LOC120557990 (LOC103362904,LOC104928138)


Basic Information

Item Value
gene id LOC120557990
gene name LOC103362904,LOC104928138
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 16917821 ~ 16962625 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798758.1
GCCTCCTGCAGGATTCCGTTCACAGTCACAGGCGCCGGCCAGCACTCACGCTGTGAGCAGGTAGAGGTGACCAAGAGTATTCTCCAGCGTCTACTTGTTGCTTGGCCCAGGAGGGGTGGACAGAGCGGACTGGACAGGACAGGGTGATGTCTGTGTAAAACAGTAACATGTCGCCACATAGCTCATGATGCCTCCATCACCTCCCAGCAGAGCACCGGAGATCTGCACGGACATAAGTTTTTACGCGTATTCTCTTGAAATGTTGCTTATCTCCGTCCTTAAGGTGAATCGGGAGAAACGGAAACCCACAAGAAGAAGCGAGGAGGGACCCTGATGCGGTCATCAACAGGACTATGTCTTCTTAATCTGACGGACTGTATCTTCCAGTCTTTTCAAGTGACCGATTGACTTGAGTGAAGATGATCAAAGAGGGTTCTCGGTCGGCCACCTCGCTGCCACCGGATGCCATGGACATCATCCGCAGCAAGAACAACACCCGCCGTGTGAGAATCAATGTCGGGGGCCTTCTTCACGAAGTCTTGTGGAGGACGCTGGACAGGCTGCCCCGCACAAGACTGGGCAAACTGAGAGACTGCAACACCCACGACTCTATCATCGAGATATGCGACGACTACAGCTTGGACAGCAACGAGTACTTTTTCGACAGACACCCCGGCGCTTTCACCTCCATTCTGAACTTCTACCGCACCGGAAAGTTGCACATGATGGAGGAAATGTGCGCCCTGTCGTTCAGTCAAGAGCTGGACTTCTGGGGCATCGACGAGATCTACCTGGAGTCCTGCTGCCAGGCCAGGTACCACCAGAAAAAGGAACAGATGAATGAAGAGCTGAAAAGAGAGGCCGAGAACATGAGGGACAGGGGTGGAGAGGAGTTTACAACCACATGTTGTTCCgagaagagaaagaaactcTGGGACCTCTTGGAGAAGCCAAGCTCATCATTTGCTGCTAAGaTCCTGGCAATTATCTCCATCCTCTTCATTGTGTTGTCTACCATTGCCTTGTCTCTGAACACCCTTCCAGAGCTGCAGGACACAGATGAGTTTGGTCATTCCACAGACAACCCACAGCTGGCCCATGTGGAAGCTGTGTGTATTGCCTGGTTTACCATGGAGTACCTACTTCGCTTCCTCTCTTCCCCCAACAAGTGGAAGTTCTTTAAGGGTCCTCTGAATATCATCGACCTGCTGGCCATCCTGCCCTACTACGTCACCATCTTCCTGACAGAATCCAACAAGAGTGTGCTGCAATTTCAAAACGTGCGCCGCGTGGTTCAGATTTTCCGAATCATGCGGATCTTGCGTATTTTGAAGCTGGCTCGTCACTCCAcaggtcttcagtctctgggttTCACTCTTAGGAGGAGCTACAATGAGCTGGGCCTGCTTATCCTTTTCTTGGCCATGGGCATCATGATATTCTCCAGTCTGGTGTTCTTTGCTGAAAAGGATGAAGAGGACACCAAGTTCAAAAGCATCCCAGCTTCCTTCTGGTGGGCTACCATTACTATGACCACAGTAGGCTATGGAGATATTTACCCCAAAACTCTACTGGGAAAGATAGTTGGAGGTTTGTGCTGCATCGCCGGAGTACTGGTGATAGCCCTGCCTATCCCCATCATCGTGAATAACTTCTCTGAGTTCTACAAAGAGCAAAAGAGGCAGGAGAAAGCCATTAAAAGAAGGGAGGCTCTGGAGAGGGCTAAGAGAAATGGTAGCATTGTTTCTATGAACACAAAAGACGCCTTTGGCCGCAGTATAGAGCTCATGGATATAATGGTGGAAAATACTGAGCAAAAGATGGAGAAGGTGCATGATAATCATGTGTCTCCTAGTCGGCAAAAAGGGACACTCAAACTCAAGTCACATATGAGCCCCAGCAGCCCCACCAAAAACCTTGAATCCAACAACCAAGAGCAGGCCAAGCCCTCAAGCAGCCCTCAGCATCTCAGTGCACAGAAACTGGAGGAGATGTACAACAAGATGGCCAAGGCCCAGTCACAACCCGACATCAACAGCAAGGAAAAAGGGCCACCATCCAAAGCAGTTGGGCAGGGATCTGAATTAGAGATGGGAAGTATCCCCACTGAAGCCATCTCAAGCAAAGCAGAGGCAGTTGCAGACATAAGGAGCATGTCCAGCATTGACAGCTTCATCAGCTGCGCCACTGACTTACCTGAGAGCTCTCGCTTTTCCCACAGCCCCATCAGCAGCATGCTAGGGAGAGTCAGTACCAACCCCAGCCTGGAGCCCACCCTGGAGAATGAGCATGAAGGATCCCAGGACACCACTACACCCCTGATAGGACAAGGCACAAAGCCTGGCCTGCATTCTGACAGCCCCAGGAGTCTGCCCTTCAACAAACCGCACAAAAGCCGCTCACTAAAGGTCAACTTCAGAGCTGAGGAGGATTCAGGGACAGGGGCTCTCTCAGACAGCTCATCAGTCCGGAGCCCCGAGGTGTCCGTCTACACAACTGCCAGCAGCAGGACACCCAGCAAGAGCCCGGATAATTTAATGCCTAGCAGCCTCTTCACATTCCACGATGCGTCCATCAATACATTCATTGATGCTGATACAGATGAGGAGGAGCATCTGTATGATGGTTCAGGCACCAAACCATCCCAAAGACTTCTGGAAAGAACCAGGCCCAAGTTTGCCCCTCACTCCAGCTTCCAGCAAGGGGCCAACCACATGGAGGGCCTACAGAGGAAGCTGGGAAACAGCACACTGCCGCTAGAAGGGCAAGAGAACCATGTGGCTCAGGAACTACAGCCATTTCAGGGAGAGAAGAGTCACTCTAATGCTTAAAGTGGGAGTGACCACGGAGGAAACatacaggagaggaggaagcaGAAAGGAAAATGTAAGAAGCACAGTGAACTCAGCAAAACTGAACTTCccaaaaatatgaaagacaatgAAAACATTTGCAGGAACATTTgaagaattacaacacaaaatgCTTCTCCCATGAAAATAGATGCAGACAATGGGAAATAAGTTTGTGTTTTGCTCTCAAACCTTTTCCTACCAAGGACTCCTGAATTAATTAGTTTAGCAGAGGATTCTGATCTAAGAGGTTTTAAAAGTGTCTGATAGTTTTTACTATTTATACATGTGTTTTAGCCCAGATCATCATATAATAATCACCGCCTAGTTTTAAGAGTATAGGATATCATTTTTATAAGCAAAAACCTATTTTTCTGACATCCCCTGGGTACTACTTTAAAGCCACTATAGCAAACAATCCAATCAGTAGCAACCCACAGAGGGCATTGAAACATGGCACTGCAAAATGGGAAACTCATTCACTTGAGGTATTTCAAATAACTACGTTGTTGTGTGAAACGAGAACTTACATTTGTCTTCAAGTTATTGGTTACACAGTGTATAAATATGGCATTACAAAGGCAACAGTGTGTTGTGAAAATGTATAGTTTGCTTCCTTTAACTTCCTTCCTCAAAACTGGCCTTAGTTTATGTTGTCACccatgtttaatgtttgtatgagtgagaaagagagacatataCGGACAGACAGTACATACAAATAAacagtactgtatattcatTGTTATGTAGCGTTCTTGATCTCTTAAGTGTGAACTTGAGGAGCATCAAGTATTTCCATCTGAGTTTAGTGTCATGCACGTCCATATTTTTTTACtgcacagaaaatatttagacAACACAAAGACACTGTGAGGCTGCATCCATCGATTTCCTTCTTGTTCCAATGGTGCCCGACTGCTGGCAAGGGAGAGCACCTTAACGTgatcattattttcattataaacagaaaaaaaatactctttATTCTTGTTTGTAGTGGTGTTATCAGAATTTTAACCTGCCGTAAATCTAAATGTCTTTATGTGTTATTTCAAAACATTCTCAAAGGTGTCTCGAAGGAGTCATCATACCTATTGTAGCTGATAACTTCATATAAAATGACAGGTCTGATGAGCATCACTAGCTGGAAAGACAGCACTGAAAATCACTGAGATTTTTTATGTTGAACCTCCACTTTTGGAATGTGACTATTGTACATGTATAACTACAAAAGTAgaatattacacacacaaagaaacaacaTTAAATTTACAAGGTACAGAATgaaaataatttatatttttaagaaATTTTCTAAAAGAATTGACTCTTAGACAAATATATTGTGCTAATTTCGTAGTTTTGCATTTCGATATATGTACTGCATTATTTTGATGGAGTTGCATTTGTTAGACAATATACTGTAGTAGatgaatttgtattgtttgctACTGTCTCCCCGTAAATGTCTGTCCCTCTATCCTTATTTGCAATGTGAAGAACCAAAGAATTGTTCCTTCTGATATCTTGTACAGATGATGGTAAGTTTTACTGTTTTATCTCAAAAATGTAAGAAATGTAAGCATTCCTTTTCTAAATCTGACATACTTCAGGGAGCCATACTTGCTCATGCGGTACAAACATGTAAGTAGACGAGAGGACTGCCCTTTGAAGAAGAAAGCTGTTGACAGGGAATGAAAAGAATAGACGGAAAATGAAGAGGGAACACGGCACTTTAGTTCACACCCATTTCAAAAGCTAAAATTGGATTATTTACACACTGTGGATCTTGGCAAGTGGTTCGCTTCCAGAGATCCAAAACATTACACTCACATGAGGTCATGTGACATCTCTTACAAACACAAAGCCACCTCGCAGCAGTTCAACCAAATATCCTGCATCCTGCACCTGACTCCAAACATATGCtctttgttacattacacatGCAAGCATGTTTTTAAAGCATTATtaactttacaaaaaaaacatgcaagcaAGCTTTAAAGCCTGTTTTAGGTAGTTTTTAGTTAGTAGTGAGTCTAGAAATAGAAGTATTTATGCTGTATGGTTGTTTGCAATCATTAGACATTATATGAGTAAGATATTTCCGTGCCTTTGCTTTTAACAGACGCCTACCCCGCACACTGAATCTGTCGCTGTCTACTGATGCCCGAATGACAATTAAACAAACAGTAcagcaaataaacacacagagaactGGGTCATCAAGCTGTCAGACTGCTGTATTAGATACCCACCCCCTCCCTCTAATGTATTTCCTGTACACTTAAATGCACCAAACATTTACATGATGAAGGCCCAATCCACAAAAACAAACGTGCAGACTCACTCAGTGAAGTGAACGACCACTGTTTCCATGGTGATGGTTGAGATGACTCAATGGCTCGCATTTGATAAAAGCATGTAGACTAATTTGTAGAGACACATTGCAAATATACACAGTTTACATTCTGTTCATGCATTCACTCAATCATTCATTCATCTCTTCTTCCCTGCTCACCTGTGGCTTCAGTCTGGTGAAGCCTCAATTATCGATAAAATGATGTAAACAGAAAGCTGGATTGTGGGCCTTTAAATCAGACTGCCACACCATCCCTTTACTTCACTTTTTCATAGAAACATTGACACATCTCAGCAAATTACAAAAGAACAGGTAGAGCATGACCACAGCTACGTAAGGTGCTGTTGCTATGGTGTATGCTTACTTCAGCTACCGACCCCCACGGTGGGAGTGAGTGTGAAATGTGAATGGAATAGGAACAAGaggtgtgtgacagagagagctgtgcagccTGATTACAACTGACATCACTAATGATGGCTGTAGCACTCTGCTCCTTCACCTCATGCCCAACTTCACATCATCATTCAAGACATAATCTGTGAGCTTTCTCAGCTCTTTTATTGTCCTGTCTTTTAAAGACAGGACAATCACTATCATCCTCTCATTCAGAAAGTTATGCAGCTAGATTATGCACACTCATGCAGTCATGTGGGTTTTTCCATTACAAGCACCAGCCCCGTGCTTGCGTCTTTTGTGCAGAATGACAGTGCAGAAATGGCATCCTTTTGAGGATGTGTTCATTTCTGTGATTCTATTATTATCATCCTGGGCATGCAAAGGGAGGGTCTGGGCCAGAAGGGAAGGCTCAGTTACAGCAATGTCTTTTGTCTGACGATGTCATAGAGGAACAAACTTTGTAACAGAGAACATACAGTAAATACTCACTGATCTTTGGTATTGAGCCTCTCATCATCGTGGACAACTCCTTCCTCTGTTGAATTAATGTTAACAATGTCCTTATTGCCCTGTCTTTattattttcctgttttctgaactGCACTTTATTGATTATTCTGTAttaaatcctcttctgctttctCGTAACCATGCAACTAAAAATGTCAACATACAAACGGTCAAATACAATTTCCAAAGCACAAAGTATAATGTCAATAAGTATCAGAATTTTCTTTAAGCACAATACGCCACACTAGAGGTTCAAGCCAAATGCAGACACATCATTTAATTTTCAGAATCTTCCCCCTTATTTAGGGAATGAATCGCCTCTGTTCAACTCACACAGGTCTGTATGCCGCCCTTACAGTGTGTGgggaaatgtttgttttgtaagaTTTCATACTTTGTACCAGTTGACTTTATAGAATATTATCTTTGTGGTTTCCTGTTGTTCAACGCATGTAGCTCAATTAAACTTTAACCCACATAACTTGTAAATATCATCTTATAAGCTATAGGAAAATGTCTATGATCAGCAATTTGGAAGCAATTGCCTCCTTTTACTgactaatgcttaataaaagACAATAATCCAGTGTTGGTGCTGCACTCTATTAACGGAATTGTGTTttcatgaaaaacagtgaattCACACAAGAGGAATGTAATGCATGGAGAGCGAACACTGAGATTGGGCAAGGGCTGAGCTTGTGGTTTGTGGAAGGAAACTGCATATCTTATACAACAGCACCCTCcagtgttacattacattacatgtcatttagctgacgcttttatccaaagcgacttacaattgctatatatgtcagaggtcgcatgccaactaggggttaagtgtcttgctcagggacacattggtctgtattcaatgaaaaatatactgtacatattaaaATACTCTACAAAATCA

Function

NR:

description
PREDICTED: potassium voltage-gated channel subfamily B member 1-like

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0051260 protein homooligomerization biological_process
GO:0008076 voltage-gated potassium channel complex cellular_component
GO:0005249 voltage-gated potassium channel activity molecular_function

KEGG:

id description
K04885 KCNB1, KV2.1; potassium voltage-gated channel Shab-related subfamily B member 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798758.1 True 7048 mRNA 0.43 3 16917821 16962625

Neighbor

gene id symbol gene type direction distance location
LOC120557149 LOC104950923,LOC103362905 coding upstream 1258 16907842 ~ 16916563 (+)
thumpd3 thumpd3,LOC102800238 coding upstream 10997 16897070 ~ 16906824 (+)
cav3 cav3,LOC107093348 coding upstream 176309 16738036 ~ 16741512 (+)
LOC120557897 LOC104966248,LOC103368476,LOC102798401,LOC101469442,LOC105924440,LOC106583184 coding upstream 182515 16733386 ~ 16735306 (+)
gpr61l LOC104930496,LOC103368477,LOC104957521,LOC100694581 coding upstream 187805 16724159 ~ 16730016 (+)
wdr77 wdr77,LOC102777617 coding downstream 38549 17001174 ~ 17004437 (+)
LOC120558021 LOC103362897,LOC103385872,LOC104928123,LOC104950934 coding downstream 56325 17018950 ~ 17020740 (+)
irf6 irf6 coding downstream 65084 17027709 ~ 17032694 (+)
eps8l3a NA coding downstream 72094 17034719 ~ 17042813 (+)
LOC120558072 LOC103362892,LOC104950939 coding downstream 135072 17097697 ~ 17102777 (+)
G39210 NA non-coding upstream 94565 16818746 ~ 16823256 (+)
G39197 NA non-coding upstream 131770 16785831 ~ 16786051 (+)
G39196 NA non-coding upstream 132756 16784748 ~ 16785065 (+)
G39195 NA non-coding upstream 135203 16782411 ~ 16782618 (+)
G39143 NA non-coding upstream 338099 16579085 ~ 16579722 (+)
G39302 LOC102778475,LOC101478284,LOC100692415 non-coding downstream 85310 17047935 ~ 17048365 (+)
G39304 LOC103362894 non-coding downstream 87172 17049797 ~ 17053951 (+)
G39308 NA non-coding downstream 118041 17080666 ~ 17082576 (+)
G39358 strip1 non-coding downstream 195278 17157903 ~ 17159236 (+)
G39427 celsr2 non-coding downstream 325814 17288439 ~ 17289516 (+)
G39116 NA other upstream 374241 16517536 ~ 16543580 (+)
G39104 LOC103385912,LOC104930488,LOC103358732,LOC101079922 other upstream 482592 16433238 ~ 16435229 (+)
LOC120557902 rab7,rab7a,LOC102230535,LOC106583206,LOC105017191,LOC101061812 other upstream 759459 16149125 ~ 16158362 (+)
eefsec eefsec,LOC102787825 other upstream 857491 16049678 ~ 16060330 (+)
ccdc174 ccdc174 other upstream 943584 15965402 ~ 15974237 (+)
LOC120556687 LOC103362900,LOC104950925,LOC102306361,LOC100693144,LOC103362894 other downstream 1992 16964617 ~ 17046696 (+)
G39351 NA other downstream 149488 17112113 ~ 17119890 (+)
srsf3b srsf3,LOC104948713,LOC103465186,LOC102226051,LOC103150674 other downstream 230526 17193151 ~ 17198217 (+)
LOC120557637 minos1,LOC103357934 other downstream 408858 17371483 ~ 17377560 (+)
G39581 LOC104949003,LOC103357913 other downstream 645305 17607930 ~ 17609216 (+)

Expression


Co-expression Network