Item | Value |
---|---|
gene id | zmat1 |
gene name | NA |
gene type | coding |
species | eurasian perch (Perca fluviatilis) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_053115.1 |
NCBI id | CM020912.1 |
chromosome length | 44863486 |
location | 10266815 ~ 10274959 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
description |
---|
zinc finger matrin-type protein 1-like isoform X2 |
id | name | namespace |
---|---|---|
GO:0090304 | nucleic acid metabolic process | biological_process |
GO:0006974 | cellular response to DNA damage stimulus | biological_process |
GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
GO:0006725 | cellular aromatic compound metabolic process | biological_process |
GO:1901360 | organic cyclic compound metabolic process | biological_process |
GO:0044237 | cellular metabolic process | biological_process |
GO:0044238 | primary metabolic process | biological_process |
GO:0071704 | organic substance metabolic process | biological_process |
GO:0043170 | macromolecule metabolic process | biological_process |
GO:0006807 | nitrogen compound metabolic process | biological_process |
GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
GO:0006259 | DNA metabolic process | biological_process |
GO:0046483 | heterocycle metabolic process | biological_process |
GO:0006281 | DNA repair | biological_process |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_039798950.1 | False | 2424 | mRNA | 0.46 | 7 | 10266815 | 10274959 |
XM_039798951.1 | False | 2340 | mRNA | 0.46 | 6 | 10266815 | 10274959 |
XM_039798954.1 | False | 2501 | mRNA | 0.45 | 7 | 10267544 | 10274959 |
XM_039798955.1 | True | 2704 | mRNA | 0.47 | 7 | 10267044 | 10274959 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
gnrh2 | NA | coding | upstream | 340 | 10264428 ~ 10266475 (+) |
ptpra | ptpra | coding | upstream | 9721 | 10232892 ~ 10257094 (+) |
idh3b | idh3b | coding | upstream | 36136 | 10219726 ~ 10230679 (+) |
drd5a | drd5 | coding | upstream | 222266 | 10040300 ~ 10044549 (+) |
otop1 | otop1 | coding | upstream | 227941 | 10029586 ~ 10038874 (+) |
cd8b | NA | coding | downstream | 3494 | 10278453 ~ 10282520 (+) |
cd8a | NA | coding | downstream | 15111 | 10290070 ~ 10293048 (+) |
pcsk1 | pcsk1 | coding | downstream | 65721 | 10340680 ~ 10355619 (+) |
LOC120557177 | LOC104957060 | coding | downstream | 81773 | 10356732 ~ 10359945 (+) |
ell2 | ell2 | coding | downstream | 89890 | 10364849 ~ 10384715 (+) |
G37186 | NA | non-coding | upstream | 6486 | 10257250 ~ 10260329 (+) |
G37177 | NA | non-coding | upstream | 60058 | 10204789 ~ 10206757 (+) |
G37163 | NA | non-coding | upstream | 214478 | 10052128 ~ 10052337 (+) |
G37104 | NA | non-coding | upstream | 259959 | 9928035 ~ 10006856 (+) |
G37198 | NA | non-coding | downstream | 35108 | 10310067 ~ 10311163 (+) |
G37215 | ube2r2 | non-coding | downstream | 127299 | 10402258 ~ 10434702 (+) |
G37238 | NA | non-coding | downstream | 178526 | 10453485 ~ 10453731 (+) |
G37337 | NA | non-coding | downstream | 251740 | 10526699 ~ 10526936 (+) |
G37342 | NA | non-coding | downstream | 279073 | 10554032 ~ 10559006 (+) |
prickle2b | prickle2 | other | upstream | 410159 | 9760233 ~ 9856656 (+) |
G36744 | NA | other | upstream | 2038095 | 8227762 ~ 8228720 (+) |
hcfc1a | hcfc1,LOC102799381,LOC102206223 | other | upstream | 2960472 | 7288907 ~ 7306343 (+) |
G36458 | LOC100304472,LOC107385856 | other | upstream | 2994447 | 7209996 ~ 7272368 (+) |
si:dkey-245f22.3 | NA | other | upstream | 3079601 | 7183199 ~ 7187214 (+) |
G37197 | NA | other | downstream | 30228 | 10305187 ~ 10309996 (+) |
glrx | glrx | other | downstream | 112949 | 10387908 ~ 10396187 (+) |
G37397 | LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 | other | downstream | 722271 | 10997230 ~ 11012909 (+) |
G37525 | evc2 | other | downstream | 1077119 | 11352078 ~ 11352387 (+) |
LOC120557336 | LOC103359259,LOC100704408,LOC101476502,LOC102796717,LOC102216118 | other | downstream | 1110225 | 11385184 ~ 11394398 (+) |