LOC120557997 (eif4e3,LOC103355441)



Basic Information


Item Value
gene id LOC120557997
gene name eif4e3,LOC103355441
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 6118632 ~ 6132639 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039798765.1
GTGACGTTTGTCTTCTGCCCAGTGACGCAGAGACGTCACCAGTCGGTAGGCGGAAAAgcggtagtgtgtgtgtttcgtatCTGGAGATAAAGACTAGCCGGGTGCTTTTATTAAGGAGATACACAAGGAGATATAAAAAGGTTAGCTTTGTGCCTGCTGAAATGGCGGTTCCGGCTGGTCAGCCAGATCTACAGATGGACAGGGGCGCCCTGAGCGGCCAGACGGTTTCCTCTGAAAACAACATTGACATCGACGAGAAAGAGTTGGAAAATATCACAAAGAAACACCGAGAAGACGAGACGACAACGCTGCCTCTGCACTCACCTTGGACGTTTTGGCTGGACAGGTCATTACCGGGCACTACGGCTGCAGAATGTGAATCCAATCTGAAGAAGATCTACACCGTGCAAAGTGTTCAGatgTTCTGGAGTGTATACAACAACATCCCCCCAGCCACAGCCCTGCCTTTGAGATGTAGCTATCACTTAATGCGCGGAGAGCGGAGGCCTCTGTGGGAGGAAGAAAGCAATGCAAAAGGAGGAGTATGGAAGATGAAAATACCAAAAGAAAGCACTTCTGCAGTTTGGAAAGAATTGTTACTTGCCACTATTGGGGAACAGTTTGCAGATTACTGTGCCTCAGACGATGAGGTCGTTGGTGTCAGTGTTAGCGTTCGGGATCGGGAAGATGTCGTACAAGTCTGGAATAGTGATGCATCTCTTGCTAACGAAGCAAATATCTTGGGAAAAGTCTATGAGCTCCTCCCATCCATATCTTTTAAAGCTGTTTTTTATAAGTCTCACATGGAACATCATGCCTTTGAAGGAGGACGCTCAAGACATTAAATTATTGTAatgcacttctttttttttcttttttttttattttaaacctgAACTCTGTACCTGCCTTTAAGGCGCTGTCCACAACCTAATCAAGGatattattttgcattcaaCAATGAAATGTtatcaatatatttttataacttGTTATGACTGATGCCTTGTTTCATTTTGAGGTGGGTCCTAAAGCTCTGAACTCTCGAGAGAATGTATATCCAACATAAATCTCATCCGGAGTTCATTagttcatgttggttttgactTCCTCCTTTtgctgaactgaactgaactgtccTGGTCCTGTTCTCTGCACAGCCTATGGACCTCACAATGTATTCCTGGTATAGAAGTAGCTGCTACAGAACTAGTGTTTTAACTGTTTATGTAGGGTATCTTAATTCATGTCATGTTTATGTTTAATTAAGTCTACTTAGTCAGTGCCAAGGCACTTCTCTGCTGTTTAAGAAGTTTGCATCCCAATGGTGTTTTATACAGCTGGAGTTTTTCCACTTTTGAGGATGAATTGAATGTCCCATTTGGTTTTTTGAAACTTCATCAAGCGTACATCAAATTTAAATCAGGGTAACACTTGGACATATTGCACATGAATACCTATTTTGATCACAGCGTCCCTTAGTTATAAAGCCATCATAGGGAAGAAGACTCTGCTCTAGACTACGTCCAcactaatacatttttaaaaccgTGTTTTTAAAAAACGAAAACGACCTCCGTCCAGATGTTTTACCACCGTTTCGGAAATAATCTCCGTTATAAAATGCAGAATTTAACTGCGCAACAGCTGCAAGCTTAGCCAACAAGGTCAGCAGCGGCTGTAAGTAGTTATCCATGTTGAATTACCCACTGGTAGTCAAGGTTGacgttgtttgttttcttccagaaaAGGGTGACGTGATAGGGGCGTAGCGAATCAGGGAAGGATGTGTGGATGTAGTCTTAGTTAAAGAGCAAAAGCCATCTTGAAAGATGCCTCTTATGAATGTTCTTAACTGCACCGCATTTGACATTTCTTTCGATACCCCATGTTGAAAGTAGCCCCTCTGCTTTCCTATATGGGGTCACAGACTGTATACTGCACATTGTTTGTGACATTTTTATACAATATGTCAAATTTTATCgttatgaaaaagtcaaatatgacAGATTTGGCGAGTTTCAATTCAGTCATTGAGTCAAGTTATACTGCTGCTTCAAAGAAAAGTACACTTTAAACCAGAAGTTACACTGACCTCACCTATTTGATCATGTCCATAATGAGAAATAGCATcactattaataaaaaaaatagaaaaacattttgtaCCAGCTCCTTTTACAAATCTGGGTCATTTTTGTGAGACTTCATCACCCAAACAGTTATGCGATTGCAGTGTAGGCTACAATAAACTGAATGCTTCTGGTATTATTGTATATCAAACCATTTTTATTGTGCAGCTTCGGGCTGGTCGATACGTTAGTTATGAGGGGACAATATTTCCTTTTTGCAGTGATATggacaaagtaaataaaatgtaaatgaaaatactA

Function


symbol description
eif4e3 Predicted to enable RNA 7-methylguanosine cap binding activity and translation initiation factor activity. Predicted to act upstream of or within regulation of translation and translational initiation. Predicted to be part of eukaryotic translation initiation factor 4F complex and mRNA cap binding activity complex. Orthologous to human EIF4E3 (eukaryotic translation initiation factor 4E family member 3).

NR:

description
PREDICTED: eukaryotic translation initiation factor 4E type 3

GO:

id name namespace
GO:0006413 translational initiation biological_process
GO:0005737 cytoplasm cellular_component
GO:0003743 translation initiation factor activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039798765.1 True 2393 mRNA 0.41 7 6118632 6132639

Neighbor


gene id symbol gene type direction distance location
shq1 shq1 coding upstream 104678 5957271 ~ 6013954 (+)
pdzrn3b pdzrn3 coding upstream 213469 5793732 ~ 5905163 (+)
cntn3b cntn3,LOC100696343,LOC102785363 coding upstream 453579 5610010 ~ 5665053 (+)
LOC120556975 LOC103365933,LOC100695288,LOC105934533 coding upstream 1075155 4956351 ~ 5043477 (+)
rpn2 rpn2,LOC102784465 coding upstream 1214942 4893449 ~ 4903690 (+)
eevs LOC104922196,LOC103355445,LOC104966975,LOC105934428 coding downstream 282327 6414966 ~ 6426594 (+)
LOC120556937 LOC103355436 coding downstream 334177 6466816 ~ 6521161 (+)
trnt1 trnt1 coding downstream 396812 6529451 ~ 6537424 (+)
si:dkey-178o16.4 LOC103355435,LOC104921970,LOC104952562 coding downstream 404902 6537541 ~ 6541431 (+)
lrrn1 lrrn1 coding downstream 472731 6605370 ~ 6619215 (+)
G36201 gpr27,LOC103355443,LOC102784210 non-coding upstream 4319 6111677 ~ 6114313 (+)
G36175 NA non-coding upstream 62406 6055244 ~ 6056226 (+)
G36170 NA non-coding upstream 97509 6020853 ~ 6021123 (+)
G36145 NA non-coding upstream 423686 5694393 ~ 5694946 (+)
G36114 NA non-coding upstream 678023 5438157 ~ 5440609 (+)
G36231 mitfa,mitf-a,LOC100534525 non-coding downstream 296868 6429507 ~ 6433109 (+)
G36288 NA non-coding downstream 410828 6543467 ~ 6544074 (+)
G36299 NA non-coding downstream 441507 6574146 ~ 6574347 (+)
LOC120556885 NA non-coding downstream 446341 6578980 ~ 6581303 (+)
G36353 NA non-coding downstream 640097 6772736 ~ 6773170 (+)
prok2 prok2,LOC103355444 other upstream 11480 6104613 ~ 6107152 (+)
rybpb rybp other upstream 63416 6035072 ~ 6055216 (+)
G36156 LOC103374102 other upstream 194232 5920924 ~ 5924400 (+)
cdk5rap1 cdk5rap1 other upstream 1184468 4911699 ~ 4934164 (+)
G35921 NA other upstream 1533157 4487535 ~ 4585475 (+)
foxp1b foxp1 other downstream 6824 6139463 ~ 6306143 (+)
setmar LOC100698471 other downstream 502641 6635280 ~ 6638523 (+)
si:dkey-245f22.3 NA other downstream 1050560 7183199 ~ 7187214 (+)
G36458 LOC100304472,LOC107385856 other downstream 1077357 7209996 ~ 7272368 (+)
hcfc1a hcfc1,LOC102799381,LOC102206223 other downstream 1156268 7288907 ~ 7306343 (+)

Expression



Co-expression Network