zgc:153675 (LOC104941726,LOC100706129,LOC106954467,LOC103130791,LOC107080719,LOC105920322,LOC101469258,LOC103464637)


Basic Information

Item Value
gene id zgc:153675
gene name LOC104941726,LOC100706129,LOC106954467,LOC103130791,LOC107080719,LOC105920322,LOC101469258,LOC103464637
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 29630099 ~ 29636640 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798903.1
GCAGAACCAGCAGGGTGAAAAGAGAGCTGCGTAGCTCAGCCTGTTAACTGTGTATGTGAGGAGAAGTTAGAAAGCAGCAGATTAACGCGATAAAGGCGTGAACAACGCGAAGAAGAGGCCAAAAACAGTCAGAGCAGCAGGTTTCAcacccacagagagagagagaaaatacatTAATTTGAAGCAGAGTTTTGTTCGGAAGGCTGAAACAGAAGCTGCTCCTGTCCCAAGTTTCTCTGTCAGGTGTGTCTGTGGGAGAAGCGCTGCGAACAATGGTGAAGAATGTGAACAGCGTTAATGTGGAGCCCCAGCCTGGGACCAGTGTGGCCCCGGATGAAGCTGAAAATGTCGACAGCCAACCTACAGAGGATTCTGGTAAGGACCATGTGGTGGCGCCCCCTGGCATGATGTGGCGGGTGACCGGTGGCCTCTTCAACGTCACCAAGGGAGTGGTGGGCGCGGCGGTGGGTGGGGTGGCCTGGGTGGGCGGCAAGAGCCTGGAGATCACCAAGTCAGCCGTGACCACAGTGCCCTCGATGGGGGTGGGGCTGGTGAAGGGCGGGGTGTCTGCCGTGGCTGGCGGCGTCTCCTCAGTGGGCTCGACCGTCGCCAGCAAAGTCCCGTTCACAGCCAAGAGGAAAGACAAGGCTGAGTGAAGAGCAGGAAGAAGAGGACGGTGAAGATGATGATTGACGATGACGATGGAATTGCCCCGCCCTGAGCCAGCAGAGAGAGGCTGATCTCTGTCTACCAGTCAAACTCCACAGTGCCTTCTGACGCCTTTCTCGGTCTCGAACATTAGAGTCTGGTCACCATGCAGAGATCTAGACTTTGATGCAAATACACTACATTCAgcaccaaaaaaaaagtcattagtaCTACAATACTGTGGCAACCCAGAATtaccagaaaaatgcagagtcacaGAAATGCTTCACACAAAGTTCTTCATCTGACTTGGAGTGGGATTTGTAGTTCTGGAAGTGACCACCTGGATCCAGGCAGATGATATGGACTGGGATACCATTCAGCACGTGGTGGACGACTTCATGAATATTTTGTGTCCGTTTACAATTCAGACTGAGgttgtcctctttcttttcttcattcTCTCCGAACTACGCATATTTAGTGAAATGTTTTTGAATCAAAGtgctgattttattttattttttgtcttttttttttttttttttgcaaagatATTGAAGTACTGTTGAAATGTGTGCGTTGagaaaaatacatgtttcaggGTTTTGAAAAGAGGGATGAGCAACATTCTTCAGTCTACAGGCTTCACTGTGTCTGACCTTTAATCTTTTGGACGAGCCCGGGAAGGTGTTTGACCCAGCAGCCTCTGATCTGCACGTAGGAACACTTCTCTGAAATGCTTGTCTGAAGACTGTCGATACAATCAAAAGTACGCCGACACTGGGCTCGGGTCTTTTCCACAGCTATAttgttgaaatattttgtttttattatgtgtgAAATGTTAAAATGCTGTGCTGGACCTTTGGAAagttgactttaaaaaaaaaaaaaaaagatttaataaagaaagaaacaatcgGCAGCATTTGATGGTTGTTTGAGAGGAAAGGGGGCCCAATGTTGTCTGAACTACTCAATCAGTAAAGGTTGAACTgtacctttctttttttttttaatcagaagGTGAACACTGTACTGGAGTGCAGGCCACATTTGCGAACATCTATATGCAATATCAGCATTTCAATGCAACATTCGGAGTGAATGGGAGCTGTTGCTGATGGGACTACACTATGTGAATGtcttgtatgtgtgttgttttcCCAATATATCAATAAAGTAGTGTTGAAGTTTAAA

Function

NR:

description
PREDICTED: transmembrane protein 263-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798903.1 True 1851 mRNA 0.46 3 29630099 29636640

Neighbor

gene id symbol gene type direction distance location
LOC120557724 cenpp,LOC104951285 coding upstream 34233 29485167 ~ 29595866 (+)
c4h6orf89 clg5h6orf89,LOC103369827,LOC104961369,LOC104933301,LOC101474837,LOC102304616 coding upstream 422330 29200840 ~ 29207769 (+)
st3gal8 NA coding upstream 643511 28950477 ~ 28986588 (+)
LOC120557450 NA coding upstream 680772 28925722 ~ 28949327 (+)
rem1 rem1 coding upstream 714451 28904998 ~ 28915648 (+)
hgh1 hgh1 coding downstream 2966 29639606 ~ 29657185 (+)
nisch NA coding downstream 33829 29670469 ~ 29717340 (+)
stab1 NA coding downstream 88872 29725512 ~ 29837466 (+)
LOC120557186 NA coding downstream 335853 29972493 ~ 29975991 (+)
LOC120557789 NA coding downstream 449783 30086423 ~ 30088843 (+)
LOC120557726 NA non-coding upstream 163437 29464818 ~ 29466662 (+)
G42453 LOC104927822 non-coding upstream 338354 29256755 ~ 29291745 (+)
G42441 NA non-coding upstream 401779 29225774 ~ 29228320 (+)
G42426 NA non-coding upstream 442385 29186974 ~ 29187714 (+)
G42428 NA non-coding upstream 443178 29186433 ~ 29186921 (+)
G42536 NA non-coding downstream 24566 29661206 ~ 29661426 (+)
G42655 pdhb non-coding downstream 282123 29918763 ~ 29984988 (+)
G42672 NA non-coding downstream 355283 29991923 ~ 29994778 (+)
G42674 NA non-coding downstream 366033 30002673 ~ 30005924 (+)
G42675 NA non-coding downstream 372397 30009037 ~ 30010008 (+)
G42449 NA other upstream 387846 29240413 ~ 29242253 (+)
ephb2b LOC104917933,LOC103376520 other upstream 1806839 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 2865362 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 3081300 26542507 ~ 26548799 (+)
G41825 NA other upstream 3356784 26268602 ~ 26273315 (+)
ergic3 ergic3,LOC102788871 other downstream 472895 30109535 ~ 30135834 (+)
G43045 NA other downstream 2823492 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 2834155 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 3401294 33037934 ~ 33041311 (+)
G43277 NA other downstream 3551098 33187738 ~ 33212318 (+)

Expression


Co-expression Network