LOC120557727 (LOC104967509,LOC102788387)


Basic Information

Item Value
gene id LOC120557727
gene name LOC104967509,LOC102788387
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 18231769 ~ 18286227 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798291.1
tgtcgTGAACGCGCcagcctgtgtgtgttggtggtggtggtgtagatgtaggagcaggaggagagacTCTGCAGTGTCTTGGCAGCTGCATTAGTGCATCTCCCACCGTCCGCGATGCCTCCGCGGCCAATGCCTGCCTCCTCCGCGTCCACTTGACAACAGAAACCGATATGAACTCGTTGGGAAACTGAGCCGGGACTCACACTTCACactcgctagctagctatatgccCCGGTCCCCGGAGCGCTTCATACAAGCACAGAAACCCCGTGACGAGAATTGTTAATGGAAAATGGCGATAGGCAAAGGGTCTTGCAGCATCGTCTGCTTGGTATCTATCCAGATTATCTTGATTTCCAGCGCATCGTGGCCTGGAGCAGCGGGTCTTACATTCCCCCAGCAATACACGATAATGCACTGGGCCAGGCGTATCGAGCAGGAGATTGACAGAGTCTTTCAGCACATTACTGGAGCTCAGCAGTTGAAAGGGATATACAATGAAGAAAGACGACGGTTTAGTCTGGTGAAGAATCAGCCTCGGAAGATTGTGGAGAAGGCGGCCTCAGATATAGAGAAACTCCTGGCGAAGAAGCGCAAAGCACTCGATAGGTTAGCCAGTGAAGCAGAGCGGCTCCAGCGAGAGCATCAATGGCGGGATGGAATCAAGGAGCTCGACATGGCTTATTATGACTCCAAGGCTGAGCTGGATTATTACTCCAtggatggagaaggagaggTGGAAAACCCTTCACACATCAAGCTGGAGTTTGTTTATGATCcaaacttcaaaaacaatgTCAACTATTCCTACACAGCTGTTCAGATTCCCACAGATATTTATAAAGGAGCTCCAGTCATTCTGAATGAGTTGAACTGGACGCAGGCGCTGGAGAAAGTGTTCATGGAGAACAGTCAGGAGGATCCGTCACTGCTGTGGCAGGCGTTTGGGAGTGCGACGGGTGTCACTCGCTACTACCCAGctTCACCTTGGAAAGCCCCCGATAAAATCGACTTGTATGACGTCAGGAGGAGACCCTGGTACATCCAGGGAGCCTCATCCCCCAAAGATATGGTCATTCTTGTTGATGTGAGCGGCAGTGTCAGTGGACTCACCCTGAAACTCATCAAAGCGTCAGTGATGGAAATGCTGGACactttgtctgatgatgactaTGTCAACGTGGCCAGGTTTAACGAAAAGGCAGAGGCCGTGGTTCCCTGCTTCAAACATCTCGTCCAGGCTAACGTGCGCAACAAAAAGATCTTCAAGGACGCAGTGCAGCAGATGCAGGCTAAAGGCACCACTGACTACAAGTCTGGATTTCATTTTGCCTTCAACCAGCTGTTAAATaAGACAAATGTTCCTCGGGCCAACTGCAATAAAATAATCATGCTGTTCACTgatggaggagaggacagagctCAGGATGTTTTCATGCAGTACAACTGGCCCAACAAAACGGTTCGAGTTTTCACCTTTTCTGTGGGTCAACACAACTATGATGTCACACCTTTACAGTGGATCGCATGCACCAATAAAGGTTACTATTTTGAGATCCGTTCCATCTGTGCTATAAGGATTAACACCCAGGAGTACCTCGACGTGCTGGGCCGCCCCATGGTTCTGGCAGGCAGCGATGCCAAACAGGTTCAGTGGACCAATGTGTATCAGGATGCTTTGGGTCTTGGCATGGTAGTAACTGGGACTTTGCCTGTATTTAATCTCACAATGGATGGAAACTCACAGAATCAGCTGATATTAGGTGTCATGGGAGTCGATGTGCATCTAGATGAGATAAAGCGACTAACACCACGGTACAATCTTGGAGCCAATGGATACATATTTGCCATTGATCCAAATGGATATCTTCTCCTTCACCCTAATCTTCAGCCAAAGCCGGTAAACCTTCCTGAGCCTGTGACGCTGGACTTCCTGGATGCAGAGGTGGAGGACAGCAATAAAGAGGAGaTCCGGCGACAAATGATTGATGGAAGACCAGGTGAAATGCAGGTCAAAACTCTTGTCAAGTCGATTGATGAGCAATACATTGATGAGGTGTACAGAAGTTACACCTGGACTCCTATCAACGGCACCGATTATAGTCTTGGTCTGGTATTACCCCCCTACAATGAATACTTCATCCAGGCAGACCTGAGTGATGTGATGCTCCAGCTCCAGTATATGCAGTCGCTGCTGCCCAGCTCCTTTGAATCCTCAGGACATGTGTTTCTGGCTCCAAGGGAATACTGCAAACGTCTGCATCTTTCTGACAACAACACCCAGTTTTTGCAGAACTTCCTGACGCTCATGCTGGACATTTCTCCAGAATCtgatgagtGTGACCAAGGCCTCATCCACAACCTGATTTTGGATTCTAGGATTATCGGGCAGCTGGCCTCTCGTGTTTGGAAGAACAAGGACTTGAATTCGTATGGCTTCCTGGCTGTATTTGCATCCACTGATGGAGGTATAACACGTGTTTTTCCCAACATAGCTGCTGAGCTTTGGGATGAGGATCCTGAACCTTTCAATTCAAATTATTACAGAAGGAGCCTTGACAACAAAGGCTACATGTTCAGAGCTCCATCAAGATCCTtgttggACGACCCTGTAGGCGCAGAAAACGGAACCGTTGGAATTCTGGTTAGTTCGGCTGTAGAGGTTAATTTAGGGGGAAAACTGCTCAAACCTTCAGTGGTCGGAGTGAAGCTGGACTTGGAGGCGTGGGTGGACAAGTTTAAGATCCTGGCCAGCAATGTGTCAGACAGTCGACAGGGCTCACACAAGTGTGGACCATCCAGAAGCTGCGAGATGGACTGTGAAGTGAACACTGACGACCTCCTCTGCTACCTCATCGATGATGGTGGATTTCTGGTAATGTCCAATCAGAGAGATCACTGGAAAAAGATCGGTCTTTTCTTTGGTGATGTGGACCCTTACCTGATGCATGCACTCTACAACAGCTCAATCTTCACTCGCCGTCAGTCTTTCCACTACCAGTCTGCATGTGAACCAGTCAGCAGCAGCCATACTGGTGCAGCACCGAGGGGCATCTTTGTGCCGTCCATTGCTGACATCCTCAGCTTGGCCTGGTGGAGCTCCACGGTTGCATGGTCTGTGACCCAGCAGCTACTGTATGGACTGGCCTACAACAGCTGGCTCTACCAAGATGATCTCCTGGTTGAAGGTTTTGAGTCGAGGGAAAGCAGCTGTATGACTATCCAAAGCCAGTTCTACTTTACAAACACAACCAACTCCTACAACGTGCTGCAGGACTGTGGAAACTGCTCACGGCTGTTCCACGCAAAGCGCATAGAAAACACCAACCTCCTCTTTGTGGTCGCTGAGACGCTCCCCTGCAGCTCATGTGAGATCGAGAGGTTGACACGGATCAGGACAGAATTTCAGGAGGAGAATCCATGCGAAGTACTGAGCAACGCGCGATATCGTAAAGGCCCGACATCCTGCTTTGACTACAGTGCCTTAGAAAACGCGTCAGAGTGTGGGCGGGGTCATGCACTGCAGTCCTCCATAGGAGTCCTTCTCTTCATTCAGCTTATTCTGCCTTTTTTCCATCTCTGACACGTGCAAACACTCTAATTGACATCTTTCATCTCATTGGGTTTAGGCTCGGATCTACTGAAGGTCAGATCAAACAGCAACTGCAAAatgattctttttttatctACAAATGGCACATAGTGCATTTGTgcttggaaaaaaatatgtggaTCAGCTCTTAGTGCTTTTTGCCTTATTGCTTATGCATTTGTTGGTGTTTCAGGGCTCGAGTGCAAAATATAGGAAGAGAATGTGTTGAGTGTGCATGCTACTTAAACTAGGACAAGCATGTTTAACATTTTTGCATACGGGCTCAGCCATGTAAGCAACCACCAAAATGTCAGGGAGGCAACTGAAATGTACTTTTAACAGGCCAATAAATGATCACCCAGCAGGAACAGACGTCAGTCACAATTTTAGGTTGAGTTGTGGTGGTGAAATGATAAAAGATCTAAAAACTCAGTTGGATTTATATGCTGTGTGGTAAATACACAGTGGTGGAAAGAagtcagatcttttacttaagtaaagttgCTCCAGCAATTCCAGTCAAAGTCATGCATTCAAGATTTTAAAAGCAGATAAGTATTAGCAACGAAATGAACTTAAAGTATAAGAAATACTCATTTGACAGCAGAATGGGTCCTGCCAGTGTTATCGCATTATATTATCagataattattattgttaatgtattaagcatgcattttaatgttgtagctcATCAAAATTGAGCTAATATttactactttatatactgttgggttgTTTTATGTATAACAATCATTTTAAAAACTCAGCATAGGTTTTCtatgtaaataattaaaatgaaagaaaatacagctgtcagataaatgtagtgggaTAACAAGGACAAAATTTCCTTCTACGCTATAGTGGAGTCGAAATATTAAGGTGctctgtggagttttcttgcAAATACAAAGGTTCTGCTTAAAATCAATGTTTTTTACCAAACTACAATATGTGTATTCTTGAGCTCCAACAAACGTGTTGAATGTTCTCTCTGCCAAAATCTTAAAACCACGTTGTTTACATCAATGTTTACTTGCTTGCAGTCATCTTCTTCCCTGCATTTTCTGGCATATTGCAGCATTTCTCGACACGTTACTGCCACCTGTAGGTCAGTGGAATAGCGTGAAACCATTGGCTGTACTGTATAGCGTGTACTCAAAAACATATCTTCATAGCGCTACTAGTGGtcaaaactccacagggtacaTTAAAGTAGCAAAAAATATAATTACTCATGTAAAGTACAAGCAACATCAACACTATACCCAATtatagtacttgagtaaatgtacttaaaggcaCCCTCCagtgtgtttttacatttttatgatatttaatattttagttgtaccttagtttagtgtgttattttattttaataatagcaTTTCTTTGTGCAGTGAATGGATGCAATCAAGGCAGTGTTATTCAAGAAATTCCACCTGCAGAAATAGTactagtaatagtaatagtaatagactgtctcactcactctctttgTCTGATAAACAGTGAATCCATCAAATGAAGTGCCATATCACTGTTTTCAAAAATGCTGTATTGTTAGCTGCAATCTTTTTGCCATGCTTATGGATTACGTCCGACTATAATCCACATACCCATTCTCTGTTTGAGAAAGAACGTTAACCATTACACAGGCAATACTGGCTGGAGGGGGCCTTTTAATTACTTCTTCAAATACAACACAATACAATACTTGTGCAACGCCACCACATGTTTTATCCAGAGGAGTGCCGTGATTGGCCGGACACAGTTGTTAACACAACAACTTTGTGGAGAGAGTATTCTGAGTTTTTAGATCTTTCACTGTCACTGTCTGACACCTTGTTGATCAGCTCTGAATATATTTAAATGACTTTTCAGCTGTATATTTAACAGCATTTGTGTATTTGGGATGGCTTATTGGATAATTATAACTGCAGTCCACCTTAATAGTTATCTGTTCAAATGGATTCACAATGTTCATACAACTGCTGGGTGTAAGCTATCAAAGGCATTTACACAACTGacagttttacattttgcacaCCACACAAAAAGCTAACTACTACAGCATGAAAATGTAAATAGACAGAAGCTCAGATGCTGCTGCTTCCGGCAACTTCTGCTTTTGTTGGCTTTCTGAAATTCAAAATGAATTATCTGCACCAGTTTTCATTTGCATGTTCCGTCCTAGTACATGTCTTTGCACATAAAGGAGCTCCCTGCACCTACAGCAGTTTTTACATGATAGTACATCCGGGCCTTAACCTCACATTCACTTCAGTGTCTTTCAATCCACCTCTGATCTTTGCCAAGACAGTTTCAGTACTATAAATTGTATCATACATGACATGACCCAGAATGATTTCCCTTTGCCATCTCAAGTATGCTCTGTCTCTTAAATCTAAATATAGTATATTTGGACGTATTTATTTCCCCTAAAAATATTTTCTCAGAGCACTTTGACAAATGAGACCACAGGTGAGAAAAGCCAGTATGATGGATTGTTAAAGTCAAGGTTTGTTTTGCTGAAATGCTTCCACCGATACTCTGTATGATCTTTAAGTGCTTCCAGTTGATAAGAATCGTTGAAGGGTGTAAAATCGGTTACAAACAGACCAGAATGAACAAATATTAACCGGGATttgtaacaaaaatatagtAGTGAATTCTCCAAACCACAGCATGGTTTAGTGCAATAATGATGTGATAATCTGATACTTGCTTTTAGCAGTAATTACCATGACCATTATTTTATCATCAAGTTTAGATTTTAAATAATTCTACATTTATATTATACATGCAGTGTTATCTCTGTAGACTTATAGGACAAAACATGTGCAGACGTCAGTGTGTGGCTGACATGTTTTAAACATTAGTTGTTTGATCGAAGGGAAGCTCTCTGTAACTTTTTTGTATCTTGTATCGCCAATATTTGTCAAACCTGAATTTATGCACTTATGTATGCTTCTGTATGGGGAATGTAGCTTCTGAACAGCTTTCAGTGTTATCAATATGTGATGCTTTTTGGCCCTCTGTTGAGATTCCCCTGATGTCTCGTTCAAAGTGATGATTCGCTGTGGTAGAATATTTTAATTGTATCATGCATACCTCGTCGTGGCGGTGATATCTGATTCCACTTTTTACTAAATTGTAAAGCTGTAAGACTTAGTAAGTTAGTCACAATGAAATGTCTGCCCAGTCGTGGATGAGGTCATTACAACTTCAGTTAGAAGTATTGcactaaaaaatgttttagattgtacaatttatttaatttatgtcAGGGGTAAAACTGTTTTTGTTCAGGTTTAATAAGCACATAACAGAACATATACAACATACAGTTttcaacacaacataacattagggaaataaatgtgttagtgtgctatattaaaataatgttttaagaCAAAAAGTATATGTTCATTCAGAAAAAGCTAAATTACCTTAAAAAATGCTTAAAATTACATctagaaaatgtttaaatgctGGACACAAGATGTATCCTACTGGACCAGAATTGACTATTCTGTCACAAAGCATGCTTGTACATACAGTTGAATACATGTTAAACTCAGATTGAAGCACAGAGAAAATGTTCCCCCTTtcagcagatgaatgtgaaaacTCGGCACATGCCTCATTCTGCAAAGTGAAGTTGAAGCATCCAAGTGAAGTGACAATAAGCTGAACACATTTTTGAGTTGATAGGGGAATTTCAATTATTAAAAGGAATTCTAGTGAAGAAGAGCCTTGGAACAGTGTATCACTGTCTTATTCGTGAGGATTTGCATGATAAAATCCTGAAAACATTTTCCCACAGTGATTTCGTCAGCCCCTGAGGTCTTCTTGTGTTTTTGATCATTTGATCTGGTTAAAGAGTTAATGGGGAGGGGtatttttaaaaaccttttttgacaaaatatttgtaaaatgctgtttctctctgtctgcctggtgTTCCACCCTGCAGTGCCTTGTTGCACTCATTTTAGATGGCAGGAACTTTTGGCTCTTAGCCATGAGGACGTTCATCCTGCAGGGCCATGCGAACGACACACTTGAATTTCAAGGGTTGCAATGGTCTAGCTTAAAATGGACATCTCTCGGtcaggtaataaaaaaagatgctCTTCATGGACTTATGAAGCATTTTAAAGGAGCACAGCACAGTTTTGAAAGAGCTCAACAGAAGTGTGTCGAGCAGCTGGCCTCCCCTCCTGCCTTCTCGTGAACAGATGTTTGTCAAAGCGACGAGAACAAACTTGCTGCCCTTCTGCTACGTGTCGTTTATCTCTACACTGTGGTTAAGCCTCGAATCAAAGCACAGACACTGTCCATTGACATAGATTTACTTTGTCCCATCTGCACACTGGATATTCTATATTGAAGCCTGTTGAAAACATGTACTTTTCCATTAGGACTGACTGAAACGAGTGAATGTTTATGTACAGTAATACCTACTGTTGTGCATCTCTGCTGTACCCGAGCATGGTGGGGACGCGGAGAAGCAGATAAAAGCTCATCACATTTTGGAGACCTCTGcaaaaacactgctttaaaaaaagaaacaacaaaaaaagctttTACTCTGAGACCTGCAGTAGTAACTTTAGGTCGTATTGCATTACTCAACAACACTGTTGTACATTGAGGGAAAGACATTTTGTGGAACTCTTTATAGCCTACAATATATTACTGTTGAGGTCAGTGTTTCGGTATTTATTTGCATGATATTTTGAACAGTTTACAGATTTATGTACATAGTCTGATGAATATTTTACATTCCTGTCCACTTCCGGCTCTCCAGTACTGTGGGTAGAAGTGAGGGCGCCCTCTGTGGATATTTGGGGTGATGTGGAGGCCTCAGAGCTCTTTGCTGTGTGTAACCGAACAAAGTGGAAAGTTTGACTTCAGTGAAGCCTACAATAACTGTCAGTTTTTAATTTAGGTATTTTGCAGCAAGTTAAAGCACAGAGAAGTTTAGAGGTATGAGCAACATACTGCCTGATTAAACTTTTGTCGTTTATTtaggaaaaaagtgacacaaacacgcTGGAGATGATTTATGCATTTAAAGGCTGTATAACGAACAAATAAGGCAATGGCATGTGTGGGGACACTCCTTTATAAATTAACTTTGTTTATGAAATAGATTtaagtgttgcttttttaatttatttaattattattttgtctgtttatttatttgggTATTGTGAATAATATTTGTACTGGACAGAAAGGAATTGAATGTGTTTGAAGCTTGAGTGGGCACACTAagcaatttaaaagaaaattgcaaaacagacaaaaaaatatatatataccgtaTGTCCATGTACTTTTATTTACCGAGTATCAACACATGAGAATGTTAATGTTTTTTGCTGTAACTTTGCTTTTCATTTTGCTGACAATGTTTACCTGGGACAGTCTCCAATGCCACCTCATTTTTGTACAGTCAATGTGAAGCAGTCAGCAGAAGATGAAGGCTAACTTTGTAAAGATTTTGTCAGTCACATTACaaaaatggatatttaaatgtttatatCTTTGGTGATTAAATGCTGTTGATATTTTTCACTTCA

Function

NR:

description
PREDICTED: voltage-dependent calcium channel subunit alpha-2/delta-2-like

GO: NA

KEGG:

id description
K04859 CACNA2D2; voltage-dependent calcium channel alpha-2/delta-2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798291.1 True 9199 mRNA 0.41 38 18231769 18286227

Neighbor

gene id symbol gene type direction distance location
abhd14a abhd14a coding upstream 19820 18206629 ~ 18211949 (+)
hyal2b LOC103359756,LOC104967514 coding upstream 30477 18196145 ~ 18201292 (+)
rassf1 LOC104967512 coding upstream 44018 18177743 ~ 18187751 (+)
rad54l2 LOC103359734 coding upstream 59639 18158189 ~ 18172130 (+)
LOC120556657 LOC104967522,LOC103359687 coding upstream 219281 18007456 ~ 18012488 (+)
LOC120557883 LOC107385142,LOC107385141 coding downstream 45621 18331848 ~ 18344852 (+)
p4htm LOC103359812,LOC100700943 coding downstream 59522 18345749 ~ 18354841 (+)
kbtbd12 kbtbd12,LOC103464606 coding downstream 81751 18367978 ~ 18371902 (+)
c4h1orf159 LOC104931340,LOC103359840,LOC101474389,LOC108231181,LOC102786121,LOC107100091,LOC102306124 coding downstream 90323 18376550 ~ 18383095 (+)
si:ch211-157b11.14 NA coding downstream 98366 18384593 ~ 18391656 (+)
G39665 NA non-coding upstream 378403 17852516 ~ 17853366 (+)
G39654 NA non-coding upstream 445959 17785259 ~ 17785810 (+)
G39638 NA non-coding upstream 495863 17735486 ~ 17735906 (+)
G39633 NA non-coding upstream 509421 17715412 ~ 17722348 (+)
G39630 NA non-coding upstream 541193 17689804 ~ 17690576 (+)
G39861 NA non-coding downstream 162620 18448847 ~ 18452500 (+)
LOC120557393 NA non-coding downstream 257928 18544155 ~ 18547192 (+)
G39925 NA non-coding downstream 284364 18570591 ~ 18570983 (+)
G39926 NA non-coding downstream 287455 18573682 ~ 18573909 (+)
G39927 NA non-coding downstream 287755 18573982 ~ 18574211 (+)
LOC120557740 acy1 other upstream 5191 18215706 ~ 18226578 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other upstream 36858 18189582 ~ 18194911 (+)
wnk2 wnk2,LOC104946158 other upstream 301651 17904698 ~ 17930118 (+)
LOC120556838 NA other upstream 497758 17720441 ~ 17734011 (+)
G39581 LOC104949003,LOC103357913 other upstream 622553 17607930 ~ 17609216 (+)
oxtrl LOC104920519,LOC103360274,LOC100702815,LOC102207462,LOC102295060 other downstream 1010032 19296259 ~ 19314826 (+)
G40164 LOC103360294,LOC104965627,LOC100702547 other downstream 1038602 19324829 ~ 19326625 (+)
brk1 brk1,BRK1,LOC106565571 other downstream 1138639 19424866 ~ 19426456 (+)
slc38a3b LOC103360384 other downstream 1155781 19442008 ~ 19470998 (+)
LOC120557344 LOC104966310 other downstream 1330954 19617181 ~ 19632519 (+)

Expression


Co-expression Network