LOC120558018


Basic Information

Item Value
gene id LOC120558018
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 2735859 ~ 2745280 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798837.1
ctgtaatcttggctgcaAATGTTAATTTCTCCCAAATTTCAggtcacattcctgctggaacatgttgtgtaatatttggttaAGTAAcctttatttgtgatttttgACGCTGTTGCATAGTGTGGTGGAagaacagggtgtgtgtgtgtgtgtgtgtgtgtctcatgtttCCCTGTGCTACAGTGTTATCTGAGCCACATTTCCTTTCCACCACAAGAAGCTGATCCTGCTCAGCATCAGGCACAACAAAGGAGATGCGTTGCCTGCTGACGACCCAGAGCCAGAACGGCTACCGAGAGCAGATCCAGAAGGAGATGTTGACTCGTTTGGCCTGGAAAAGCCGCTACGCCAACCTCTACTCGTGTTACAATCCCCGAAACAACAGCACAGAGTCGACACAGCTGCCCCGTCTGCCCGCTGACCCCCGGGCTGTCTTGCCACCTGTTACCAGGACAATCAAGGAGCAGAGCAatcttccccctcctcctcctcctcttcgtccTCCTGTGCTATCTCTGGAGGGGGAGGGGCGTCTCAATGTGCCCCCCCTGATGAGGCCAGTTTCTCCTCAGACCAGACGTGCTCTCTATCAGGACTCCTCTCACCATGGTAAAGGGCGGAGTCTGTACTTACAGAGACGTGGCCACATCAGACCTGAGGAGAAGTTTGACTTTCCTCTGCTCTCGTCCTGGGAGTACGGGTGGAGGCTGGGTGACTACACTGTGGATTACAGAACGCCATCCCGCGCCAAGTCTTCAGTCGTGAAGAACACGTTCTACGCCAGGAACGGTGTGTTCTGCAGCCCGTCAGCCACCGACACACTGGGCTGAAGTTCAGCCTTCATACACCAGAGGTCGCTCTTTAATGAGAGTGTAGAACTTCAAACAGGCTTTTATTTGATTAACACCGTTGATGTTTGTTTTAATACACACCCTGATTTAGTTTtagggtgctttcacacctgtagtttggTAGACTCGGTGCAATTTGGGGGTGAAGTTGCAACatggttacatttttcatttggttcagTTTGTGTATACACTGCACTTTATCAAACACACCAAGCATTGTAGATAAATTCCTCAGGGTCAAAAAGGCTGCTGGtctattggacagaatatctgaGTAAAACTGGCCGACACTTGTGGTTTCAGAAATAATAATACGTTATAATAAATTTATAACGTCTTGGGATTTCTGGTTTTactttagtgtttgtaatatttgACAGGCAGCGAGTGAAGGAGAGGGCGGccctgatgagagagagagatgatgttGTCATACAGATGACCAGCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798837.1 True 1303 mRNA 0.48 5 2735859 2745280

Neighbor

gene id symbol gene type direction distance location
LOC120558182 flnb coding upstream 1325 2640388 ~ 2734534 (+)
ahcy ahcy coding upstream 769343 1938583 ~ 1966516 (+)
LOC120558247 NA coding upstream 779409 1956316 ~ 1956450 (+)
LOC120558248 NA coding upstream 783375 1952350 ~ 1952484 (+)
LOC120558249 NA coding upstream 788432 1947337 ~ 1947427 (+)
LOC120557397 NA coding downstream 64978 2810258 ~ 2818790 (+)
LOC120557395 NA coding downstream 81609 2826889 ~ 2836128 (+)
ccdc51 NA coding downstream 118256 2863536 ~ 2882763 (+)
osgn1 LOC102208111,LOC100711663,LOC103370650,LOC101475239 coding downstream 171516 2916796 ~ 2949567 (+)
mtss1 LOC102789651,LOC101478388 coding downstream 218847 2964127 ~ 3073270 (+)
G35380 NA non-coding upstream 15158 2720074 ~ 2720701 (+)
G35379 NA non-coding upstream 29404 2705600 ~ 2706455 (+)
G35377 NA non-coding upstream 71758 2628787 ~ 2664101 (+)
G35372 NA non-coding upstream 87073 2536528 ~ 2648786 (+)
G35374 NA non-coding upstream 113119 2621875 ~ 2622740 (+)
G35541 NA non-coding downstream 13924 2759204 ~ 2759496 (+)
G35544 NA non-coding downstream 21527 2766807 ~ 2774590 (+)
G35548 NA non-coding downstream 38672 2783952 ~ 2786339 (+)
G35572 NA non-coding downstream 122647 2867927 ~ 2884120 (+)
G35576 NA non-coding downstream 163917 2909197 ~ 2983784 (+)
G35364 NA other upstream 147697 2583514 ~ 2588162 (+)
G35359 NA other upstream 241268 2487994 ~ 2494591 (+)
LOC120556786 NA other upstream 347885 2385615 ~ 2387974 (+)
asip1 NA other upstream 683716 2024224 ~ 2052143 (+)
G35295 LOC107380983,LOC102290002,LOC108241855,LOC108250349,LOC106456447,LOC101470105,LOC102800009,LOC102214284,LOC101480046,LOC102215411,LOC102307835 other upstream 898204 1811624 ~ 1837655 (+)
G35534 NA other downstream 1940 2747220 ~ 2747772 (+)
G35578 NA other downstream 185644 2930924 ~ 3017125 (+)
G35618 NA other downstream 498951 3244231 ~ 3358820 (+)
epha8 epha8,LOC102791453 other downstream 708320 3453600 ~ 3589612 (+)
G35791 LOC101072424,LOC104921976 other downstream 1203554 3948834 ~ 3950128 (+)

Expression


Co-expression Network