LOC120557750


Basic Information

Item Value
gene id LOC120557750
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 42617221 ~ 42630936 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798343.1
agaaagagagtagTAGAGCACCGACAGAAGTTATACGCTCAGTTGCGCGGTAGAAAAACGTTGACTCCATTTCAAACTGTTGATCCATCCGACCGGTGAGATCTGTTCACCGAGTCCCCGCACTACAAACTCCCGGACCGCTTCATATCGACTCCTCAGCTGCTTCAGGTAACCCGCCATTCGGCCAGAAAACCCAGCAGAAACCTGGACCGGATTCACGGACTGGAGAACTGACTCGCTCATTCAtttCATTCAAAGACCAAATGGCTTCCAGATCAGAGGAGGATCTCTGCTGTCCGGTCTGTCATGATGTCTTTAAAAATCCTGTTGTTCTGACatgtagccacagcttctgtaaagACTGTCTGCAGCGCTGGTGGAGACAGAAACAAGCTCGAGAGTGTCCAGTCTGTAAGACGACATCTTCATATTCAAATCCACCTTGTAACCTGGTGTTGAAGAACCTGTGTGAGGCCTTCTTACtggagagagatcagagagcttcaggggctctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcagcagccagtgtgtCTCATCTGCAGAGATTCAGAAACACACTCCAACCACAGATTCAGACCCGTCGATGAAGCTGCACGACAACACATGGAGGAGCTTCAGGAAACTCTGGAGCCCTTAAAGGAGAAGTTAAAGGTTTTTGAACAAATTAAAGTGAAGTTTGATCAGACAGCAAAACACATAAAGCTCCAGGcgcaacacacagagacgcagattaaggatcagtttaagaagcttcaccagtttctagaagaggaagaggaggccaggTTGGCTACActgatggaggaagaggagcagaagagtcagaggatgaaggagaagatggaggctctCAGTagagagatagcagctctttcagacacagtcagagccacagaggagcagctgagagctgaagatgtctcattcctgatcaactgcaaggctgcagtggaaagagtccagcagcgccccctgctggatgatccacagctgctctcaggagctctgatagacgaggccaaacacctgagcaacctgagcttcaacatctggaacaagatgaaggacatggtctcctacactcctgtgattctggacccaaacactgctcATCTAGATCTCATCCTGGCTGAAGATTTGACCAGTGTGAGAGTAGGTAAGAGACAGCTACTTCCTGATAATCCAGAGAGGCTTGGATCACTCTTCTCTGTCCTAGGCTCTGAGGGCTTTAACTCTGggactcacagctgggatgTTGAGGTTGGAGACAGTACAGTCTGGGCAAtgggtgtgttagcagagtctCTCCAGAGGAAGGGAAGCATACAGTCTGGATTATGGACAATAGGTTTCTCAAAAGGTAAATACTCAGCACGGTCACCACCAGCTCCACGCACTGATGTCATAGTGCAAAAGCAGCTCCAGAGGATcagagtgactctggactggaaCAGAGGAAAGCTTTCGTTCTCTGATGCGGATACTAacatacacaccttcacacacaccttTACTGAGAagatgtttccattcattttcactGCTAATAAAGTGAACATATCacctgtaaatgtgtgtgtgacagtggagCAGAGCAGTTAAGAGGATGATTATATTCATTCAGTTTTTCTTAAAGAGAAAAGTCACCGGatttaacattttaatctgCACATATCCTTCTGCTGTCTCAGTATTACAAAGATCTGTTTAGTTTTCTTTCAATAGTTTTTAATTTAGAATTGGCGAAAAACAATTTTTACTTGTCCGATTTactgctttgttctaacgccgctgggcgctctctctctcttcagtcactctccaccatataacatTACCGTGCTGTCGGGCGCTCGTTGAGGCTCCATCTGAAACTCTGCCATTTGgaccagctgtttgtaacataaaactaaaaaagattatggatattttcatttctaTAGGTTATAcctgactttaccagctgacttctctattggctgttggaacgaattccgaaattcgaatataatttgaatgtttaaaaaaatctactATTCGAATGCTAAGATTACTATTTGaatattgctttttttatgtgtgttttttttatatacaatcTTGCCTTTCTCGCCGCCTTGGCCTACAAcgcatgtgaaaataaaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798343.1 True 2191 mRNA 0.45 2 42617221 42630936

Neighbor

gene id symbol gene type direction distance location
LOC120557144 NA coding upstream 1639 42602515 ~ 42615582 (+)
LOC120557143 NA coding upstream 15928 42599087 ~ 42601293 (+)
LOC120557014 NA coding upstream 60783 42544075 ~ 42556438 (+)
sdc4 NA coding upstream 99163 42493073 ~ 42518058 (+)
LOC120556744 NA coding upstream 602667 42012948 ~ 42014554 (+)
manf manf,LOC102787989 coding downstream 14404 42645340 ~ 42651331 (+)
LOC120557146 NA coding downstream 781184 43412120 ~ 43442524 (+)
LOC120558241 NA coding downstream 879410 43510346 ~ 43510459 (+)
nicn1 nicn1,LOC103371623 coding downstream 937673 43568609 ~ 43579005 (+)
LOC120558025 LOC102289652,LOC101467503,LOC103368898 coding downstream 1264698 43895634 ~ 44107691 (+)
G45265 NA non-coding upstream 36948 42579464 ~ 42580273 (+)
G45254 NA non-coding upstream 133989 42468930 ~ 42483232 (+)
G45253 NA non-coding upstream 137395 42468235 ~ 42479826 (+)
G45248 NA non-coding upstream 187745 42421608 ~ 42429476 (+)
G45247 NA non-coding upstream 204794 42412205 ~ 42412427 (+)
G45271 NA non-coding downstream 10867 42641803 ~ 42644002 (+)
G45410 NA non-coding downstream 28443 42659379 ~ 42660437 (+)
G45411 NA non-coding downstream 32733 42663669 ~ 42663936 (+)
G45413 NA non-coding downstream 59491 42690427 ~ 43082600 (+)
G45412 NA non-coding downstream 65945 42696881 ~ 42795166 (+)
G45237 NA other upstream 315326 42278285 ~ 42301895 (+)
map1lc3a map1lc3a,LOC107551126 other upstream 705104 41905529 ~ 41912117 (+)
dynlrb1 dynlrb1,LOC106565026 other upstream 714590 41896995 ~ 41902631 (+)
G45186 NA other upstream 736854 41869730 ~ 41880367 (+)
LOC120557139 LOC106956008,LOC103153866,LOC103464266,LOC108411580,LOC102236494 other upstream 848908 41751003 ~ 41768313 (+)
rbm15b rbm15b,LOC102788268 other downstream 23852 42654788 ~ 42658388 (+)
G45557 NA other downstream 1207448 43838384 ~ 43838852 (+)
G45577 NA other downstream 1325891 43956827 ~ 43957173 (+)
G45635 NA other downstream 1729850 44360786 ~ 44468991 (+)
G45647 NA other downstream 1772967 44403903 ~ 44407449 (+)

Expression


Co-expression Network