LOC120557684


Basic Information

Item Value
gene id LOC120557684
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 40684822 ~ 40716121 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798240.1
ACACGGCAACGCCTCCATAACCATCAGAAATACAAAGGTGGCCGACAGCGGAAACTACACctgtttttttccaaatcttCGGCCAACTCAAACATTCAAGATTGAGCTTGTTGTTGATCGTGTTTTAAAAAACAGAACAGGGGAAAATATCCCAGGTGCAGCTCCAAAACCATCTGTCACAATACTTAAAACTAAGGATGGAGTGCTGCTGCAGTGTGAGGTTCATGGCACTCCAAAACCTAAAGTAGAGTGGCAGGACAGAGCTGGAAACATCCTTACTGCTGAGGAGCCCCAAGTCTCAGAGAGAGGAGGCCATTTCTACATCACTCTCACCGCTACTGTGACCATGGCTGACCATTATCGCTGTGTAGCCACTCAGGAGACAATCAGCCATCAGATTTCTGCTGAAATTTATGTGCCCCTCAATGGTGCATCTCCAGAACCATACCTCAACATACTTAAAACAAAGGATggagtgctgctgctgtgtaaaGTCCGAGGTGCTTCTCCAGAACCTGAAGTAAAGTGGGAGGACAGTGATGGAAACATGATTACTTCTGAAGAACCACAGGTCACAAAAAAAGGAGGCAGCTACGACATCATCCTCCACGCTTCTGTGACCAAAACTGACCACTATCGCTGTGTTGTCACACAGAAGACGATCAACCATTCCATTTCTGATAAGATTTATGTGCCTCTAAATGCTGGATCGCAGACACATCCTTCAGATCAAAACTTGAGGAAAGTGATGATTGGAGTTGCTGTTGTAGTTCTCGCagaatttctgtttttgtaGGTGTTCATCTAGCTCCGCCTGGAAATGACTAACGGTCTACGGTTCATTGTGAGACAAAAGTGACCCGGCCGAAAAGGAGCCAGAGCCCCAATCAACACCAACTTTAAAGTTCTCTGCAGATGTGTGTGGTATCATACTTCTTTTCTCGCGAGGACCACTTTGAATTTTAGAACAAAAGAGTGAGGACATTTTTAGAGATTGAGGACATTTTCTCTTCAACTTCTTAAAAGGTCAGTTTGAGAGTTAAGACCTAGAATTGGGCTTTGTATCGTATGTGGATAACTTTTCAAAATTCTGAGTTTTGTGACTATTGataatgttaaaaaagcaaatgtGAAAGACATAAATGTtgcacatactcacacacagtaTGTGCAACATTTCTGTGGCGGTATATTGACTTTTCACAAGATGTGGAATGAGAATTTATTGATATGTTGAGTATATATTGATATAGTGTTACATATATGACATGTTTTCTGCTCATTGAATTCCCAAAAGTCTCTGCTTTCCAGTCAGAAGTCAGTGTGcagaaatatacaaatacagtacaggccaaaagtttggacacaccttctcactcaatgtgttcctttattttcatgactatttactttgtagattatcac

Function

GO: NA

KEGG:

id description
ko04145 Phagosome
ko04670 Leukocyte transendothelial migration

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798240.1 True 1425 mRNA 0.42 7 40684822 40716121

Neighbor

gene id symbol gene type direction distance location
LOC120557675 LOC107573218 coding upstream 37308 40645188 ~ 40647514 (+)
LOC120557127 NA coding upstream 101117 40554950 ~ 40583705 (+)
LOC120557124 NA coding upstream 238176 39791011 ~ 40446646 (+)
LOC120557118 NA coding upstream 1371140 39294637 ~ 39313682 (+)
LOC120557665 NA coding upstream 1407843 39249166 ~ 39276979 (+)
LOC120557681 NA coding downstream 5575 40721696 ~ 40734477 (+)
LOC120557677 NA coding downstream 22770 40738891 ~ 40798049 (+)
LOC120556655 NA coding downstream 91107 40807228 ~ 40821097 (+)
LOC120557310 NA coding downstream 156728 40872849 ~ 40914254 (+)
LOC120557311 NA coding downstream 245587 40961708 ~ 40989920 (+)
LOC120557700 NA non-coding upstream 28176 40655859 ~ 40656646 (+)
G44634 NA non-coding upstream 57511 40443873 ~ 40627311 (+)
LOC120557699 NA non-coding upstream 75258 40601428 ~ 40609564 (+)
G44637 NA non-coding upstream 81785 40602563 ~ 40603037 (+)
G44621 NA non-coding upstream 139447 40412611 ~ 40545375 (+)
LOC120557697 NA non-coding downstream 680 40716801 ~ 40775058 (+)
G44712 NA non-coding downstream 13029 40729150 ~ 40794798 (+)
G44713 NA non-coding downstream 21155 40737276 ~ 40755203 (+)
G44632 NA non-coding downstream 22789 40738910 ~ 40783812 (+)
LOC120557698 NA non-coding downstream 43688 40759809 ~ 40772434 (+)
LOC120557687 NA other upstream 16080 40666199 ~ 40668742 (+)
LOC120557674 NA other upstream 136974 40519942 ~ 40547848 (+)
G44690 NA other upstream 178252 40480676 ~ 40506570 (+)
LOC120557692 NA other upstream 178766 40504194 ~ 40506056 (+)
LOC120557666 NA other upstream 253481 40156208 ~ 40431341 (+)
LOC120557312 NA other downstream 132694 40848815 ~ 40931383 (+)
LOC120557139 LOC106956008,LOC103153866,LOC103464266,LOC108411580,LOC102236494 other downstream 1034882 41751003 ~ 41768313 (+)
G45186 NA other downstream 1153609 41869730 ~ 41880367 (+)
dynlrb1 dynlrb1,LOC106565026 other downstream 1180874 41896995 ~ 41902631 (+)
map1lc3a map1lc3a,LOC107551126 other downstream 1189408 41905529 ~ 41912117 (+)

Expression


Co-expression Network