~ 38612971 (+)
LOC120557027 NA other upstream 1074672 38166182 ~ 38174494 (+)
plekha6 plekha6 other upstream 1153094 37960706 ~ 38096072 (+)
LOC120557680 NA other downstream 470194 39747173 ~ 39774250 (+)
G44581 NA other downstream 536981 39813960 ~ 39821908 (+)
LOC120557666 NA other downstream 879229 40156208 ~ 40431341 (+)
G44690 NA other downstream 1203697 40480676 ~ 40506570 (+)
LOC120557692 NA other downstream 1227215 40504194 ~ 40506056 (+)

Expression


Co-expression Network