LOC120557886


Basic Information

Item Value
gene id LOC120557886
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 9950010 ~ 9957358 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798554.1
taatatccttTTCACAAGAGTCATCATGAACTCTCTGAACCAACAGTATGAGGAGAAGGTGCGTCCCTGCATTGACCTCATCGACTCTCTTCGCTCTCTGGGTGTAGATGACGACTTGTCGCTGCCAGCTATCGCCGTAATTGGAGACCAAAGTTCGGGGAAGAGCTCCGTGTTGGAGGCGCTGTCAGGGGTGGCTCTGCCAAGAGGAAGTGGCATTGTGACAAGATGTCCTCTCGAACTgaagatgaagagaaagaaagaaggagaggagtGGTACGGAAAGATAAGCTACCAGGACTGGGTGGAAGAGATAGATGACCCTGCTGATGTGGAGATAAAAATTCGAGAAGCTCAGGATGAAATGGCCGGGGAAGGGGCGGGGATCAGTGAGGAGCTCATCAGTCTGGAGATCGCCTCTCCTGATGTTCCAGACCTGACGCTCATTGACCTTCCCGGCATCGCCAGGGTGGCTGTAAAGGGACAACCAGAGAACATTGGAGACCAGATAAAGAGACTGATCCAGAAGTTCATCAAAAGACAAGAAACCATCAGCTTGGTGGTTGTTCCATGCAACGTGGACATAGCAACCACAGAGGCTTTGAAGATGGCACAGGAGGTGGATCCTGGTGGGGAGAGGACTCTGGGTATCTTGACCAAGCCCGACCTGGTGGACAAAGGCACAGAAGAGACAGTGGTTGCAACTGTCCATAATGAGGTCATCCCCCTGACGAAGGGCTACATGATTGTCCGGTGCAGGGGTCAGAAGGACATCACGGACAAGCTGTCCCTGACTGAAGcaatagaaagagagaaagccTTCTTTAAAAATCATGTGCAATTCCAGATCCTCTACGATGAAGGCTATGCCACTGTTCCTAAACTGGCAGAAAACCTCACCTTTGAGCTGGTGCATCATATCAAGAGATCGCTGCCTCAACTGGAAGAGCAGATAGAAAAGAAACTCAGGCAGACTCAGGCAGATCTCGACAAATATGGCAACGGACCCCCACCTGACGCAACTGAGAGACTCGGTTTCCTCATTGATAGAGTGACAGCATTTACATATGATGCTATCAGCCTCGCCGCAGGGGAGGAACTCAAATTTGGAGGCAGGCCTAATATCTTTGCCATACTCCGAAAAGAGTTTGCAGTATGGAAAGAGGTCATAGAGCGCTCTGGAACAACATTCAACTGGAATATTGAGAGAGAGGTGGCTCAGTATGAACGAAAGTACCGTGGAAGAGAACTGCCGGGGTTCATCAACTACAAGACCTTTGAGGGCATGGTCAAGGAGCAGATCAAACAGCTGGAAGGGCCTGCTGTCCTGAAACTCAAGGAAGTGGCAGAAATTGTGAAGAAAGAGTTGTTTGAGTTGGCACAGAGCAGCCTTGTTGGACTTCCTAACCTCATCAAAACAGCTCAGATGAAGATTGAAGCCATCAGAAAGGAGAGGGAGACTACAGCCGAGTCCATGCTGAGGACTCAGTTTAAGATGGAGTTGATTGTTTACACTCAGGACAGCACATACAGCAAGAAGTTAGGGAAGCGGAAGAGGGAAGATGATGTGACGGTCTTCAATGGTATAGCAGTGAAGACAAGCACCAGCAGCACTGACAGTGGGGCCACCCTGAAGGAGATGATTAAACACCTGAAATCCTATTACCAAATTGCTGGCCAGCGTCTGGCTGACCAGATCCCCCTGGTGATCCGCTACCAGATGTTGCAGGAGTCTGCCATCCAGCTGCAGAGGGAGATGCTGCAGATGCTTCAGGACAAGGAGAAAACCGAGGCCCTGCTTCAAGAGGACTCTGGCATAAAAACCAAGAGAATCAACCTTCAGAATCGCCTCAAGCGCCTGTCAAAGGCACGCATGCTGTTGACTGACTTCAGTATGAACATATACAACTTCAACACAACTCATTGCAATCCTTGAAACCAGATTGCTAATAGAAGAAGTTGCTGAATTAtcacattcttaaaaaaaaagttcctttgcagatttttttttcatgtttttgacATTAGTAATTCATTTTATTAAGTAAACTAAAATGTTTCATAAATGATTCCAGACTGTTACACCATATTCTCACTTTTCCATTCAATGTTATTGTTTCCTGAATGGCAtgccacatacatacataaggtccaaaacagagagagagagagagagagagagagagagagagagagagagagagagagaaaaaaaatatgtatgtttgttattgtggggttttttttgtaGGGTTTTCTCATTATGGGTTTTCTTGAGTAGTAGCTCCATTTTTGGCTTTCTTGAACTAACATCCTGCATGAAACCACAAAAGGTGCCTCTCAATCAGTCTGTCACAGACATGTTTGCACCGAGTACACCATTTACGTATTCAGCTTCACCGACCGTGTTGTCCATTGACGACCATTGACGTGTCCTAGTGAGCCATCATGCCAAGAGGGTTCAACATGCGGGATTTACGTACTCTTTTAAAGTATTTCCCCACaataactttatttaacatgatttaaCAACAGAGAATAGCATTAACGTAATATTAGGTAATAGCCCGACGGCCAATCCCaaacacatactatatattattCATTGGAGTGTGTGAGTTGTGAAAGAAACACTTAGCGAAGTTAGCTAATAAAGTTAAACGGTAGTGCTGgatgattaatcgaaaaataaTCGAAACTGAAATTCAGAGCCTTTAACCGACGTAATTTTACCAAGtcgattatttcggtcttttAATCCTATTAATATTTCCGTGCCGCCCACTGTGTGTTAATGTACTTTCCCCTTAAAACATATTACGGCCGCCGCGTGTGTAGTCACGTGACTCCGCCGGTTTACATTAAAACttaattaacttttttatttttatttcattgtaaaatCTACAGTTGTAGATTTAAGTTcagttgtttgaaatatttaataagCATTAATTgctatctgtgtgttttttccttATTTTAGAATCACAAAGATAGGATTATACACTCTTTCATTAGAAAAAATAACCCTGAACATATTTACAGTAGCCTAtaagaaaagatttttttttttttaataatcgtTCAATAATCGTAGTCAAGGTAACTTCTTCgattaattgtgattatgattttagccaaaatctTCCAGCCCTATTAAACAggttgattagttcagtgttaATGATGTCAGCTTTTAGCCCGTTGGACATGTGAGTCCAAAACTGTAAAAACGTGTCATAGATTGTAATGTAAACTTAACCTActcaaataaaactgaaaacata

Function

GO:

id name namespace
GO:0006184 obsolete GTP catabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K14754 MX; interferon-induced GTP-binding protein Mx

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798554.1 True 3287 mRNA 0.43 12 9950010 9957358

Neighbor

gene id symbol gene type direction distance location
LOC120557909 NA coding downstream 17552 9927026 ~ 9932458 (-)
LOC120557475 NA coding downstream 30067 9888179 ~ 9919943 (-)
slc2a9l1 NA coding downstream 72128 9866949 ~ 9877882 (-)
slc25a26 slc25a26 coding downstream 493831 9401094 ~ 9456179 (-)
kbtbd8 kbtbd8 coding downstream 649049 9292394 ~ 9300961 (-)
LOC120558233 NA coding upstream 473 9957831 ~ 9962543 (-)
LOC120558214 synpr,LOC104965753 coding upstream 9724 9967082 ~ 9995755 (-)
zbtb49 zbtb49 coding upstream 49972 10007330 ~ 10013719 (-)
slc2a9l2 slc2a9 coding upstream 144371 10101729 ~ 10201751 (-)
wdr1 wdr1,LOC102791765 coding upstream 247628 10204986 ~ 10216132 (-)
G37125 NA non-coding downstream 62594 9886362 ~ 9887416 (-)
G37093 psmd6 non-coding downstream 66979 9880039 ~ 9883031 (-)
G37073 NA non-coding downstream 216632 9731681 ~ 9733378 (-)
G37008 NA non-coding downstream 719054 9230470 ~ 9230956 (-)
G37007 NA non-coding downstream 719611 9230061 ~ 9230399 (-)
G37142 NA non-coding upstream 34331 9991689 ~ 10029489 (-)
G37145 lyar,LOC102793231 non-coding upstream 56369 10013727 ~ 10015053 (-)
G37146 NA non-coding upstream 58021 10015379 ~ 10016724 (-)
G37158 NA non-coding upstream 84889 10042247 ~ 10043822 (-)
G37159 NA non-coding upstream 86810 10044168 ~ 10044435 (-)
G37045 lrig1 other downstream 554440 9394739 ~ 9395570 (-)
LOC120558079 fam19a1,LOC101482978,LOC107385433,LOC108244096,LOC103386186,LOC106518519,LOC101163164,LOC102209545 other downstream 916343 8906439 ~ 9033667 (-)
mustn1b mustn1,LOC107385427 other downstream 1327188 8619087 ~ 8622822 (-)
LOC120557774 ucn2,LOC104952568,LOC108241195,LOC106518500,LOC100704776 other downstream 1535077 8412726 ~ 8414933 (-)
LOC120557337 LOC104966450 other downstream 2245565 7667664 ~ 7704445 (-)
LOC120556768 LOC104965754,LOC103359409,LOC102210396,LOC101479743,LOC102082439,LOC102300053 other upstream 41638 9998996 ~ 10006173 (-)
rhobtb3 glrx,rhobtb3,LOC102786935 other upstream 430559 10387917 ~ 10419906 (-)
tpgs2 tpgs2 other upstream 575168 10532526 ~ 10536353 (-)
fam219aa fam219a,LOC101484940,LOC100701621 other upstream 974877 10932235 ~ 10943639 (-)
LOC120557925 tmem233 other upstream 1025712 10983070 ~ 10988818 (-)

Expression


Co-expression Network