Gene
RNA
| Item | Value |
|---|---|
| gene id | npffl |
| gene name | npff |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053115.1 |
| NCBI id | CM020912.1 |
| chromosome length | 44863486 |
| location | 21997351 ~ 22000471 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| npff | Predicted to enable G protein-coupled receptor binding activity and neuropeptide hormone activity. Predicted to be involved in excitatory postsynaptic potential. Predicted to be located in extracellular region. Predicted to be active in several cellular components, including axon terminus; dendrite; and perikaryon. |
| description |
|---|
| LOW QUALITY PROTEIN: collagen alpha-1(II) chain-like |
| id | name | namespace |
|---|---|---|
| GO:0005184 | neuropeptide hormone activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039798384.1 | True | 1033 | mRNA | 0.47 | 3 | 21997351 | 22000471 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120557365 | NA | coding | upstream | 57577 | 21926042 ~ 21939774 (+) |
| b9d2 | b9d2 | coding | upstream | 109172 | 21887158 ~ 21888179 (+) |
| tamm41 | tamm41 | coding | upstream | 704159 | 21285085 ~ 21293192 (+) |
| LOC120557455 | timp4 | coding | upstream | 771330 | 21212932 ~ 21226021 (+) |
| iffo2b | iffo2,LOC102796214 | coding | upstream | 861333 | 21109025 ~ 21136018 (+) |
| LOC120558047 | ppp1r1a,LOC102206106,LOC102311133,LOC101483072 | coding | downstream | 6069 | 22006540 ~ 22043893 (+) |
| col2a1b | col2a1,LOC103356561,LOC107668081,LOC107585898 | coding | downstream | 143900 | 22144371 ~ 22192386 (+) |
| LOC120557368 | LOC103356557,LOC104967292 | coding | downstream | 220827 | 22221298 ~ 22252681 (+) |
| LOC120557376 | LOC104966918 | coding | downstream | 278111 | 22278582 ~ 22282983 (+) |
| tespa1 | NA | coding | downstream | 298305 | 22298776 ~ 22309762 (+) |
| G40840 | NA | non-coding | upstream | 64119 | 21911874 ~ 21933232 (+) |
| G40842 | alas1 | non-coding | upstream | 79540 | 21917243 ~ 21917811 (+) |
| G40804 | NA | non-coding | upstream | 219755 | 21713797 ~ 21777596 (+) |
| G40819 | NA | non-coding | upstream | 221934 | 21760799 ~ 21775417 (+) |
| G40755 | hrh1 | non-coding | upstream | 579018 | 21415729 ~ 21418333 (+) |
| G40904 | NA | non-coding | downstream | 201655 | 22202126 ~ 22202736 (+) |
| G40923 | NA | non-coding | downstream | 273603 | 22274074 ~ 22274301 (+) |
| LOC120557379 | NA | non-coding | downstream | 294483 | 22294954 ~ 22297812 (+) |
| G40948 | NA | non-coding | downstream | 388707 | 22389178 ~ 22425121 (+) |
| G41021 | NA | non-coding | downstream | 554146 | 22554617 ~ 22554845 (+) |
| itga7 | itga7 | other | upstream | 4740 | 21950376 ~ 21992611 (+) |
| vgll4b | vgll4 | other | upstream | 653640 | 21295102 ~ 21343711 (+) |
| G40353 | rassf1,LOC102778369 | other | upstream | 1848661 | 20148104 ~ 20148690 (+) |
| abhd14b | abhd14b | other | upstream | 2073802 | 19917889 ~ 19923549 (+) |
| cenps | LOC103362653,LOC103137101,LOC103464519 | other | upstream | 2138010 | 19851548 ~ 19859341 (+) |
| cbfa2t2 | cbfa2t2 | other | downstream | 1734477 | 23734948 ~ 23771932 (+) |
| znfx1 | NA | other | downstream | 1847576 | 23848047 ~ 23867512 (+) |
| bloc1s1 | bloc1s1,LOC102796612 | other | downstream | 2555054 | 24555525 ~ 24560318 (+) |
| slc12a5a | LOC103355988 | other | downstream | 3207685 | 25208156 ~ 25310553 (+) |
| slc16a1a | slc16a1,LOC102208676,LOC102781600 | other | downstream | 3681936 | 25682407 ~ 25690935 (+) |
