LOC120558056


Basic Information

Item Value
gene id LOC120558056
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 28366910 ~ 28369124 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798897.1
gtgtgtattagtgtcGGGAAAACATTTGGCCTCATTCTGTTTCGCCACAAGAACTCTGCCAGGTGAGGAAAGGAGAAGCTATCTCTGTACTTTCACTGAGCCAGATGTCTCCAATGCAGAGGATGTAGTTAAGGCCCTCAAGCCAATGAAAGATGCTACTACACTTATATCAGAGGAGAACAGCCCCACAGTGTGTTTGATTGCCCCACTGCAAGCTCAACTCTGCCAGGAAACGACGGGCAACATTACAGAATCATCAATTATCCTCGAGTTAAAGCAGGTCATCAACGAGGACCTCAGTAAAAGGTACACCTCTGACCTAGAGAGAAGCACACTTCGTTCAGCTTCTGCTCTAGACCCGAGATTCAAGGGATTGCCTTTCCTTTCTGAGGAGGATATAGAGGAGACATGTGGAAGAGTTGTTGCTGAGGCTGCATCACTTGAGCCACAGGTAAGAGTCGAAGATGACGAAAGCCAGCCCAACACAGAGGACACCCACACCACAGAGGAGCAGAGCCAAAGCCCCTCCCCTCCCAATAGAAGAGCTGCCCCCTCTTTGCAAAACCCCTCTCCTCCCAAGAGAGAAGCACCATCCTCTTTGCCATGCCCCTCTCCTCATAAGACACGAGCTCCATGCTCTTTGTTGGAGAATCTGCTGGGAATACCTTCGCTGGTAACACAGCTCAGCAGCCCATCTCTGCCTATGCTAAAGCTGAGGAGGAGGTTAGCAAGTTCCGTGGTGCTCCACTAATTCCTCTCTCTGAGGACCCTCTCAGCTggtggagaaagaaagaggtgaTGTAACTCCTGCTTTCCAAGTTGAGCATGCGATACTTCTGTATTCTGGCCACCAGTGTCTCTGCAGAAAGAGTCTACTGCAAGGGATATCGTGACTGCCCAACGGAGTCGACTAGCTCCTGTTCTTACACAATAACTTGCATATTCCATGAGCATCCACCAGTTATTAACTGGAAATTAAGCACCTTTACTGTTACTGTTTGTTTACTAATATGTTGCACTTCCATAGTACCCAGCCATGATTTAATTGTAGCACTGTTATGCTATTTCTGTTTACTTTTCTACCTCATATTGCACAGTGTTTTTGTATGAGAGCTGAATTCCAAGCCATACTTTTTGCACAGTGTTGAAATGCAAGAGGCATAACACTGTGTAGcataaagttgttgtttttctgtctcaGGTATTTGCTGCTTATTACCAATAACAGGAGGATTTTGTGTTTGAAGTCTTATATAATTGACTAAGAGCAGCTTTACATAGAAAAAGAttagacagaaaagaaaaattcaTGTGTTTATGTTTTACATACTATTGTGTTGAAATGCAACCTGCATTGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798897.1 True 1359 mRNA 0.45 3 28366910 28369124

Neighbor

gene id symbol gene type direction distance location
c4h1orf158 NA coding upstream 400516 27964559 ~ 27966394 (+)
aadacl4 NA coding upstream 402816 27960725 ~ 27964094 (+)
lrrc38b LOC108231699,LOC101063821 coding upstream 466314 27881093 ~ 27900596 (+)
LOC120556812 NA coding upstream 490299 27875542 ~ 27876611 (+)
nmur3 LOC102295936,LOC100702544,LOC102199352,LOC101463611 coding upstream 748749 27610111 ~ 27618161 (+)
rnf207a rnf207 coding downstream 243416 28612540 ~ 28640689 (+)
LOC120557435 NA coding downstream 351787 28720911 ~ 28722206 (+)
LOC120557430 LOC104950703 coding downstream 468126 28837250 ~ 28855733 (+)
pnp4a LOC103367714,LOC101478937,LOC106510859 coding downstream 515452 28884576 ~ 28891360 (+)
rem1 rem1 coding downstream 535874 28904998 ~ 28915648 (+)
G42211 NA non-coding upstream 151731 28214748 ~ 28215179 (+)
G42147 NA non-coding upstream 713462 27653121 ~ 27653448 (+)
G42085 NA non-coding upstream 905151 27460521 ~ 27461759 (+)
G42075 NA non-coding upstream 920629 27442408 ~ 27446281 (+)
G42074 NA non-coding upstream 924571 27440480 ~ 27442339 (+)
G42230 chd5,LOC102784485 non-coding downstream 191670 28560794 ~ 28561264 (+)
G42249 rpl22,LOC104952292 non-coding downstream 241093 28610217 ~ 28611502 (+)
LOC120557449 NA non-coding downstream 461484 28830608 ~ 28836904 (+)
G42345 NA non-coding downstream 511720 28880844 ~ 28881314 (+)
G42355 NA non-coding downstream 530703 28899827 ~ 28900125 (+)
ephb2b LOC104917933,LOC103376520 other upstream 543650 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 1602173 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 1818111 26542507 ~ 26548799 (+)
G41825 NA other upstream 2093595 26268602 ~ 26273315 (+)
LOC120558088 LOC104941431 other upstream 2459172 25904769 ~ 25907738 (+)
G42449 NA other downstream 871289 29240413 ~ 29242253 (+)
ergic3 ergic3,LOC102788871 other downstream 1740411 30109535 ~ 30135834 (+)
G43045 NA other downstream 4091008 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 4101671 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 4668810 33037934 ~ 33041311 (+)

Expression


Co-expression Network