c4h1orf159 (LOC104931340,LOC103359840,LOC101474389,LOC108231181,LOC102786121,LOC107100091,LOC102306124)


Basic Information

Item Value
gene id c4h1orf159
gene name LOC104931340,LOC103359840,LOC101474389,LOC108231181,LOC102786121,LOC107100091,LOC102306124
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 18376550 ~ 18383095 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798962.1
TGTCCGTGCTAAATGAAATCAAGCAGGTAGCTGAGCTGCGCACTGACTATCTGTGGTTGAACTGCGGAGGTGTGTTGATGACAGATCTGCCAAAACCTAAAGTGACTTTCTGATAATAGCTCTGCGGCGGACCTGACCTGACGGTCATTAAACCACACCTAGGAGTTTGGTCAGGCCAAAGCCTAGTGTTTGTTTGGCTGGGTTTGAATATGGCTCTGTCATTCCTTTTGGTCTTGGCTGCAACTGTGATTCTTATCAGACCCGAGACACCTGTAACTAAGGCTTTACATCAGAACTCACTTGAGTGCTGTGGCGACAAACAGAGAGTGAACAATTCATGTTCAAACGACACGCACTGTGAACCAGGATGCTTCTTGCGTGTCCTTGACAACAGCAACACTGTTTGCATATTCTGTGACTCCGCAGCTGTGGATTTGGAGAACATAACAGTCTGCACTTACAACTATACGATGGAGAGGAAAAATCACACAACCGTAACTACTGTCATTCCTAAAATTGGAGGGCCAGGTGTGGCAGCCTCGCTTCTTCTGGGAACACTGTTGATCAGCCTGTTCCTGATCCTCTCCGTGGCCTCCTTTTTCTACCTCAAACGCTCCAACCGACTCCCGGGCATCTTCTACCGCCGCGACAAGGCCTTCATGTTCCAACCAAGTGAGACAGCTGTCATGATCCCCTCCTCGACAGTGAGGAAGCCGAGGTATGTCCGAAGGGAGCGGCCCTCTGCAACATCAACACTGAATAATGACACCGTACCCACCACATCCACCACCCAGGTCTACAATGTgtaggaggaggaaaaggaggaggtggaggggagGGAGTGCCAGGGCAGGTAGGAGAGAGAACGCTCAGGAACGATGTTAGGTTTAGTCATCACGTGAAGCTTCAGCAGTGTGAAGAAAGACCTCGAGTTGACTTGTACGAAGGTGGCCATATTTAACTGTAGCTGCTTCTGCTGCATTCTTGTCACGAGGGCTCTTACTTTATCGCTATTTAACAATCATTTTAAGTGTGAAATTGAGAAAGAATCCAGTAACTAAACTGTCAATCGTTTTGACACAGCCTCTGATATtacataattatgttttttttcactggaTAACTTAAACATCCCAggaaaaatgttttcagaatttCTCTGTAAATTTGGTCagattgtatttattatttattttttctcccgCCAACAGCACTTCAGGATCACTCCTTTTGTTTTGACCAATTTGATCTGCTGTTTGACGGTGCATGTTTGCTTGACTTGGCTTGACTTGATGGATTTCATGATACAGGACTGTTAaatgaatagtttgacattgAGAGGGAAAAGCTTGAAAGCTCTATAATTAACACGTTGTAcctcttttttaatctttacaaaaaccaaagtggaAAAACCACAATCCCTATCATGCGGGCCGGATTTTTCCCGACGAATTAAGGTTTTTCCACTTTGGTTTTTGTTCATATTAAACCAACAACATATAACGTTGTGATTATtgagctttaaaggtgctggtaggtggattgtgttgcctttggacagagcccggctagctgtttccccctgtttccagtctttatgctaagctaggtgGCTGCTGGCTACAGCCAAATTTTTTATTGATccaagagtggtatcaatcttcttatctaCCTCGCTGCCAGAAAGCtaataagcgtatttcccaaaatgtcaaactattgtaTTAAAGCAAAGATTGATCGAGCCAGTGGCCAAGTTGAGCGAcgggtgattttttttatttattttttttatttttttgggacaAAGTCATAGCCCAATGACGTTTGATAGAGGCCTGTGTTTGTTAATTAGGCTGTTATTtacatgtgtgtatttatttacattttcttgCTGTGCACTGAATTTTACTGATTATAATCAGACCAACAGAATAAATAATGCGTCTAGCAGTAGAGTTCTTCTGGTGGACCAGGAAATTTTAGGGAGAGTTACTGTAGGCGCTGACTGGATGATTGTTTGAttggttgtggtttttattattgcatttgtatttattattttttgtgagCTTAACCAAGAGGAATGTATTCCACATGTACAACAAATTACGCATCATGAATTGCATTCCACAACAGACCCAGTCAAACATGAGAGATGTGAACTCATTTTCAACAACAGAATCATattttttcacacattttaaaataccaGTTTTGTTCCATGAAGTAGATTCAAATTCCAATAGATTTCTCTCTTAAACCATAAAATGAATCCTAGTGCACTTTATATGTCTGAAGTCATCTGCTAATGTTGGACAAGTATGAATGAGATGTTTTTTGTATAGATGGCAACAATATTGTTGCATTGTCGAATTTACGTGACTACTATAAACTTTTGCCAAATGTCTGAAGAAAATTGACAAAACtgtgtgccatttctgtgaTTACTGTGCCATCATGAGCTTTAAATGCAGCCAGGAAACATATAGTCATGACGTGATGAATAATTGGAATTCTATCCAGTGGCCTTTACTGTACACAATTCACAAGGCTAGATATCCAAGTTTTATTTGCTGTTTAATTACATAAAGTTTGATTATATTGACAACAATAAGGTTGTGAAAATTATTTCCGTCATCAGTATATGTGAAGCAACATGAAGTGAACCATGATAAAAAGGCAGCAACCATTCCATGAATATTCCCCGTTTTGCCATTGAACAGACAACCATAAGCTGAcatgtatatattgttttatacaAAATgatgtattgtttttgtaatgATGTATAGTACATATTTTAGTTTCAATGCCATAAAGAATGTTCTAAAGATGTATGTAACGTTTGGAGAAATAAAGCACCTTTCCATAACTTTCCTCTGTGCAGTTATATGAACTCTCACTCTGCTACTTTTTTGTGTGACACTAGTTAGCTGTTATTGTTTAAAGACAAATTTGAATAATGTTAATGTTTCTTTTGTGGTTCCTGCTGCTAATAATAAACAATGCCTCACTGTG
>XM_039798963.1
TGTCCGTGCTAAATGAAATCAAGCAGGTAGCTGAGCTGCGCACTGACTATCTGTGGTTGAACTGCGGAGGTGTGTTGATGACAGATCTGCCAAAACCTAAAGTGACTTTCTGATAATAGCTCTGCGGCGGACCTGACCTGACGGTCATTAAACCACACCTAGGAGTTTGGTCAGGCCAAAGCCTAGTGTTTGTTTGGCTGGGTTTGAATATGGCTCTGTCATTCCTTTTGGTCTTGGCTGCAACTGTGATTCTTATCAGACCCGAGACACCTGTAACTAAGGCTTTACATCAGAACTCACTTGAGTGCTGTGGCGACAAACAGAGAGTGAACAATTCATGTTCAAACGACACGCACTGTGAACCAGGATGCTTCTTGCGTGTCCTTGACAACAGCAACACTGTTTGCATATTCTGTGACTCCGCAGCTGTGGATTTGGAGAACATAACAGTCTGCACTTACAACTATACGATGGAGAGGAAAAATCACACAACCGTAACTACTGTCATTCCTAAAATTGCCCTTTCCGGTTCTGTGATGTTTCTGAGCAGGAGGGCCAGGTGTGGCAGCCTCGCTTCTTCTGGGAACACTGTTGATCAGCCTGTTCCTGATCCTCTCCGTGGCCTCCTTTTTCTACCTCAAACGCTCCAACCGACTCCCGGGCATCTTCTACCGCCGCGACAAGGCCTTCATGTTCCAACCAAGTGAGACAGCTGTCATGATCCCCTCCTCGACAGTGAGGAAGCCGAGGTATGTCCGAAGGGAGCGGCCCTCTGCAACATCAACACTGAATAATGACACCGTACCCACCACATCCACCACCCAGGTCTACAATGTgtaggaggagga

Function

NR:

description
PREDICTED: uncharacterized protein C1orf159 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798962.1 True 3024 mRNA 0.40 9 18376550 18383095
XM_039798963.1 False 848 mRNA 0.50 9 18376550 18380888

Neighbor

gene id symbol gene type direction distance location
kbtbd12 kbtbd12,LOC103464606 coding upstream 4648 18367978 ~ 18371902 (+)
p4htm LOC103359812,LOC100700943 coding upstream 21709 18345749 ~ 18354841 (+)
LOC120557883 LOC107385142,LOC107385141 coding upstream 31698 18331848 ~ 18344852 (+)
LOC120557727 LOC104967509,LOC102788387 coding upstream 90323 18231769 ~ 18286227 (+)
abhd14a abhd14a coding upstream 164601 18206629 ~ 18211949 (+)
si:ch211-157b11.14 NA coding downstream 1498 18384593 ~ 18391656 (+)
ppil1 ppil1,LOC102783931 coding downstream 41412 18424507 ~ 18428598 (+)
tspo tspo coding downstream 132203 18515298 ~ 18517711 (+)
tomm6 NA coding downstream 138664 18521759 ~ 18523086 (+)
c4h1orf74 LOC104948860 coding downstream 140060 18523155 ~ 18524040 (+)
G39665 NA non-coding upstream 523184 17852516 ~ 17853366 (+)
G39654 NA non-coding upstream 590740 17785259 ~ 17785810 (+)
G39638 NA non-coding upstream 640644 17735486 ~ 17735906 (+)
G39633 NA non-coding upstream 654202 17715412 ~ 17722348 (+)
G39630 NA non-coding upstream 685974 17689804 ~ 17690576 (+)
G39861 NA non-coding downstream 65752 18448847 ~ 18452500 (+)
LOC120557393 NA non-coding downstream 161060 18544155 ~ 18547192 (+)
G39925 NA non-coding downstream 187496 18570591 ~ 18570983 (+)
G39926 NA non-coding downstream 190587 18573682 ~ 18573909 (+)
G39927 NA non-coding downstream 190887 18573982 ~ 18574211 (+)
LOC120557740 acy1 other upstream 149972 18215706 ~ 18226578 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other upstream 181639 18189582 ~ 18194911 (+)
wnk2 wnk2,LOC104946158 other upstream 446432 17904698 ~ 17930118 (+)
LOC120556838 NA other upstream 642539 17720441 ~ 17734011 (+)
G39581 LOC104949003,LOC103357913 other upstream 767334 17607930 ~ 17609216 (+)
oxtrl LOC104920519,LOC103360274,LOC100702815,LOC102207462,LOC102295060 other downstream 913164 19296259 ~ 19314826 (+)
G40164 LOC103360294,LOC104965627,LOC100702547 other downstream 941734 19324829 ~ 19326625 (+)
brk1 brk1,BRK1,LOC106565571 other downstream 1041771 19424866 ~ 19426456 (+)
slc38a3b LOC103360384 other downstream 1058913 19442008 ~ 19470998 (+)
LOC120557344 LOC104966310 other downstream 1234086 19617181 ~ 19632519 (+)

Expression


Co-expression Network