gnrh2



Basic Information


Item Value
gene id gnrh2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 10264428 ~ 10266475 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039798346.1
GTAAAACTGGGAGATACCTTTAGCAGAGTGAGCTTCTGGCAGGACGTCAACGGACACCTGTAGTGATAACGTTGTGAGACTAAGGTGAGAATACCATGTGTGTGTCTCGACTGGTTTTGCTGCTTGGGCTGCTGCTATGTGTGGGGGCTCAGCTGTCCAACGCCCAGCACTGGTCCCATGGTTGGTACCCTGGAGGCAAGAGAGAGCTGGACTCTTTCGGCACGTCAGAGATTTCAGAGGAGATTAAGTTGTGTGAGGCAGGAGAATGCAGCTACTTGAGACCCCAGAGGAGGAGTATTCTGAGAAACATTATTTTGGATGCTTTAGCCAGAGAGCTCCAGAAGAAAAAGTGACAGCTTTCCACTCTACACTGCTTTTCTACCTGGTGGCCCTTCTTCTTCAGTGTCCTTTTCTTGACGTGAAACAGCTTTATGTTGATCATCTGACCTCTTCTATTTGTTATGTTTGTCAGTAAAGTTGTTTTCCAACATACATTGATTTTTCCGTGGCAAACAAATGTTGACATTGTAATGTCCCAAAATAAAGTATCTATTTTGATATga

Function


NR:

description
progonadoliberin-2

GO:

id name namespace
GO:0043010 camera-type eye development biological_process
GO:0007420 brain development biological_process
GO:0005576 extracellular region cellular_component
GO:0005183 gonadotropin hormone-releasing hormone activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039798346.1 True 563 mRNA 0.45 4 10264428 10266475

Neighbor


gene id symbol gene type direction distance location
ptpra ptpra coding upstream 7334 10232892 ~ 10257094 (+)
idh3b idh3b coding upstream 33749 10219726 ~ 10230679 (+)
drd5a drd5 coding upstream 219879 10040300 ~ 10044549 (+)
otop1 otop1 coding upstream 225554 10029586 ~ 10038874 (+)
tmem128 tmem128 coding upstream 234941 10016907 ~ 10029487 (+)
zmat1 NA coding downstream 340 10266815 ~ 10274959 (+)
cd8b NA coding downstream 11978 10278453 ~ 10282520 (+)
cd8a NA coding downstream 23595 10290070 ~ 10293048 (+)
pcsk1 pcsk1 coding downstream 74205 10340680 ~ 10355619 (+)
LOC120557177 LOC104957060 coding downstream 90257 10356732 ~ 10359945 (+)
G37186 NA non-coding upstream 4099 10257250 ~ 10260329 (+)
G37177 NA non-coding upstream 57671 10204789 ~ 10206757 (+)
G37163 NA non-coding upstream 212091 10052128 ~ 10052337 (+)
G37104 NA non-coding upstream 257572 9928035 ~ 10006856 (+)
G37112 NA non-coding upstream 301851 9957835 ~ 9962577 (+)
G37198 NA non-coding downstream 43592 10310067 ~ 10311163 (+)
G37215 ube2r2 non-coding downstream 135783 10402258 ~ 10434702 (+)
G37238 NA non-coding downstream 187010 10453485 ~ 10453731 (+)
G37337 NA non-coding downstream 260224 10526699 ~ 10526936 (+)
G37342 NA non-coding downstream 287557 10554032 ~ 10559006 (+)
prickle2b prickle2 other upstream 407772 9760233 ~ 9856656 (+)
G36744 NA other upstream 2035708 8227762 ~ 8228720 (+)
hcfc1a hcfc1,LOC102799381,LOC102206223 other upstream 2958085 7288907 ~ 7306343 (+)
G36458 LOC100304472,LOC107385856 other upstream 2992060 7209996 ~ 7272368 (+)
si:dkey-245f22.3 NA other upstream 3077214 7183199 ~ 7187214 (+)
G37197 NA other downstream 38712 10305187 ~ 10309996 (+)
glrx glrx other downstream 121433 10387908 ~ 10396187 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other downstream 730755 10997230 ~ 11012909 (+)
G37525 evc2 other downstream 1085603 11352078 ~ 11352387 (+)
LOC120557336 LOC103359259,LOC100704408,LOC101476502,LOC102796717,LOC102216118 other downstream 1118709 11385184 ~ 11394398 (+)

Expression



Co-expression Network