npepl1 (npepl1)


Basic Information

Item Value
gene id npepl1
gene name npepl1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 14435641 ~ 14443805 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798670.1
CCTCCCGGCTACCGTCGCCGGTCCGGGCTGCACcaatataatacatccatgggctgCACCCGCTGCACCAGTGAATGACAGCAGTTCGTCCACTAACGTTACCGTCAGCTAGCTATCTCCCCGGCTAGTCACAAAGATGGCGAACGTGGTGCTGGAGTTTAAGGCTTCTGCCGGTGACTCCGAGCCACAGAGTCGCCCTGTCCTGATCATCGGACAGCAGACCAACCTGCACAAAGTCGCCTGGAGCCAAATCAAAGGAAAACTGCAGCCGGTCGTTAGCAAAGAGATCTGGCAGGCGGCTCTCGGTGCTTTGAACCCAAACCCTACGGACAGCTGCCCTCTGTACCTCAACCATGCTGCGGTGGCTGCCATTCCTTCACGGGTCAGCAGGCACAACAGCCAGTCTTCTGCCCACTTCGTGTCCCGTCTGGTCCGTTCCTGTCTGCCTGGAGGGAACAACCGCTGCATTGTGATGGTGTGTGAGCGTTCAGATGTGTTTGCGTCCTCCTGTGCCATCGCCAGGGCCTTCCCCATCTTCTCTCGCCGCTCCACTTCCTCACGCAGGGCTGAGAAGAAACATGTCACTGTGGAGTTTGTGATCGTCGGGCAAGAGAGCAGTCATCTGGATGCCGCAGAACTTGAGTGTCTCTCTAACGCTGCTCACGGAGTGAGGATGGCAGCTCGGATTGTGGACACACCATGCAATGAGATGAATACAGATCACTTCTTAGATGAGATCAAGGCTGTGGGAACTGAACTTGGAATAACTCCGGTTATCATTCGCGGAGAGGAGCTGAAACAAAGAGGATTTGGAGGCATTTATGGAGTTGGCAGGGCGGCAGAGCATCCTCCTGCATTAGCAGTCCTGAGCCACACACCAGAGGGTGCAACCCAAACCATTGCGTGGGTGGGAAAGGGCATTGTGTATGACACTGGTGGACTCAGCATCAAGGGAAAAacTACAATGCCAGGCATGAAGAGAGACTGTGGTGGAGCTGCTGCCATTTTAGGAGCTTTCAGAGCTACTATTAAACAGGGCTTTAAGGACAACCTCCATGCAGTGTTCTGCCTTGCAGAGAATGCAGTTGGACCCACGGCCACACGACCTGATGATATCCACACTCTCTACTCTGGAAaGACAGTGGAGATCAATAACACTGATGCAGAGGGCAGGCTGGTGCTGGCTGATGGAGTGGTGTACGCCAGCAAAGACCTGTCAGCGGATATTATTCTGGACATGGCCACACTGACTGGGGCACAGGGGATCTCCACAGGGAAGTTCCATGCAGCCGTGATGACCAACAGTGAGCAATGGGAGGGTGCATGTGTGCGCGCCGGCCGCAGCAGCGGAGATCTCGCTCACCCTCTGGTCTACTGCCCCGAGCTGCACTTCAACGAGTTCACCTCTGCCATGGCTGACATGAAAAACTCTGTGGCAGACCGGGAGAACGCCCAGAGCTCCTGTGCCGGCCTCTTCATTGGTTCCCACTTGGGCTTTGATTGGCCTGGTGTCTGGGTCCATATTGATATCGCCTCTCCTGTCCATTCTGGGGAGCGGGCCACAGGATTTGGCGTTGCTTTGCTATTGGCCCTGTTTGGTCAGGCATCAGAAGACTCCATGCTGAACCAAGTGTCTCCTCTGGGTGCCGCCACCAACATGTCTGAAGACCACATGGAGCGAGACTGCAAGAGACGAAGACTGGTGTAGAACACACACAGCGGTTTACTCCCCAACCCTGACTGCTCCGCTGCCACCACTCAACCAAAccgttga

Function

symbol description
npepl1 Predicted to enable manganese ion binding activity and metalloaminopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be located in cytoplasm. Is expressed in female organism. Orthologous to human NPEPL1 (aminopeptidase like 1).

NR:

description
probable aminopeptidase NPEPL1

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0005737 cytoplasm cellular_component
GO:0004177 aminopeptidase activity molecular_function
GO:0030145 manganese ion binding molecular_function
GO:0008235 metalloexopeptidase activity molecular_function

KEGG:

id description
K09611 NPEPL1; probable aminopeptidase NPEPL1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798670.1 True 1774 mRNA 0.55 12 14435641 14443805

Neighbor

gene id symbol gene type direction distance location
ankrd52b ankrd52,LOC103359366 coding upstream 619 14416436 ~ 14435022 (+)
si:ch211-159e12.5 NA coding upstream 90036 14339648 ~ 14345605 (+)
stx16 stx16,LOC102781320 coding upstream 101946 14324934 ~ 14333695 (+)
nab2 nab2 coding upstream 158211 14266964 ~ 14277430 (+)
inpp1 inpp1 coding upstream 177356 14253007 ~ 14258285 (+)
ctsz ctsz coding downstream 8389 14452194 ~ 14455976 (+)
si:ch1073-456m8.1 LOC102799563 coding downstream 130328 14574133 ~ 14583735 (+)
olfml3b olfml3 coding downstream 155218 14599023 ~ 14602910 (+)
pmela pmel,LOC103359383,LOC103375503 coding downstream 175712 14619517 ~ 14626326 (+)
prph prph,LOC103375502 coding downstream 188073 14631878 ~ 14637440 (+)
G38276 NA non-coding upstream 127200 14305760 ~ 14308441 (+)
G38274 NA non-coding upstream 141484 14293933 ~ 14294157 (+)
G38247 NA non-coding upstream 240224 14193103 ~ 14195417 (+)
G38206 NA non-coding upstream 390082 14045357 ~ 14045559 (+)
G38164 NA non-coding upstream 432454 14002962 ~ 14003187 (+)
G38317 kdm5b,LOC108235655 non-coding downstream 21169 14464974 ~ 14466684 (+)
G38331 NA non-coding downstream 49098 14492903 ~ 14494740 (+)
G38441 cdk2 non-coding downstream 164034 14607839 ~ 14610422 (+)
G38449 NA non-coding downstream 199127 14642932 ~ 14690625 (+)
G38496 NA non-coding downstream 266921 14710726 ~ 14712134 (+)
LOC120557952 mettl21b other upstream 97881 14335160 ~ 14337760 (+)
LOC120557956 nrn1,LOC104931831,LOC102785075,LOC100692329,LOC102195708,LOC102307414 other upstream 202104 14227097 ~ 14233537 (+)
tfeb tfeb other upstream 907322 13456929 ~ 13528319 (+)
mdm4 mdm4 other upstream 1063269 13319684 ~ 13372372 (+)
per3 per3 other upstream 1106309 13305415 ~ 13329332 (+)
cdk4 LOC107684003,LOC107701179 other downstream 296804 14740609 ~ 14757359 (+)
znf740a LOC107385642,LOC101469799,LOC102214350,LOC102304359,LOC103376569,LOC107082105,LOC100709046 other downstream 321492 14765297 ~ 14857069 (+)
G38517 NA other downstream 364547 14808352 ~ 14816436 (+)
calcoco1b LOC104959845,LOC103376572 other downstream 421254 14865059 ~ 14874459 (+)
G38834 NA other downstream 1201706 15645511 ~ 15647851 (+)

Expression


Co-expression Network