LOC120557678


Basic Information

Item Value
gene id LOC120557678
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 38945407 ~ 38947850 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798231.1
ATAACCTGATTAAACAACAACTATGGAGCTACTTCTGGatctgctgtgtttgtgtcttctgTGTTTGACCGGGAAAAGACTTTGTGATGAAAACGAACCAAAATATATCATAGTGAAAGAAGGGACAGATGTTATGTTACCATGTTCTCTCAGCACCAAGGAGAACGTTGAGTCAAAAGTGTTTGACTGGAGGAAAGTTGCTCAGAAAGATGATGGTCTGAAGGAGGTGTTCATGTATGAAAAAGGCTTTCATTACAATAACGGTCGTCCAGGTCAGAGTGAAGAGTTCAAAGGTCGAGTCTCACATTTTGAAGATGAACTGAAACACGGCAACGCCTCCATAATCATCAGAAATAAGAAGGAGGCTGACAGTGGAGTCTACACCTGTCATTTCCCACGTCTTCATCAAATGTTCCTCCTTAAGCTTGTTGTTGTTGCTCCAGAGCCAGACATCAACATTATTGATGCCACAGATGATGGAGTGTTGCTGCAGTGTGAGGTTCGAGGTGCTGTTCCCAAACCTAGAGTAGAGTGGCAGGACAGAGATGGAAACAAACTTCCTGCTGAAGACCCGCAGGTCTCTGAAAGAGGAGACAGATACCACATCACCCTCCAGACTACTGTGACCAAGACCGGCTGCTGTCGCTGTGTCGTCACACAGGAGGAAACCAACCGGAGGACTCATGCTGAGATTTATGTGGCTATTATTGGTAAGATTCCTCCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798231.1 True 727 mRNA 0.45 3 38945407 38947850

Neighbor

gene id symbol gene type direction distance location
LOC120557116 NA coding upstream 2590 38941572 ~ 38942817 (+)
LOC120557676 NA coding upstream 31877 38897360 ~ 38913530 (+)
LOC120557663 NA coding upstream 58979 38857167 ~ 38886428 (+)
rbpjl rbpjl,LOC100707106 coding upstream 161349 38734167 ~ 38784058 (+)
LOC120557646 LOC103371188,LOC100695319,LOC106525027,LOC101482544 coding upstream 536133 38366059 ~ 38409274 (+)
LOC120557683 NA coding downstream 174938 39122788 ~ 39142350 (+)
LOC120557665 NA coding downstream 301316 39249166 ~ 39276979 (+)
LOC120557118 NA coding downstream 346787 39294637 ~ 39313682 (+)
LOC120557124 NA coding downstream 843161 39791011 ~ 40446646 (+)
LOC120557127 NA coding downstream 1607100 40554950 ~ 40583705 (+)
G44489 NA non-coding upstream 104174 38841034 ~ 38841233 (+)
G44488 NA non-coding upstream 120388 38824675 ~ 38825019 (+)
LOC120557691 NA non-coding upstream 131963 38806446 ~ 38813444 (+)
G44454 NA non-coding upstream 231584 38709982 ~ 38713823 (+)
G44451 NA non-coding upstream 261946 38683161 ~ 38683461 (+)
G44499 NA non-coding downstream 40218 38988068 ~ 38988533 (+)
LOC120557696 NA non-coding downstream 152135 39099985 ~ 39100496 (+)
LOC120557694 NA non-coding downstream 255819 39203669 ~ 39205218 (+)
G44527 NA non-coding downstream 551249 39499099 ~ 39865513 (+)
LOC120557693 NA non-coding downstream 660871 39608721 ~ 39610204 (+)
LOC120557667 LOC102775714,LOC103375741 other upstream 42351 38900572 ~ 38903056 (+)
G44436 NA other upstream 332436 38612637 ~ 38612971 (+)
LOC120557027 NA other upstream 770913 38166182 ~ 38174494 (+)
plekha6 plekha6 other upstream 849335 37960706 ~ 38096072 (+)
fezf2 fezf2 other upstream 2234112 36703255 ~ 36711295 (+)
LOC120557670 NA other downstream 5268 38953118 ~ 38981733 (+)
LOC120557680 NA other downstream 799323 39747173 ~ 39774250 (+)
G44581 NA other downstream 866110 39813960 ~ 39821908 (+)
LOC120557666 NA other downstream 1208358 40156208 ~ 40431341 (+)
G44690 NA other downstream 1532826 40480676 ~ 40506570 (+)

Expression


Co-expression Network