LOC120557715


Basic Information

Item Value
gene id LOC120557715
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 11780162 ~ 11855144 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798269.1
AGTTTGACCTTTTTATTGGAGCGTTTTACCACCGGGCGCTGTGGCGGCGACTCCTGCCGCTCTCTTATGTCTCCacacagtttttattattttttctaattCGGTGCCAACCGACAGCTGGTCAAAATGGGAGGTAATGGCAGCACGTCTAAGAAAGTGTCATTCGGACTGGACGAGAACGAGAAGGTCACAGTAATTGAAGGAGTAAAGCTCTCAGAGGATGTGCTTCGGCGGATAAAGGAATCTCAGGGGTCTGACAGCGCCAAGCCACCATCGTCTCCACCAGATGATCACCAACAACCAACAACTCCAAAACCAACAGGACCTACCACTACAGAAATACAGGAAGAAATCCGCAAAAGCTTTGAGCATCAACAGGCCCTGGTGCAGGAGCAGTTGGCCAGATTGGctcagaaggagagagagacaggagcaACCTCAGGCCTGGATGAGCTGACCCCGGCCCTCCTCATCGAGAAAGGAAAGGCCCATGAAGAGCAACAAAAGGCCAAGATACTGCCAGCAGATTTGGATGCCTGGgcCAAACAACTGGGGAGGAAAGAGAAGGAACTGACCACCATATCCAGCTTCTATAAAGAGCAACTAGAAATACTGGAGAAAAAGAATGTTGACAACTACAAACAGATGGCTGAACAGTACAACGAGGCAGCTACTAAAGCTGAGGCCTACATCCGACCTCGACAGACTGCTTCTGTGTGCAGTGAGCTGCAGGCAAAGGTGCTCCAGTGCTACAGAGAAAATCCCCAGCAGACCCTGCACTGCTCCAGCCTGGCCAGACAGTACATGACCTGTGTCCAGCAAGCCAAAAAGGTACAGAAGGTACAAACGCTCATCTCCAATTCAATGGCACAGGCTACGATGCCCTCGGATGCACTTGGCAAGTGAACAGCTAACCTGCCCGCCAGCATATCTGCTTGCCAGCCGAGCACCAAGAGCTCACTGACGAATCATGGCTGAAAAAACCCCAGAAAGCAGGAgcagaagaaggagaagaagtgAAGAAGGAGCGAGCATACCAGATCTGTCCATTTCTCGCATCCTTCTGTCCTtcttctatccatccatccatttatttGTCCACCATCACTGAACAACCCCCTCCTCTTTCCCACTCACCGTCCTTCCTGGTTTTTGAGTGTATTATCTTGACATGTCACTCCAGAGTGTATGATGTGCTGATTTATTGTCGTGTTGCGGCAGCACACCCCTGCCGCCGCTGAAATAAATCCCAGTGATCCGGTGGTGATGAGACTGCA
>XM_039798270.1
TTTGACCTTTTTATTGGAGCGTTTTACCACCGGGCGCTGTGGCGGCGACTCCTGCCGCTCTCTTATGTCTCCacacagtttttattattttttctaattCGGTGCCAACCGACAGCTGGTCAAAATGGGAGGTAATGGCAGCACGTCTAAGAAAGTGTCATTCGGACTGGACGAGAACGAGAAGGTCACAGTAATTGAAGGAGTAAAGCTCTCAGAGGATGTGCTTCGGCGGATAAAGGAATCTCAGGGGTCTGACAGCGCCAAGCCACCATCGTCTCCACCAGATGATCACCAACAACCAACAACTCCAAAACCAACAGGACCTACCACTACAGAAATACAGGAAGAAATCCGCAAAAGCTTTGAGCATCAACAGGCCCTGGTGCAGGAGCAGTTGGCCAGATTGGctcagaaggagagagagacaggagcaACCTCAGGCCTGGATGAGCTGACCCCGGCCCTCCTCATCGAGAAAGGAAAGGCCCATGAAGAGCAACAAAAGGCCAAGATACTGgcCAAACAACTGGGGAGGAAAGAGAAGGAACTGACCACCATATCCAGCTTCTATAAAGAGCAACTAGAAATACTGGAGAAAAAGAATGTTGACAACTACAAACAGATGGCTGAACAGTACAACGAGGCAGCTACTAAAGCTGAGGCCTACATCCGACCTCGACAGACTGCTTCTGTGTGCAGTGAGCTGCAGGCAAAGGTGCTCCAGTGCTACAGAGAAAATCCCCAGCAGACCCTGCACTGCTCCAGCCTGGCCAGACAGTACATGACCTGTGTCCAGCAAGCCAAAAAGGTACAGAAGGTACAAACGCTCATCTCCAATTCAATGGCACAGGCTACGATGCCCTCGGATGCACTTGGCAAGTGAACAGCTAACCTGCCCGCCAGCATATCTGCTTGCCAGCCGAGCACCAAGAGCTCACTGACGAATCATGGCTGAAAAAACCCCAGAAAGCAGGAgcagaagaaggagaagaagtgAAGAAGGAGCGAGCATACCAGATCTGTCCATTTCTCGCATCCTTCTGTCCTtcttctatccatccatccatttatttGTCCACCATCACTGAACAACCCCCTCCTCTTTCCCACTCACCGTCCTTCCTGGTTTTTGAGTGTATTATCTTGACATGTCACTCCAGAGTGTATGATGTGCTGATTTATTGTCGTGTTGCGGCAGCACACCCCTGCCGCCGCTGAAATAAATCCCAGTGATCCGGTGGTGATGAGACTGCA
>XM_039798271.1
GTTTGACCTTTTTATTGGAGCGTTTTACCACCGGGCGCTGTGGCGGCGACTCCTGCCGCTCTCTTATGTCTCCacacagtttttattattttttctaattCGGTGCCAACCGACAGCTGGTCAAAATGGGAGGTAATGGCAGCACGTCTAAGAAAGTGTCATTCGGACTGGACGAGAACGAGAAGGTCACAGTAATTGAAGGAGTAAAGCTCTCAGAGGATGTGCTTCGGCGGATAAAGGAATCTCAGGGGTCTGACAGCGCCAAGCCACCATCGTCTCCACCAGATGATCACCAACAACCAACAACTCCAAAACCAACAGGACCTACCACTACAGAAATACAGGAAGAAATCCGCAAAAGCTTTGAGCATCAACAGGCCCTGGTGCAGGAGCAGTTGGCCAGATTGGctcagaaggagagagagacaggagcaACCTCAGGCCTGGATGAGCTGACCCCGGCCCTCCTCATCGAGAAAGGAAAGGCCCATGAAGAGCAACAAAAGGCCAAGATACTGCCAGCAGATTTGGATGCCTGGgcCAAACAACTGGGGAGGAAAGAGAAGGAACTGACCACCATATCCAGCTTCTATAAAGAGCAACTAGAAATACTGGAGAAAAAGAATGTTGACAACTACAAACAGATGGCTGAACAGTACAACGAGGCAGCTACTAAAGCTGAGGCCTACATCCGACCTCGACAGACTGCTTCTGTGTGCAGTGAGCTGCAGGCAAAGGTGCTCCAGTGCTACAGAGAAAATCCCCAGCAGACCCTGCACTGCTCCAGCCTGGCCAGACAGTACATGACCTGTGTCCAGCAAGCCAAAAAGGTACAGAAGGTACAAACGAGCTCACTGACGAATCATGGCTGAAAAAACCCCAGAAAGCAGGAgcagaagaaggagaagaagtgAAGAAGGAGCGAGCATACCAGATCTGTCCATTTCTCGCATCCTTCTGTCCTtcttctatccatccatccatttatttGTCCACCATCACTGAACAACCCCCTCCTCTTTCCCACTCACCGTCCTTCCTGGTTTTTGAGTGTATTATCTTGACATGTCACTCCAGAGTGTATGATGTGCTGATTTATTGTCGTGTTGCGGCAGCACACCCCTGCCGCCGCTGAAATAAATCCCAGTGATCCGGTGGTGATGAGACTGCA
>XM_039798272.1
AGTTTGACCTTTTTATTGGAGCGTTTTACCACCGGGCGCTGTGGCGGCGACTCCTGCCGCTCTCTTATGTCTCCacacagtttttattattttttctaattCGGTGCCAACCGACAGCTGGTCAAAATGGGAGGTAATGGCAGCACGTCTAAGAAAGTGTCATTCGGACTGGACGAGAACGAGAAGGTCACAGTAATTGAAGGAGTAAAGCTCTCAGAGGATGTGCTTCGGCGGATAAAGGAATCTCAGGGGTCTGACAGCGCCAAGCCACCATCGTCTCCACCAGATGATCACCAACAACCAACAACTCCAAAACCAACAGGACCTACCACTACAGAAATACAGGAAGAAATCCGCAAAAGCTTTGAGCATCAACAGGCCCTGGTGCAGGAGCAGTTGGCCAGATTGGctcagaaggagagagagacaggagcaACCTCAGGCCTGGATGAGCTGACCCCGGCCCTCCTCATCGAGAAAGGAAAGGCCCATGAAGAGCAACAAAAGGCCAAGATACTGCCAGCAGATTTGGATGCCTGGgcCAAACAACTGGGGAGGAAAGAGAAGGAACTGACCACCATATCCAGCTTCTATAAAGAGCAACTAGAAATACTGGAGAAAAAGAATGTTGACAACTACAAACAGATGGCTGAACAGTACAACGAGGCAGCTACTAAAGCTGAGGCCTACATCCGACCTCGACAGACTGCTTCTGTGTGCAGTGAGCTGCAGGCAAAGGTGCTCCAGTGCTACAGAGAAAATCCCCAGCAGACCCTGCACTGCTCCAGCCTGGCCAGACAGTACATGACCTGTGTCCAGCAAGCCAAAAAGGTACAGAAGAGCTCACTGACGAATCATGGCTGAAAAAACCCCAGAAAGCAGGAgcagaagaaggagaagaagtgAAGAAGGAGCGAGCATACCAGATCTGTCCATTTCTCGCATCCTTCTGTCCTtcttctatccatccatccatttatttGTCCACCATCACTGAACAACCCCCTCCTCTTTCCCACTCACCGTCCTTCCTGGTTTTTGAGTGTATTATCTTGACATGTCACTCCAGAGTGTATGATGTGCTGATTTATTGTCGTGTTGCGGCAGCACACCCCTGCCGCCGCTGAAATAAATCCCAGTGATCCGGTGGTGATGAGACTGCA
>XM_039798273.1
GTTTGACCTTTTTATTGGAGCGTTTTACCACCGGGCGCTGTGGCGGCGACTCCTGCCGCTCTCTTATGTCTCCacacagtttttattattttttctaattCGGTGCCAACCGACAGCTGGTCAAAATGGGAGGTAATGGCAGCACGTCTAAGAAAGTGTCATTCGGACTGGACGAGAACGAGAAGGTCACAGTAATTGAAGGAGTAAAGCTCTCAGAGGATGTGCTTCGGCGGATAAAGGAATCTCAGGGGTCTGACAGCGCCAAGCCACCATCGTCTCCACCAGATGATCACCAACAACCAACAACTCCAAAACCAACAGGACCTACCACTACAGAAATACAGGAAGAAATCCGCAAAAGCTTTGAGCATCAACAGGCCCTGGTGCAGGAGCAGTTGGCCAGATTGGctcagaaggagagagagacaggagcaACCTCAGGCCTGGATGAGCTGACCCCGGCCCTCCTCATCGAGAAAGGAAAGGCCCATGAAGAGCAACAAAAGGCCAAGATACTGCCAGCAGATTTGGATGCCTGGgcCAAACAACTGGGGAGGAAAGAGAAGGAACTGACCACCATATCCAGCTTCTATAAAGAGCAACTAGAAATACTGGAGAAAAAGAATGTTGACAACTACAAACAGATGGCTGAACAGTACAACGAGGCAGCTACTAAAGCTGAGGCCTACATCCGACCTCGACAGACTGCTTCTGTGTGCAGTGAGCTGCAGGCAAAGGTGCTCCAGTGCTACAGAGAAAATCCCCAGCAGACCCTGCACTGCTCCAGCCTGGCCAGACAGTACATGACCTGTGTCCAGCAAGCCAAAAAGAGCTCACTGACGAATCATGGCTGAAAAAACCCCAGAAAGCAGGAgcagaagaaggagaagaagtgAAGAAGGAGCGAGCATACCAGATCTGTCCATTTCTCGCATCCTTCTGTCCTtcttctatccatccatccatttatttGTCCACCATCACTGAACAACCCCCTCCTCTTTCCCACTCACCGTCCTTCCTGGTTTTTGAGTGTATTATCTTGACATGTCACTCCAGAGTGTATGATGTGCTGATTTATTGTCGTGTTGCGGCAGCACACCCCTGCCGCCGCTGAAATAAATCCCAGTGATCCGGTGGTGATGAGACTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798269.1 True 1277 mRNA 0.50 10 11780162 11855144
XM_039798270.1 False 1254 mRNA 0.50 9 11780162 11855142
XM_039798271.1 False 1171 mRNA 0.50 9 11780162 11855143
XM_039798272.1 False 1163 mRNA 0.50 9 11780162 11855144
XM_039798273.1 False 1153 mRNA 0.50 9 11780162 11855143

Neighbor

gene id symbol gene type direction distance location
LOC120557709 plxna1 coding downstream 41173 11531403 ~ 11738989 (-)
LOC120557331 evc2 coding downstream 419022 11343476 ~ 11361140 (-)
stx18 stx18 coding downstream 516673 11245143 ~ 11263489 (-)
tacc1 NA coding downstream 547332 11200170 ~ 11232830 (-)
loxl2a loxl2,LOC103366914 coding downstream 583777 11165773 ~ 11196385 (-)
tpra1 tpra1 coding upstream 321 11855465 ~ 11862835 (-)
trim107 NA coding upstream 8392 11863536 ~ 11867398 (-)
zgc:123305 LOC103368761,LOC104959439 coding upstream 12993 11868137 ~ 11880506 (-)
LOC120557460 LOC104959439 coding upstream 26041 11881185 ~ 11898847 (-)
LOC120557464 tgif1,LOC103375645,LOC108230274,LOC106534656,LOC107382471 coding upstream 52952 11908096 ~ 11915087 (-)
LOC120557710 NA non-coding downstream 128 11763081 ~ 11780034 (-)
G37670 NA non-coding downstream 29789 11750032 ~ 11750373 (-)
LOC120557711 NA non-coding downstream 36712 11741570 ~ 11743450 (-)
G37486 NA non-coding downstream 618491 11161134 ~ 11161671 (-)
G37485 NA non-coding downstream 622285 11157425 ~ 11157877 (-)
G37679 LOC107098295,LOC108267514 non-coding upstream 15583 11870727 ~ 11973601 (-)
G37794 NA non-coding upstream 255960 12111104 ~ 12112004 (-)
G37812 krt18,LOC103386112,LOC107385534,LOC105931717 non-coding upstream 421727 12276871 ~ 12278670 (-)
G37813 NA non-coding upstream 428624 12283768 ~ 12286834 (-)
G37820 NA non-coding upstream 445089 12300233 ~ 12300493 (-)
LOC120557334 cytl1 other downstream 437009 11340758 ~ 11343153 (-)
G37432 LOC106915059,LOC106958204,LOC102221633,LOC103464975,LOC100700174,LOC101482873,LOC102210230 other downstream 727077 11051299 ~ 11053085 (-)
LOC120557925 tmem233 other downstream 791344 10983070 ~ 10988818 (-)
fam219aa fam219a,LOC101484940,LOC100701621 other downstream 836523 10932235 ~ 10943639 (-)
tpgs2 tpgs2 other downstream 1243809 10532526 ~ 10536353 (-)
dlgap4b LOC103354995,LOC104959427,LOC102311431,LOC102791764,LOC101471735,LOC103464946 other upstream 60723 11915867 ~ 12041000 (-)
G37799 tgm2,LOC103354993,LOC105931743,LOC107088490 other upstream 268301 12123445 ~ 12124452 (-)
G37805 LOC104936998,LOC103354991 other upstream 361059 12216203 ~ 12217190 (-)
G37861 NA other upstream 637785 12492929 ~ 12496235 (-)
G37876 NA other upstream 728291 12583435 ~ 12584453 (-)

Expression


Co-expression Network