yod1


Basic Information

Item Value
gene id yod1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 27388769 ~ 27393967 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798805.1
AGAACGTCATGGCGTCGTACCGACGTAGACTGACGTAGACAGACGTTCTACACATCAGTCTCTCACTGCTGAATGTTTATTGTTtgaggtagctaacgttagagccGCAGTCAACAGCAGGTAGGATGTTGCGGCTTCGCTGTAAGACCAAAAATGGGAGCCACATAATGCAGGGCTTAACTCATCAGTCCTGTGTGCAAGAGCTAAAGAGCAAGGTGGAGGAGCTGACTGGTATCCCCTGTGATGTGCAGAAAATTATGGTTGGTTATCCACCCTCCAGCCTTGATCTTAAAAATGGAGATGCTCACCTCAAAGATTACCCCATCAAATCCGGAGACACACTCATTgttgaggaagaaaaaaacaagccaAAGCCTCGTCAGGATCACCCCACTGTGACTAAAGCACCACGCCTGGAACCCTCACCCGTGCTGGCGCGTCGAGTGGTCCCAGCTGACAACTCCTGCCTCTTCACCAGTGTGTATTATGTGGTGGAAGGCGGTGTGTATGACCCTGCTTGTGCCCCTGAGATGCGAGGCCTCATCGCCCAGATCGTGTCAAGTGATCCCACAGCTTACTCGGAAGCGGTGCTGGGAAAGACCAATGAGGAGTACTGCTCTTGGATAAAACGTGACGACACCTGGGGGGGAGCCATCGAGGTGTCTATCCTGTCCAAGTTTTACAAATGTGAGATCTGTGTGGTGGACACTCAGACAGTCCGAGTGGATCGGTTTGGGGAGGATGCTGGCTACCACAAACGCGTGCTGCTCATCTACGACGGCATCCACTACGACCCCCTGCAGAAAGAAACACCCGGCTCTGACGCACCGCCCCATACTATCTTCTCCACCACTGACGACGTAATCCTGGCGCAGGCCCTCGAGCTGGCAGATGAGGCTCGACGCAAGCGGCAATTCACGGACGTTAACCGTTTTGCGTTGCGCTGCATGGTGTGCCAGACGGGCCTGGTGGGACAAAAGGAAGCTCGCGAGCATGCCAAGGAGACAGGCCACACCAATTTTGGCGAAGTGTGAACACGGTTTTGTCTTTTCTCCCTCCTCACAAATACAACTATTCTGTCAATCTGCTTGTGTGATCCTCTACCTCACATTGTCCAGCAACATCTGTGGAGAATCTGCAGACACTGTGTGCAGCCTCTAACCTGTTCAGTATTACTTTCTAACTGCTGTCAGTTCTCAAAGTCAGAAATGCTACTGCAGCGCTCCGATGTCTTCAAACCGTCATTTTAGTCTGTTTAGAGAtggtttcaaatgtgtttttaactgGGTCAAGGAAAATATGCAAACCATTCTTAGGATTTGTCTTCTTCTCTTTCGGTAACTCGATGGCTGGGTTGTATTGATAACAAACCAAATAGTGGCTGATGTGTTGTCAATTAGAAAATGCATCAAATAGCCATTATTTACCTGTGACTGACTAAAGGTATACTTGATAAAACCCTGCCATTTGGCTCTAGAATAAGTTTAAAACAACCACTGAGAATTCTTTGCACTATGATGTGATCCTATTCACTGTTGTCTTAAGCGCGGCACACACAGTATGACTGTTATTCATCATGTTGGTTATGTagcatgttttttatttctcttccaATACTAAAAACTGATAATTAAGTCAATGTGGATGTCCAAATTGTTCAGCACAGCacaggtgggctgtgttaatgCTAAGCTGGATTAATTGTTATACATGACATCTCTTTGATTTTACTGAGCGGTGGCCATTCAGATTGattggattttttatttttcccgtGCTTTTTTTGATGTTGCAACATGGTTGATCAGTGATCTCATTTTAGATTTGACAGAAGAAATAATGGTGCTGAAAACAAAATCTGTAGCTCTTAGTTTTTTCTTCATGGGTACGGCAGTTTTTCAGGAGTGTAATTTTTAATTCTAGTGTGTAATTTTCAAATGTCATCATGctgaaatcttttaaaaaattgtgtttgttttacatggctgcttatttaaaaaaacaacactttaagCGGGATGAGGTGTTTGAGCGTTGTATTTCAGAACACGAGTTATGATGAGAGGGGAGTGTAGTGACTAGAAATCTGAAACGAGTGAGTGCAAGACATGCCGTATGAGATACATCCTGCTCACttaatgcatttacagtactgTTTAGGTACAGTCCATACATTGTGTTTAGCTAAGCAGCAATGCTGTGAATGCTTATTCAGCATTAACCATTTACCTTTGCAATTTTAATTTCAGTTGACATTTGCAGCCTAAAACTATAAGTTAAAGGCCATTTTGGTTTAACATGTAGTGCATGTTGGCCATAAAAAGCACCATTCTGTTTCACTGTATGTTTTGCACAACTGGAGCATgttctcacattttagaaatcaTCTCTGTACTAATTCCTTTAATACTATACTCACTGCCGAGAAGAATGAAGCACACACTTGTTTATGTTGAACCACAGCTcaaaaatgttacatttgcCATTAAGATAGTTGTAGGATTAGCTTTTTTTCCTTAAAGCCCAGTTTATTGTGGCTTCATGTTGTGCAGAACCATTATTTctacttcacatacagtatatatggtgACAATACTGGTACCGAGTTGTTGCCAAAAAAATGGAGTTTGACAGTGAACGACTTTGATTGGGGCTTCTTTCTTTTGTTGATTTGTCTTTTAGACTCCGAGATTAACAAAAGGCATAAATGTCATTTGAATGTGAATTACTATGATTTCCCCCTTCATTTATTACCTATTAGGTagtttattttaacattgattATGGATTAGTCAGCTTGCATAAAAGTAAAACTATGAAATggctttgttgtattttatatttaccAAGTTCTCATGACTCTTTAAGGACAATAACAATGAATGTTGCACACAAAGCACTACAGAATAACTGGAtttacttgatttttttttttctctttcagtgtTGTGTCACAATTAAAAGTTATAGCCGATGA

Function

NR:

description
PREDICTED: ubiquitin thioesterase OTU1

GO: NA

KEGG:

id description
K13719 OTU1, YOD1; ubiquitin thioesterase OTU1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798805.1 True 2977 mRNA 0.42 3 27388769 27393967

Neighbor

gene id symbol gene type direction distance location
pfkfb2b pfkfb2,LOC105939516 coding upstream 10448 27364700 ~ 27378321 (+)
phtf1 phtf1 coding upstream 24160 27348913 ~ 27364609 (+)
LOC120558010 LOC103355483,LOC108231584 coding upstream 40669 27346995 ~ 27348100 (+)
im:7151449 NA coding upstream 219062 27158737 ~ 27169707 (+)
LOC120556972 magi3,LOC103355560,LOC100702300,LOC101472626,LOC102212608 coding upstream 235623 27011398 ~ 27153146 (+)
zgc:158258 NA coding downstream 1769 27395736 ~ 27403397 (+)
alpl alpl coding downstream 127888 27521855 ~ 27542067 (+)
nmur3 LOC102295936,LOC100702544,LOC102199352,LOC101463611 coding downstream 216144 27610111 ~ 27618161 (+)
LOC120556812 NA coding downstream 481575 27875542 ~ 27876611 (+)
lrrc38b LOC108231699,LOC101063821 coding downstream 487126 27881093 ~ 27900596 (+)
G42031 NA non-coding upstream 45919 27342599 ~ 27342850 (+)
G42020 NA non-coding upstream 161159 27225283 ~ 27227610 (+)
LOC120558213 NA non-coding upstream 179436 27194172 ~ 27209333 (+)
G41927 NA non-coding upstream 450024 26938477 ~ 26938745 (+)
G41865 tcp11 non-coding upstream 679192 26707269 ~ 26709577 (+)
G42061 NA non-coding downstream 25820 27419787 ~ 27432384 (+)
G42074 NA non-coding downstream 46513 27440480 ~ 27442339 (+)
G42075 NA non-coding downstream 48441 27442408 ~ 27446281 (+)
G42085 NA non-coding downstream 66554 27460521 ~ 27461759 (+)
G42147 NA non-coding downstream 259154 27653121 ~ 27653448 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 624032 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 839970 26542507 ~ 26548799 (+)
G41825 NA other upstream 1115454 26268602 ~ 26273315 (+)
LOC120558088 LOC104941431 other upstream 1481031 25904769 ~ 25907738 (+)
LOC120558082 kcna10,LOC104941363 other upstream 1515850 25767092 ~ 25872919 (+)
ephb2b LOC104917933,LOC103376520 other downstream 276996 27670963 ~ 27823260 (+)
G42449 NA other downstream 1846446 29240413 ~ 29242253 (+)
ergic3 ergic3,LOC102788871 other downstream 2715568 30109535 ~ 30135834 (+)
G43045 NA other downstream 5066165 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 5076828 32470795 ~ 32471605 (+)

Expression


Co-expression Network