tpra1 (tpra1)


Basic Information

Item Value
gene id tpra1
gene name tpra1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 11855465 ~ 11862835 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798268.1
GACTTACTCTGCTTGTTTGGTGAGTGTCAGCTGACCTCACTGGGAAAATTTGTTAAGGAAACTGTACGAAACTATCCACAGCCATGTCCCGTATCGGCGATCAGTTTATTGATCGATTACAGCGTGTATGACAGCGAGTAAAGCATGTGCTGAAGACAGATTCTTTGTCAAATATTTTACATCAGCTGTTCCCTTGAATCGGAGTCTACTGAGTCGCGCCCGACACCATGCTAGCCACAGTGACTGCTGTGATTAGGTTTGCTCAATACAATGGCAGTATTTCACCTACACCATTGGAGAACACATCAACATTCCCAACTTGGCAACCTGATACTGAAGCCAACATCACCAAGCCTCACAAATGTTTGCAAGTTCTGTACGAGGACATTGGAGACTCCAGGGTACGGTTCTGGGACATTTTACTGCTCGTGCCTAATGTGGCCTTCTTTGTATTCCTGATGTGGAAGCTGCCCTCAGCCAGGGCAAAGATTCGACTCACCTCCAGCCCCATCTTCGTCACCTTTTACTTGCTGGTGTTTGTTGTAGCGGCGGTTGGAATCACCCGGGCCGTAGTGTCCATGACTGTCAGTGCGTCCAGCGCTGCCACCATCATTGACAAAGTGCTGTGGGAAATCACCCGCTTCTTCTTGCTGGCTATTGAGCTCAGTGTTGTTATCTTGGGACTGGCTTTCGGTCACCTGGAGAGCAAGTCCAGTATAAAGCGAGTGCTGGCTATCACTGCAGTGCTGGCTCTGGGCTACTCTATTACACAGGGCACGCTAGAGATCCTGTATCCAGACAGTCACCTGTCCGCTGAGGACTTTAACATCTACGGTCACGGAGGACGGCACTTCTGGTTGGCCAGCTCCTGCTTCTTCTTTCTGgtGTACTCTTTGATTGTGATCTTGCCTAAAACTCCAGTGAGGGAAAGAATATCTCTGCCATCTAAGAGGAGTTTCTATGTATATGCTGCCATCCTGTCTTTACTGAACCTCGTCCAGGGCCTGGGCAGTGCTCTGCTATGTGCTGGAATCATCGAGGGACTCTGCTGTGTGGATGTCACCACCTTCTTGTACTTCTCCACCTTTGCTCCCCTCATTTATGTCACGTTCCTCAAGGGCTTCTTTGGTTCAGAGCCCAAGATCCTGTTCTCCTACAAGTCACAGGTGGATGAGCCGGATGAAAGTGACGTCCACCTTCCCCCCACCATCGCTACGACCCTTGGCCGTAAGGAGCTGACTGACCAAGGCCTGTTTTACTCCTCCACCCAGATCGATGGCTCTGGTCCCGGCAGCTCTCGTATGGTTGGAGCATACCTGGATGATGTTGCCTCCGGACCCTATGGGTCCAGCAGCATTAACAGCACTGAAGCTGACCGCTGGAGACCTATCAACGCGTGAATGAATGGAAGAAGAGAGGTGGTTATACAGCTGGACTTAAATGTTGTGCGTGTATAGTGTGTAATGCAGGGTGGCGATCAGAGGAgttggccaaaaaaaaaagcagaacaaaGTAGTTGGACACCATGAATGGGTATTCTTGGTCGTGCTTTGACGCCAGGATAAGTTAACAAGTGGACACTTAAGGAGAGGCCTTTGCTAGCCAATTATCTGGAGGACTGTGAATTTAGCAACTGCTTTTGTAACAGTGTTGCCAGAGTGCACTGCTGCTGTAGCTCCACACTAGGAGTACTGTCTGTGATTGTGGCCCCGACAGACTCTTTACTATTGATTCTGTTCAACAGGTTCGTTTTCTGTCATTCCAGCATCATTCGTCAACTGCTCAATCCTCAATAATGAAGTTTTAACCCCATTTTAACTAACCAAGTCTTTAAAGATCTAACATTCTTTTGATGGCAACTCAACATCTGTACATTCCTCTCACTAAAAGCTTTGAGTAACAGCCTCTCAACTGACTTTATTATCTGTTGCCTTGGATTAGATTTACGACCCAACTggctaaacatttttttttactgaatcaCCATGCCTCTAGGGGAAGGACCAGTGCTAACTCATTTTGATAGGCGTACTTTGTCTTCTGAAATAGGCACTGTCCCTCCTGTGAACATGTGAAACGTGTTGGCGTGATGTGTGTCACTGGAATATGATAAGGAAATCGGTAACTCCTAAATACAGGCATTGCAGTTACGCTAAAGATCACAAACCATATGTAACGCTCTCTGCCAGGAATGGCTGAGACTCGAGGGCAAATCACAAATTGTGTCCCAGCTATTAGCTCGCTCTCTTTTGTAAATTTGGGGCTTTtgctttaatttcttatacccGATTAATCATTCCTGCTACTGAAAGCACATTTGTTAGCTTCATAGTCATTAAGGATGTGTTATTACGTGTGGGATTTGAACAACAAACGTGCAGAAACCTTTTTTGTGGAGTCCAAATAGACATGCCCTCATTCCATATCAGCATATCTAGTTCAGATCTGCTTGGCGCAAAGGGCTTGTTGTtgcaaagtttttctttttctgcctatcttttttttttctttttttttttcctgtgttcAAATTTTCCACAAATGTTATTACAAGAGCTCAAATTAGACCATAAACAATATTGCTCAGTTTTATGGTATCAAATGATGGTATTGATATAGTTTAATCTATAGATACAAACTAGATATTAAGAGAGGCTCAGGCAATTGGTATGTCAAAGATGGGTGATTTTAAGACAGTGTCAAGGAGAAAACAATTGGACTGTCGCAGAGCAAATTTTCCAATCTGACCTATTTTAGGCTTGAGCTGTTTGCTCCTTGGTTCAGACCATGAAATCAGTTCTTGTCATACCTCTGAGTATTACCAAAATATCatactttattgtttttaaaccaTCACACATCACATTTGCTTATTCCTACCAAGGAAATATGATGCATGTGAGTTTCCCCATGAAAATGCTTTATGTTTGGTATGAATGGATTACAGTATTTAAGCTAGCAGTAATCATAGATAGTGGTGACctcaatgcagaaaatacatttattttttcatcattttaaaGCAACAACGCAATAAGGCAGTTGTGAATTTCCAAGAAATTACAGTATTTTCCTCCTGActagaaatatatatttaaatttgatTGCCACTGATAACTGCTGTATAACTTGGCGTTAAGAATAGTGATTGGGAAATCGGTTTGCTGATTCATGACATTAGTTGACAAGGTGCATCATTATGGAAGTCCTCTCTCTTGATAGACAATATTTTTGATGTTAAATCATTTTGCAAATGATCTGTAAATTGCCTTTTTATTTAAGTGCATTGATTGTATAATATTGAGTCCATATTAATGCAATGTATTGAGCATTCCGTGACCTACAGAATAAACCCTGGactttca

Function

symbol description
tpra1 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human TPRA1 (transmembrane protein adipocyte associated 1).

NR:

description
PREDICTED: transmembrane protein adipocyte-associated 1 isoform X1

GO: NA

KEGG:

id description
K22988 TPRA1, GPR175; transmembrane protein adipocyte-associated 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798268.1 True 3365 mRNA 0.43 11 11855465 11862835

Neighbor

gene id symbol gene type direction distance location
LOC120557715 NA coding downstream 321 11780162 ~ 11855144 (-)
LOC120557709 plxna1 coding downstream 116476 11531403 ~ 11738989 (-)
LOC120557331 evc2 coding downstream 494325 11343476 ~ 11361140 (-)
stx18 stx18 coding downstream 591976 11245143 ~ 11263489 (-)
tacc1 NA coding downstream 622635 11200170 ~ 11232830 (-)
trim107 NA coding upstream 701 11863536 ~ 11867398 (-)
zgc:123305 LOC103368761,LOC104959439 coding upstream 5302 11868137 ~ 11880506 (-)
LOC120557460 LOC104959439 coding upstream 18350 11881185 ~ 11898847 (-)
LOC120557464 tgif1,LOC103375645,LOC108230274,LOC106534656,LOC107382471 coding upstream 45261 11908096 ~ 11915087 (-)
vstm2l LOC103354992 coding upstream 265157 12127992 ~ 12151687 (-)
LOC120557710 NA non-coding downstream 75431 11763081 ~ 11780034 (-)
G37670 NA non-coding downstream 105092 11750032 ~ 11750373 (-)
LOC120557711 NA non-coding downstream 112015 11741570 ~ 11743450 (-)
G37486 NA non-coding downstream 693794 11161134 ~ 11161671 (-)
G37485 NA non-coding downstream 697588 11157425 ~ 11157877 (-)
G37679 LOC107098295,LOC108267514 non-coding upstream 7892 11870727 ~ 11973601 (-)
G37794 NA non-coding upstream 248269 12111104 ~ 12112004 (-)
G37812 krt18,LOC103386112,LOC107385534,LOC105931717 non-coding upstream 414036 12276871 ~ 12278670 (-)
G37813 NA non-coding upstream 420933 12283768 ~ 12286834 (-)
G37820 NA non-coding upstream 437398 12300233 ~ 12300493 (-)
LOC120557334 cytl1 other downstream 512312 11340758 ~ 11343153 (-)
G37432 LOC106915059,LOC106958204,LOC102221633,LOC103464975,LOC100700174,LOC101482873,LOC102210230 other downstream 802380 11051299 ~ 11053085 (-)
LOC120557925 tmem233 other downstream 866647 10983070 ~ 10988818 (-)
fam219aa fam219a,LOC101484940,LOC100701621 other downstream 911826 10932235 ~ 10943639 (-)
tpgs2 tpgs2 other downstream 1319112 10532526 ~ 10536353 (-)
dlgap4b LOC103354995,LOC104959427,LOC102311431,LOC102791764,LOC101471735,LOC103464946 other upstream 53032 11915867 ~ 12041000 (-)
G37799 tgm2,LOC103354993,LOC105931743,LOC107088490 other upstream 260610 12123445 ~ 12124452 (-)
G37805 LOC104936998,LOC103354991 other upstream 353368 12216203 ~ 12217190 (-)
G37861 NA other upstream 630094 12492929 ~ 12496235 (-)
G37876 NA other upstream 720600 12583435 ~ 12584453 (-)

Expression


Co-expression Network