LOC120557909


Basic Information

Item Value
gene id LOC120557909
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 9927026 ~ 9932458 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798608.1
TCCTATCCGCAGTTGGCATCCGTCACGTCACACTTAAGTCACGGCATTCGAGCATCTGCAATTGTCGCTCCGCTCGGTTTCAGTGAATAGGACTTTTTTGCGGTTGAATTCCTAATTTAAACACAATTTCTTTCCAGATAACAATAAGTCATCACCATGAACACTCTGAACCAACAGTATGAGGAGAAGGTGCGTCCCTGCATCGACCTCATCGACTCTCTTCGCTCTCTGGGTGTAGAGAAGGACTTGGCGCTGCCAGCTATCGCCGTGATTGGAGACCAAAGCTCGGGGAAGAGCTCCGTGTTGGAGGCGCTGTCAGGGGTGGCTCTGCCAAGAGGAAGTGGCATTGTGACAAGATGTCCTCTCGAACTGAAGATGAAGCGAAGGCGAGAAGGAGAGGAGTGGTACGGAAAGATAAGCTACCAGGACTGTGAGAAAGAGATAGAAGACCCCGCAGATGTGGAGAAAAAGATTAGAGACGCTCAGGACGAAATGGCCGGGGTTGGGGTGGGGATCAGTGATGACCTCATCAGTCTGGAGATCGCCTCTCCTGATGTTCCAGACCTGACGCTCATTGACCTGCCCGGCATCGCCAGGGTGGCTGTAAAGGGACAACCAGAGAACATTGGAGACCAGATAAAGAGACTGATCCAGAAGTTCATCAAAAGACAAGAAACCATCAGCTTGGTGGTTGTTCCATGCAACGTGGACATAGCAACCACAGAGGCTTTGAAGATGGCACAGGAGGTGGATCCTGATGGGGAGAGGACTCTGGgtatCTTGACCAAGCCCGACCTGGTGGACAAAGGCACAGAAGAGACAGTGGTTGATATTGTCCATAACGAGGTCATCCACCTGAAGAAGGGCTACATGATCGTCCGGTGCAGGGGTCAGAAGGACATCACAGATAAGGTGTCTCTGACCGAAGcaatagaaagagagaaagccTTCTTCAACGATCATGTGCATTTTCAAACTCTCTACAATGACGGCCACGCTACTGTTCCTAAACTGGCTGAGAAACTCACGCTTGAGCTGGTGCATCACATTGAGAGATCTCTGCCTCGACTGGAAGAGCAGATAGAGGAGAAACTAGCACAGACTCAAGCAGAGCTGGAGAGATACGGCACTGGACCCCCAACGGATGCAGCTGAGAGACTCTTCTTCCTCATTGATAAAGTGACAGCTTTCACTCAGGATGCCATCAGTCTGACTACAGGAGAGGAACTCAAGTGTGGAGACCGGCTCAATGTCTTTTCTACACTCAGAAGAGAGTTTGGGAAGTGGAATGCCCACCTGGACCACTCCGGAGAAAAGTTTAACAAGAGGAttgagagagaggtggaggaaTATGAAGAGAAGTACCGTGGAAGAGAACTGCCGGGCTTCATCAACTACAAGACCTTTGAGATCATGGTGAAGGACCAGCTCAAAGAGCTGGAAGAACCCGCTGTCAAGAAACTCAAGGAAATAGGAGATGCTGTTCGGAAGGTGTTCATACAGCTGGCCATAAGTAGCTTCATTGGATTTCCTAACCTCATTAAAACAGCCAAGACAAAGATCGAAGCCATCAAGCAACAAAAAGAGTCCACTGCTGAAGCCATGCTGAGAACCCAGTTCAAGATGGAGCTGATTGTTTACTCTCAGGACAGGACATACAGCAGCAGTTTGAGTGACAggaaaaaagaggaggaagaggatgaggaggaaggcAGACGGAGTGGCAGGTCATTAGGCCTACTACATAAAGAAAGGAGTATTGTGTACAGCATGGATAATCATGCAACGCTCCAGGAGCTGATGTTGCACCTTAAATCATACTACAAAATTGCCGGCCAGCGTCTGGCTGACCAGATCCCGCTGGTGATCCGCTACCAGATGTTGCAGGAGTCTGCCATCCAGCTGCAGAGGGAGATGCTGCAGATGCTTCAGGATAGAGAGAATTTGGAGTTCTTGCTGAAGGAGGATTGTGACATCGGCAGCCAGAGGGCTGCTTTGCAGAGTCGCCTTAACCGCCTCATGAAGGCCCGCAGATACCTGGTGGAGTTCTAGAGGAGGCCTCCGAGGCCTAACAGCATGAGTTCACTTCACCTTGTTCATTTAGCAAATGCAGTACAATTTCGGTTGCAGGATTGCTATACtaaatgttttttacagtgttgaTTGTTAATGGACACATTTGCCTTAGATGTAACAGCTAAGTCAAAACAGGTCAGTATGTGGGGGGTCGTTTTAATTGTACTGTAATATGTATTCCAGTTAAAGGAGTTCTGCCTGTTATTTCACACGGCAAAAGCAGATCATAGGAGCACACTATATAGGTTCAATTCCTTCCAGGGAACTTATAGAATTGAAATAGGGAATAGAAAGATTTTATAGTCATTATAGTAAATACAACGCAATTAGGAGCGCTACTCCTGATCAGTGCAATACAAAACAACTGTCAACAAGACAACAACTTAAGCACACAACAGCCAACAACACAGCTCCAAACATACGtgttttaatattatatattaatattataacttATCTTCCCCAGAAAAGATTATTGACATTGTGCCAATATTTTCATGCTTTGTCATTGTTTCCTACTGATGGCTGGCCATGCACATAGTTAGTGTTTCTTAATCTATAATTACAGACTTAAACATTATTCAAATGCAtctttttgtatacattttttcaaatgtatttgtttaaataaagcaACGGTTCGACTTGAa

Function

GO:

id name namespace
GO:0006184 obsolete GTP catabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K14754 MX; interferon-induced GTP-binding protein Mx

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798608.1 True 2726 mRNA 0.46 12 9927026 9932458

Neighbor

gene id symbol gene type direction distance location
LOC120557475 NA coding downstream 7083 9888179 ~ 9919943 (-)
slc2a9l1 NA coding downstream 49144 9866949 ~ 9877882 (-)
slc25a26 slc25a26 coding downstream 470847 9401094 ~ 9456179 (-)
kbtbd8 kbtbd8 coding downstream 626065 9292394 ~ 9300961 (-)
LOC120558149 NA coding downstream 635680 9270935 ~ 9291346 (-)
LOC120557887 NA coding upstream 3397 9935855 ~ 9957372 (-)
LOC120557886 NA coding upstream 17552 9950010 ~ 9957358 (-)
LOC120558233 NA coding upstream 25373 9957831 ~ 9962543 (-)
LOC120558214 synpr,LOC104965753 coding upstream 34624 9967082 ~ 9995755 (-)
zbtb49 zbtb49 coding upstream 74872 10007330 ~ 10013719 (-)
G37125 NA non-coding downstream 39610 9886362 ~ 9887416 (-)
G37093 psmd6 non-coding downstream 43995 9880039 ~ 9883031 (-)
G37073 NA non-coding downstream 193648 9731681 ~ 9733378 (-)
G37008 NA non-coding downstream 696070 9230470 ~ 9230956 (-)
G37007 NA non-coding downstream 696627 9230061 ~ 9230399 (-)
G37142 NA non-coding upstream 59231 9991689 ~ 10029489 (-)
G37145 lyar,LOC102793231 non-coding upstream 81269 10013727 ~ 10015053 (-)
G37146 NA non-coding upstream 82921 10015379 ~ 10016724 (-)
G37158 NA non-coding upstream 109789 10042247 ~ 10043822 (-)
G37159 NA non-coding upstream 111710 10044168 ~ 10044435 (-)
G37045 lrig1 other downstream 531456 9394739 ~ 9395570 (-)
LOC120558079 fam19a1,LOC101482978,LOC107385433,LOC108244096,LOC103386186,LOC106518519,LOC101163164,LOC102209545 other downstream 893359 8906439 ~ 9033667 (-)
mustn1b mustn1,LOC107385427 other downstream 1304204 8619087 ~ 8622822 (-)
LOC120557774 ucn2,LOC104952568,LOC108241195,LOC106518500,LOC100704776 other downstream 1512093 8412726 ~ 8414933 (-)
LOC120557337 LOC104966450 other downstream 2222581 7667664 ~ 7704445 (-)
LOC120556768 LOC104965754,LOC103359409,LOC102210396,LOC101479743,LOC102082439,LOC102300053 other upstream 66538 9998996 ~ 10006173 (-)
rhobtb3 glrx,rhobtb3,LOC102786935 other upstream 455459 10387917 ~ 10419906 (-)
tpgs2 tpgs2 other upstream 600068 10532526 ~ 10536353 (-)
fam219aa fam219a,LOC101484940,LOC100701621 other upstream 999777 10932235 ~ 10943639 (-)
LOC120557925 tmem233 other upstream 1050612 10983070 ~ 10988818 (-)

Expression


Co-expression Network