XLOC_005103


Basic Information

Item Value
gene id XLOC_005103
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 4143594 ~ 4169699 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011074
ttcaaaacacccagagaaaataataataaaatgttaagaaAAGTTAAAAGAAAGCATCTCAATAACCGTGCGCATATAAGCAAATTCAACATTTCTAATAAAatttcaagtaaaatattttagtatattaGTTGTTCATCACTGTCACTGTTCTGCTACCAGGACAATTATGTTTACGACATTTTTTCATTAAAGTCCCTATCTAATAATGACTAAATATATATCATTGGAAAGGTCTGTTACTTGTTTGTGTTATGTATGAATAATAGATTTAAACACAGATTACTGTCACCCTACAACCTGTGGGACCATTTACGGTTTTAAACCATAATATTGTAGCCTAAACAAAGCAAACATGACAACAAACTAATAAGCGTTTAAAAGTGTAAACTTTCTAGTTTTCATATCTGGTGACAGTTTTAGTTAGATATTACTGAGCAAAAGTTCTTTATTAATTTCCTACAAGGATACTATTCAGAgtcgtaaagcattactttgctacagcaatccactaTAGAGTCTAAATTCCAACCAAATACCATCAAACTGCCCATAGTACTTTAGAATTTAGGTTTACTTTACAAATACAGTCAAATGTATGAATAAAACATGGTTTTGTTCCTTAAAACATAGGGGGCGCCCTTGTATTGTCACCAATATAAACTGGATGTTATTTAGTGGTCATGTTTGGTATTGCGGTCCAACAAAATAATACTCACaggcttattattttttttgagacATTTCAAAATTGGAATATACAGTAATTTGATCAGATATTTAGCTTGATTTTGGTAAAACCATGTTTTAGTAtgtaaaatactaaaaaataaaagttttttttataaacaaaatggCACAACTTTTATTTGAGCATTTTTCCCTTCAGCTAAAATCTGACATCTGTCTTTAAAATTAGACCAAATTTAAATCTATGCACCACAGCATCTAAGATTGGCATTAATTTAAACTGAACATGTaatttttatatctgtttaaAAAGTGGGGCACCAGTTAAAGCAGAGaagtcaaactcaattcctggagggccgcagtcctgcacagtttagttccaaccctaattaaacacacctgatcaaaccaattgagtccttcaggcttgtttgaaacctacaggtaagtgtgttggagcagggttggaactaaactatgcaggactgcggccctccaggaattgagtttgacatccctcaGTTATAGGGTTAAATATGTGTGACTGTAAATCCCACAGAACTCAATCAGTATCCCATAACTGTTTGAGTGCACATTATTGTGGCGCTTCTTCTCCCTGTGCCTCCTCCATCATCTGCTTGTACTGGCTTTTGAAGAACCCAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011074 True 1356 lncRNA 0.34 2 4143594 4169699

Neighbor

gene id symbol gene type direction distance location
XLOC_005102 NA coding downstream 13774 4089737 ~ 4129820 (-)
XLOC_005101 aldoab coding downstream 73536 4052180 ~ 4070058 (-)
XLOC_005100 si:ch211-180a12.2 coding downstream 115515 3998764 ~ 4028079 (-)
XLOC_005099 si:ch211-136m16.8 coding downstream 150755 3981346 ~ 3992839 (-)
XLOC_005098 ppp4cb coding downstream 165252 3964351 ~ 3978342 (-)
XLOC_005104 si:dkey-32n7.7 coding upstream 1222 4170921 ~ 4185554 (-)
XLOC_005105 NA coding upstream 20323 4190022 ~ 4194304 (-)
XLOC_005106 si:dkey-32n7.8 coding upstream 26794 4196493 ~ 4199728 (-)
XLOC_005107 si:dkey-32n7.9 coding upstream 32127 4201826 ~ 4206869 (-)
XLOC_005108 vkorc1 coding upstream 47479 4217178 ~ 4220713 (-)
XLOC_005094 NA non-coding downstream 278360 3860464 ~ 3865234 (-)
XLOC_005092 NA non-coding downstream 357212 3782621 ~ 3786382 (-)
XLOC_005087 NA non-coding downstream 573513 3569747 ~ 3570081 (-)
XLOC_005086 NA non-coding downstream 599578 3519168 ~ 3544016 (-)
XLOC_005109 NA non-coding upstream 62158 4231857 ~ 4232505 (-)
XLOC_005111 NA non-coding upstream 105211 4274910 ~ 4287034 (-)
XLOC_005112 CU571308.1 non-coding upstream 116667 4286366 ~ 4286480 (-)
XLOC_005126 NA non-coding upstream 507487 4677186 ~ 4683350 (-)

Expression


Co-expression Network