LOC120557865 (LOC103376609,LOC103465378)


Basic Information

Item Value
gene id LOC120557865
gene name LOC103376609,LOC103465378
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 15676867 ~ 15709140 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798516.1
CAGTTGTCCTCACATATTAGGTTCCCCCGCCGTAAGAGGCAGAATTAGCCTCTGGAATCTTGTGCACTTGTTCCTTCGCTCCCAGGAAAGAGgtgaaaaaaacacagagaaacacagagagggaTTAAAAGGAATccgaaaagagaaagagactgaGAGGAAGATGAAGAAACTGAACATCAAGCTGCCTGCTGTTTGATGCAGCCACACTGTGGGCATGTGTCTGCCTGTGCCAAGCATTTCCCTCTCCACTCACCAGCTGACTGGAGTGGGGTCTGCGCTCATGTCGCTCAGTGCTACTTTATCGCTCAGTGCTACTTTATTTATCTCTTCACAGTAACGTGAGCttgaacttttatttattccactCAGAGAGGACCTCTGTCTGTATTACTTTATGCTGGCTGACACACTGACCTTTGGACTCTCTACTGGACAAAGGATTTGTATCACTTCAATCCTAGTGAAGAACATAGGCGACCAATGTGGGGCTCAGGAAGTGTAAACCGACCGGGCCCGGTCCCTGCCTTCCTCAGGAGCCCGTCTGTCATCCCAACCCCGCTGGACATGAAGCACTTCCTCCAGTTCCCCCTGGAGTCGCCGCACCCGGCCAGCATCGGCCTCTTCCACAACTTTAACACAATGGACCCCATCCAGAAGGCTGTGATGACGCACACCTTCGGTCCACCTATGGTGAAGACAAAGCGGCAAATCATCTCCTGCAACGTCTGTCAAATACGCTTCAACTCAGAGAGCCAGGCAGAAGCCCACTACAAGGGGAACCGCCATGCTCGGAGGGTGAAGGGGATCGAGACATCCAAGACAGCTCGTCTCCAAGATGGCGACAAGCAGCACCCTCCCCCTACTGTTTCGCCCTCCCCACCAGGCCCCTCGCCATCCAGCCCTGAGTCTGATCCTAATAAGCAGGATGACACCCAGTCCTGTCCCATCTCCACCAAGTTACCTTTGACCCCTACCCACCTTCCAACACCCACACTGAGCTCTGCAGATGCAGCGTGTCCCCTCCTGCCTTCTGTCAGCACACCTTTGCCATCCTCCCCCTCCCCGTCTGCCGCCCTGAGCACTCTCCATGCAGATCCAGCAGCAGCTGGTCCTCCTAACACCCCGTCCCCAGCACCCAGCCCTCCTTCAGGAGAGTCAGAGGAAGAGAAAGCCAAGAAGCTTCTCTACTGTTCCCTGTGCAAAGTTGCTGTTAATTCTCTCTCACAACTGGAGGCACATAACAAAGgTACCAAACATAAAACCATTCTGGAGGCTCGGAGTGGACTGGGACCCATTAAAGCGTACCCACGTCTGGGTCCTAAACCCAGCCCAGAGCAGGGAGGGGAGCTGTCTTCTGACCCCAACACTCAGGAACGCACCTTCCACTGTGAGATCTGCAACGTCAGAGTCAACTCAGAGCTGCAGCTTAAACAGCATATATCTAGCCGGAGGCATCGGGATGGAGTTGCAGGGAAACCCAATCCTCTGCTCAGTCGGCACAAGAAGCGCACAGACTTTATGgaacttCCAAAAACTCTGGGGGCTGGACTTTTACCAAATCCTCTAGCTGTTGCCGCAGCGATGGCAGCCGTGGCTTCCTCCAATCAGCTGGCACTGCGTCCTCCTTGCCCGACCTCCCACCATCATCCCCATCACCACCTCCTACAGGGAACACACCTCAGCCTGCTGAGACCCGCCCCGGGTCCCATCCGCACCACGCATGGGCCAATCCTCTTCAGTCCCTACTGACGGTGACAGAAGGAGGATGATTCAGGATGAAGCACACTGTGAAGTGGAGGCCTGCAACCATGTGCCATCAAGAGCCAAATCAGCTGGTGTGGCTCCAGCTGCTGTTtcattataataaaaacagtgaACATAAATATGACTCTTCATGGTGCATACTGTGGTTGCAGACCACTGCTGTTACATTAACAGGGAGAACTAGAGATGACTGACAAatctcattcatttaaaaaagactCCGTTTCCATCCACCCCAATTTCCCTTCATCACTAAACTATCTGCCAATCATCAAGTAGACTGCAGATAGTTTGAACAGGAACTTAGAAACAAGTTTCTATCAAGCATGGACTTCTTTGAGCATCTTCCAATCTGCAACTGACTAATTATCCATCTAACATATGATCCACTGTATCTGGCTCAAAACCCTACCtctcttgtgtttttaatgttcatCTCTGCAAGAATTCGTTACATATCCAAAGCATCAATGTTATCAAAAACAAGCCTGCTGGTTTAGATATAGTAGTTGCCTCAAATGTTAGCTGGTATCACAATGTAGCTGTCACAGTATAGTGGATTATACCACTGTAACGTTCTGTTTTTTGTGGCCTATAAAGAGGAAACGGTAACAGCAATTGCCATACCGTTTGTGCAGTTACTGGTAAACATttctctgtactgtatgtcttcaAATTGCACAGCTGGGCGTAATGGTCTATATTTACCTCTGGGTAAATTTTGTGGGACAAAATGAAACAGAAAGTCAAAGAGGAACAGCAAAGGGTAGAAATGACTTAATTATTATGTCTTAAAACTGCACTGATGTGTATGTCAACCCCATTTACAGTTTGGAAAAGACTTGTGAAGAAGTAATTGCAAATGGTGCACTCTTCAGCTATCAGTGTTTATTCTGTCTGTGTAAAATGCAGTAAGGTTGGAAAAAATAAGAATTGAACGGAAGGGAAAACCCATGCTGTTTCTTTAGTGAAGGTCAAGATGTAACCTCCTCCAGTTAAATAGTTCCCCTGATGATTCCCTAGATTCTCCCTGAATGGCCACTGATAAACCTGTGCATAAAATCTCACAAAGCACATAAGTAAAAGTCCATGGTGAAACGTCCCCATGTAAATGGCTTATTTAAAATAATGATCTATAATTTTTTTCATCTGCACGTCACAGAAAGGTTTCAGTGTCTTAATGAAATAGTTTCAACACTGTGAGCACAGCAGGACAATGGTTGATTCATGGCTTTAGTAGGAGGTCTTTGCATTACATGCACATTTGATTatacagacaacattttcacacAATCCCATGCAAGGAGTGCCGAACACAGTGGGTTGAAAGACACcagcaatatgttacagaaggAAAAGGACCACGTACACAGATGAGAAGTTGtatgcaaaacaaaaagcatTTTTGGTAGTATTATAGGCTTGCAGTGGGATAaaaaatgtttagtttgtcTGATCTGCCTCGTGTGCTCCGACCCTTCATGACCCCGAACTATCCCTGTGTCATGATGGCTTGTGAAACAACATTAAAGGAAAGCGTTAGGAAATGGAAACTGTAGCAATATTTTAAGCACTCCTGCTAACTTTTCTTGTTAActgcaataaaaagaaaatgtctacAAA
>XM_039798517.1
gacacacgctGTGGTGCAGAGGTTCCTCCACTGAAGCAGGGCTCCATCTCAGCTGTATTCTCTGGTGTTCCTGTGAATATATAACAGTGAATAAATTACAGGCTTCCTTGCAGTagtctgagtgtgtgttgtgttgcagtcGGGGCTGCTGCTGTGCTCCTCCTCTGGCAACAGCTGGCTGAGCAAGAGACGCGTGTCGAGATCTAAAGGAGAAGCATCTCATGTGGACGAAGGGAAAGGAAGAGACACAGAGTAGGGATGCAAAGTGAGGGTTGTAATGTTGGGACGTCTTTTTTTGTCCCACGTTGAGTTTTGAGAGCCAGAGAGGTGGACACTTACGGTTTGAGTCACATCAGTAGCTGATCAAGGGAGAGAGGAGTTGAGCGAGAAGATAACGTGGAAAGAGAAGTTGACAGTGGACGTGTACAGCATGATCTTGGGAAGTGTAAACCGACCGGGCCCGGTCCCTGCCTTCCTCAGGAGCCCGTCTGTCATCCCAACCCCGCTGGACATGAAGCACTTCCTCCAGTTCCCCCTGGAGTCGCCGCACCCGGCCAGCATCGGCCTCTTCCACAACTTTAACACAATGGACCCCATCCAGAAGGCTGTGATGACGCACACCTTCGGTCCACCTATGGTGAAGACAAAGCGGCAAATCATCTCCTGCAACGTCTGTCAAATACGCTTCAACTCAGAGAGCCAGGCAGAAGCCCACTACAAGGGGAACCGCCATGCTCGGAGGGTGAAGGGGATCGAGACATCCAAGACAGCTCGTCTCCAAGATGGCGACAAGCAGCACCCTCCCCCTACTGTTTCGCCCTCCCCACCAGGCCCCTCGCCATCCAGCCCTGAGTCTGATCCTAATAAGCAGGATGACACCCAGTCCTGTCCCATCTCCACCAAGTTACCTTTGACCCCTACCCACCTTCCAACACCCACACTGAGCTCTGCAGATGCAGCGTGTCCCCTCCTGCCTTCTGTCAGCACACCTTTGCCATCCTCCCCCTCCCCGTCTGCCGCCCTGAGCACTCTCCATGCAGATCCAGCAGCAGCTGGTCCTCCTAACACCCCGTCCCCAGCACCCAGCCCTCCTTCAGGAGAGTCAGAGGAAGAGAAAGCCAAGAAGCTTCTCTACTGTTCCCTGTGCAAAGTTGCTGTTAATTCTCTCTCACAACTGGAGGCACATAACAAAGgTACCAAACATAAAACCATTCTGGAGGCTCGGAGTGGACTGGGACCCATTAAAGCGTACCCACGTCTGGGTCCTAAACCCAGCCCAGAGCAGGGAGGGGAGCTGTCTTCTGACCCCAACACTCAGGAACGCACCTTCCACTGTGAGATCTGCAACGTCAGAGTCAACTCAGAGCTGCAGCTTAAACAGCATATATCTAGCCGGAGGCATCGGGATGGAGTTGCAGGGAAACCCAATCCTCTGCTCAGTCGGCACAAGAAGCGCACAGACTTTATGgaacttCCAAAAACTCTGGGGGCTGGACTTTTACCAAATCCTCTAGCTGTTGCCGCAGCGATGGCAGCCGTGGCTTCCTCCAATCAGCTGGCACTGCGTCCTCCTTGCCCGACCTCCCACCATCATCCCCATCACCACCTCCTACAGGGAACACACCTCAGCCTGCTGAGACCCGCCCCGGGTCCCATCCGCACCACGCATGGGCCAATCCTCTTCAGTCCCTACTGACGGTGACAGAAGGAGGATGATTCAGGATGAAGCACACTGTGAAGTGGAGGCCTGCAACCATGTGCCATCAAGAGCCAAATCAGCTGGTGTGGCTCCAGCTGCTGTTtcattataataaaaacagtgaACATAAATATGACTCTTCATGGTGCATACTGTGGTTGCAGACCACTGCTGTTACATTAACAGGGAGAACTAGAGATGACTGACAAatctcattcatttaaaaaagactCCGTTTCCATCCACCCCAATTTCCCTTCATCACTAAACTATCTGCCAATCATCAAGTAGACTGCAGATAGTTTGAACAGGAACTTAGAAACAAGTTTCTATCAAGCATGGACTTCTTTGAGCATCTTCCAATCTGCAACTGACTAATTATCCATCTAACATATGATCCACTGTATCTGGCTCAAAACCCTACCtctcttgtgtttttaatgttcatCTCTGCAAGAATTCGTTACATATCCAAAGCATCAATGTTATCAAAAACAAGCCTGCTGGTTTAGATATAGTAGTTGCCTCAAATGTTAGCTGGTATCACAATGTAGCTGTCACAGTATAGTGGATTATACCACTGTAACGTTCTGTTTTTTGTGGCCTATAAAGAGGAAACGGTAACAGCAATTGCCATACCGTTTGTGCAGTTACTGGTAAACATttctctgtactgtatgtcttcaAATTGCACAGCTGGGCGTAATGGTCTATATTTACCTCTGGGTAAATTTTGTGGGACAAAATGAAACAGAAAGTCAAAGAGGAACAGCAAAGGGTAGAAATGACTTAATTATTATGTCTTAAAACTGCACTGATGTGTATGTCAACCCCATTTACAGTTTGGAAAAGACTTGTGAAGAAGTAATTGCAAATGGTGCACTCTTCAGCTATCAGTGTTTATTCTGTCTGTGTAAAATGCAGTAAGGTTGGAAAAAATAAGAATTGAACGGAAGGGAAAACCCATGCTGTTTCTTTAGTGAAGGTCAAGATGTAACCTCCTCCAGTTAAATAGTTCCCCTGATGATTCCCTAGATTCTCCCTGAATGGCCACTGATAAACCTGTGCATAAAATCTCACAAAGCACATAAGTAAAAGTCCATGGTGAAACGTCCCCATGTAAATGGCTTATTTAAAATAATGATCTATAATTTTTTTCATCTGCACGTCACAGAAAGGTTTCAGTGTCTTAATGAAATAGTTTCAACACTGTGAGCACAGCAGGACAATGGTTGATTCATGGCTTTAGTAGGAGGTCTTTGCATTACATGCACATTTGATTatacagacaacattttcacacAATCCCATGCAAGGAGTGCCGAACACAGTGGGTTGAAAGACACcagcaatatgttacagaaggAAAAGGACCACGTACACAGATGAGAAGTTGtatgcaaaacaaaaagcatTTTTGGTAGTATTATAGGCTTGCAGTGGGATAaaaaatgtttagtttgtcTGATCTGCCTCGTGTGCTCCGACCCTTCATGACCCCGAACTATCCCTGTGTCATGATGGCTTGTGAAACAACATTAAAGGAAAGCGTTAGGAAATGGAAACTGTAGCAATATTTTAAGCACTCCTGCTAACTTTTCTTGTTAActgcaataaaaagaaaatgtctacAAA

Function

NR:

description
PREDICTED: zinc finger protein 385A-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798516.1 True 3390 mRNA 0.47 8 15676867 15709140
XM_039798517.1 False 3334 mRNA 0.47 8 15684082 15709140

Neighbor

gene id symbol gene type direction distance location
endou endou,LOC102787429 coding upstream 14871 15657531 ~ 15661996 (+)
smarcc2 smarcc2,LOC102786132 coding upstream 33312 15631352 ~ 15643555 (+)
LOC120556683 LOC102785850,LOC100702077,LOC102299981,LOC103376602,LOC102207065,LOC102237428 coding upstream 50822 15606682 ~ 15626045 (+)
LOC120556642 mettl7a,LOC102782606,LOC101484749,LOC103385978,LOC103147640 coding upstream 219903 15455607 ~ 15456964 (+)
LOC120556644 NA coding upstream 221377 15453193 ~ 15455490 (+)
LOC120556700 NA coding downstream 1076 15710216 ~ 15710890 (+)
LOC120556777 gpr84,LOC108235641 coding downstream 4109 15713249 ~ 15715495 (+)
tac3b NA coding downstream 27405 15736545 ~ 15741669 (+)
b4galnt1b b4galnt1,LOC104942127 coding downstream 63049 15772189 ~ 15789905 (+)
ankrd33ab LOC103367911 coding downstream 109483 15818623 ~ 15823565 (+)
G38832 NA non-coding upstream 32468 15644061 ~ 15644399 (+)
G38829 NA non-coding upstream 50027 15626311 ~ 15626840 (+)
G38788 espl1 non-coding upstream 133495 15542253 ~ 15543372 (+)
G38762 NA non-coding upstream 213415 15462301 ~ 15463452 (+)
G38738 scn8a,LOC106518053,LOC106572732,LOC103465359,LOC108440919 non-coding upstream 279360 15396729 ~ 15397507 (+)
G38858 NA non-coding downstream 9856 15718996 ~ 15722184 (+)
G38860 NA non-coding downstream 18839 15727979 ~ 15729400 (+)
G38885 LOC104942130 non-coding downstream 51652 15760792 ~ 15762315 (+)
G38948 NA non-coding downstream 205399 15914539 ~ 15914901 (+)
LOC120557201 NA non-coding downstream 210245 15919385 ~ 15921622 (+)
G38834 NA other upstream 29016 15645511 ~ 15647851 (+)
calcoco1b LOC104959845,LOC103376572 other upstream 802408 14865059 ~ 14874459 (+)
znf740a LOC107385642,LOC101469799,LOC102214350,LOC102304359,LOC103376569,LOC107082105,LOC100709046 other upstream 819798 14765297 ~ 14857069 (+)
G38517 NA other upstream 860431 14808352 ~ 14816436 (+)
cdk4 LOC107684003,LOC107701179 other upstream 919508 14740609 ~ 14757359 (+)
crbn crbn,LOC102793823 other downstream 214181 15923321 ~ 15937097 (+)
ccdc174 ccdc174 other downstream 256262 15965402 ~ 15974237 (+)
eefsec eefsec,LOC102787825 other downstream 340538 16049678 ~ 16060330 (+)
LOC120557902 rab7,rab7a,LOC102230535,LOC106583206,LOC105017191,LOC101061812 other downstream 439985 16149125 ~ 16158362 (+)
G39104 LOC103385912,LOC104930488,LOC103358732,LOC101079922 other downstream 724098 16433238 ~ 16435229 (+)

Expression


Co-expression Network