rassf1 (LOC104967512)


Basic Information

Item Value
gene id rassf1
gene name LOC104967512
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 18177743 ~ 18187751 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799020.1
CCAGATTAGACGGTAATCCCACACTCACAATGTGCATGCGCAAACTAAAGTGCGTGAGACGGACGACGGACGGTTCGGTGTTAATACAAACAACAAACTGCGTTCACTCTCCATACCAAATCCCCTGTACGAGAATTGGCGATGATGACTTAAACGAGCTCCTAAGGACTTGACCTGACCTGGTGCTTTCCTCGCtccaaatactgtacatttgatCAAAGCCCGACATTCACAACATCCTTATTAAGGATGCAAGGGTGCACATAATGCTGTTTCCTCTTTGGGCTGGATGTATACCCATAGCCTACTAGCTCATGGGCAGCAAGTGCTCACTTGACATTTCAGAGTCTGTATCAGCGACAGGATGTCTAAATGTGAGCTGATTGAGCTGAAGGACCTCAGTGTAAATGATCCCATTGAGCTGGCTGCTCCTGCGGCCCGCACAGCCCCACCACCTGTAAACCCGGGTCAGCCAAGCCTCTTCCATGTCGTCCGTCTGGTCGGAGACAGCGTCAGCATCGAGGCACCCCAGTGCCAGATAGAAGAGGCTGGCGTGGGTCATGACTTCCAGCCGTACAGTCACACCCATCTCACCTGGTGTGACCTGTGTGGAGAATTCATCTGGGGTCTTTATAAGCAAAGTTTACGCTGCGCCAacTGCAGTTACACTTGTCACTACCGCTGCCGACCATTCATCCAGCTGGACTGCAGCACAGATAATTTGTTGACAAACAAGGAAGATTTCTCTATCGACTCCCTCGAGACAGACACAAATGTGGACGAACAGATCGATTGGGGTAACCGGGCGTTGACTGTTAGTGAGATTCAACAGAAGGTTAAGGAGTATAATGCACAGATCAACAGCAATCTCTACATGATGGTTAATAAAGACGGGTCCTACACTGGTTTCATCAAGGTTCACTTTCAGTTAGTCCGTCcaatctccctccctccctctcagagCCTGTGCTCAACACAGGAGGAAGATCAGCAGGGCAGAGGGATGAAACGGCGGACATCTTTCTACCTCCCCAAAGATGCTGCCAAGCACCTGCATATTAGCTCCCAAACACGTGTGCGAGAAGTCATCGAGGCATTGCTTAACAAGTTCACCGTGGTGGACAACCCGGCCAAGTTTGCCCTGTTTGAACGTGCTGAGAGACAAAGTCAAGtgTACATGCGTAAACTGCCTGATGATGAGTGCCCTCTCTACCTGCGCTTGTGTGCTGGCCCCAGTGAAAAAGTCTTGAGTCTGGTTTTGAAAGAGAATGAGACAGGGGAAGTGAATTGGGACGCGTTTAGTTTTCCTGAGTTGTGCAACTTTTTGCGAATCCTGAAGCGTGAGGAAGAAGAGCATGTGCGGCAGATTGTGAAGCGCTACGCTCTTGCTAGAGACACGATGAAGCAGGCCATGGCAAGGATTACTACTCCTGGTTGACTTTAAGCGATTCAACTGATCTTCGTATTTTAATATGATGAAGAAACTTCTGCCACTTTGAATACTATTGTTGATTAGCAATGTAAAAGGGAAGGAAAGAGCTCAGACAATGACACTGACAAGGCTTACTGTAGGCCCTGTTCATTTTGTGCAAGTAGAGCCACTGTTGGGAGAAGTAATAGATTATCTTGGATTTAATTGGATGCAgttctttcttttaaaaaacgATGCTGCTTGACTGGATTATTTATAGTGGTAATAACTTTTAGTCTTTCTGGGCATTTATCAtatttagtttcatttatatTCTGTGAAGCTGTTTGAAAAATGTTGGCACTTTAATGAACCTGTAAATTGGATTTTCGGCAAGTTAAATGTGAAACAATGTGTTTACATTCTAACTATTTAATAAAGTGATGATAGTGGTCA
>XM_039799021.1
AAGCTACAATCACATATTTTATCAATAGTACATTTGTATAGAAAGCTGTCTTTATTGGATTGTTTTAGGTGAGTAGGTCAAAGCAGATGGAGGCCACCAGATTGTCCGCTGCTGTCCAGAGTGTCACTGTGCCATATGTCCTCAAAGACGCTGGTTTTATTACCTCCTCATTGTCAATGCATCTATAGAGAACGTAATTTAGGAGAGAGCTAAGGGGAGGGAATAACTTAAcaactttacaataaaacaGCTGCCTTTATTTCAGAACCACACAAAACAAATCTAGGACCAACAGTTATCAGATAGTTATCAGAAAGGATTGGTTCACTGTTTTTCAGCTCACTCAGacaatattaataataagtCTACCATCATGTCCAATGGGGCATTCAGCAAAAATCAGAAAAGTTGATATATCATGATTTTTAAAGCCCTAATAGATTGCTTAACTAGACTGTGTAATATGGGACATATTATGGAAGACTCACTTTTTTCGGTGCTTGTGCACATACCTATGTCTCGTACAGGCTCATTAGGATATACTGGCCCCCATCTGAGTATCTCCACCCATGGCTTAGAACTACCTTTGCAAAGGTGCTCCATATTTTTCtcacaagccaatcagagcagactgggctttttcaggaggaTGGCTTAAAGAcactaaaacggagcgtttcagacagagggtgaacaCAGGTACGCTATATTCAAACAGACAGTaggagaaaaataatgtgtttttaaaaaaaaattaaagtatgtaaacatgttcttgtAGAAACCCAACATACAAGTATGCACATGAACATTTGCATTATTATATCCCCTTTAAAACACAGCATGAATATGTGGCAGAATGGGGAATTTCTGGTGGAGTTGTGATATGGTTAGTTATATATGGAAACTACATTTTAATGTGAATATGTACACACATATCAGCAATAACATTGGGTGAAAGTGTTTCATTTAGGATCATTTGAGCAGCTCTCCTCTGGGGGTGGGCTGGCCATTTAGACATCTTTGTGAGGTTTTATTGTCAGGGAGGAGCAAATGGAAACGCTGAGGTCAAAAGAGCTGTTAGCAGAATCAGATCTCTCGAGGCAGAAGAAAGGACAGAGGAGAGCTAAGTAAATTCTGACATATAACTCCAGAAATTATTTTAAGATTTTGGCAATGACAAAAATCTAATAAAGTTCACTGGAACCTTGGAGATGACCTGGGGAAGCACAGCAAGTACTGACACATTCTGCAGCCAGGAGGACAGTAGCTCAGAGCTGGAACCGTATTTTACTGCATATACGTCTTTCTTTCACAAGGTAAGAAGATCAGCGGACGAACAGATCGATTGGGGTAACCGGGCGTTGACTGTTAGTGAGATTCAACAGAAGGTTAAGGAGTATAATGCACAGATCAACAGCAATCTCTACATGATGGTTAATAAAGACGGGTCCTACACTGGTTTCATCAAGGTTCACTTTCAGTTAGTCCGTCcaatctccctccctccctctcagagCCTGTGCTCAACACAGGAGGAAGATCAGCAGGGCAGAGGGATGAAACGGCGGACATCTTTCTACCTCCCCAAAGATGCTGCCAAGCACCTGCATATTAGCTCCCAAACACGTGTGCGAGAAGTCATCGAGGCATTGCTTAACAAGTTCACCGTGGTGGACAACCCGGCCAAGTTTGCCCTGTTTGAACGTGCTGAGAGACAAAGTCAAGtgTACATGCGTAAACTGCCTGATGATGAGTGCCCTCTCTACCTGCGCTTGTGTGCTGGCCCCAGTGAAAAAGTCTTGAGTCTGGTTTTGAAAGAGAATGAGACAGGGGAAGTGAATTGGGACGCGTTTAGTTTTCCTGAGTTGTGCAACTTTTTGCGAATCCTGAAGCGTGAGGAAGAAGAGCATGTGCGGCAGATTGTGAAGCGCTACGCTCTTGCTAGAGACACGATGAAGCAGGCCATGGCAAGGATTACTACTCCTGGTTGACTTTAAGCGATTCAACTGATCTTCGTATTTTAATATGATGAAGAAACTTCTGCCACTTTGAATACTATTGTTGATTAGCAATGTAAAAGGGAAGGAAAGAGCTCAGACAATGACACTGACAAGGCTTACTGTAGGCCCTGTTCATTTTGTGCAAGTAGAGCCACTGTTGGGAGAAGTAATAGATTATCTTGGATTTAATTGGATGCAgttctttcttttaaaaaacgATGCTGCTTGACTGGATTATTTATAGTGGTAATAACTTTTAGTCTTTCTGGGCATTTATCAtatttagtttcatttatatTCTGTGAAGCTGTTTGAAAAATGTTGGCACTTTAATGAACCTGTAAATTGGATTTTCGGCAAGTTAAATGTGAAACAATGTGTTTACATTCTAACTATTTAATAAAGTGATGATAGTGGTCA

Function

NR:

description
ras association domain-containing protein 1-like

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799020.1 False 1867 mRNA 0.46 7 18177743 18187751
XM_039799021.1 True 2423 mRNA 0.41 5 18183035 18187751

Neighbor

gene id symbol gene type direction distance location
rad54l2 LOC103359734 coding upstream 5613 18158189 ~ 18172130 (+)
LOC120556657 LOC104967522,LOC103359687 coding upstream 165255 18007456 ~ 18012488 (+)
LOC120557500 NA coding upstream 170365 17999932 ~ 18007378 (+)
LOC120556720 NA coding upstream 179206 17982485 ~ 17998537 (+)
LOC120557499 LOC102289810 coding upstream 199141 17965362 ~ 17978602 (+)
hyal2b LOC103359756,LOC104967514 coding downstream 8394 18196145 ~ 18201292 (+)
abhd14a abhd14a coding downstream 18878 18206629 ~ 18211949 (+)
LOC120557727 LOC104967509,LOC102788387 coding downstream 44018 18231769 ~ 18286227 (+)
LOC120557883 LOC107385142,LOC107385141 coding downstream 144097 18331848 ~ 18344852 (+)
p4htm LOC103359812,LOC100700943 coding downstream 157998 18345749 ~ 18354841 (+)
G39665 NA non-coding upstream 324377 17852516 ~ 17853366 (+)
G39654 NA non-coding upstream 391933 17785259 ~ 17785810 (+)
G39638 NA non-coding upstream 441837 17735486 ~ 17735906 (+)
G39633 NA non-coding upstream 455395 17715412 ~ 17722348 (+)
G39630 NA non-coding upstream 487167 17689804 ~ 17690576 (+)
G39861 NA non-coding downstream 261096 18448847 ~ 18452500 (+)
LOC120557393 NA non-coding downstream 356404 18544155 ~ 18547192 (+)
G39925 NA non-coding downstream 382840 18570591 ~ 18570983 (+)
G39926 NA non-coding downstream 385931 18573682 ~ 18573909 (+)
G39927 NA non-coding downstream 386231 18573982 ~ 18574211 (+)
wnk2 wnk2,LOC104946158 other upstream 247625 17904698 ~ 17930118 (+)
LOC120556838 NA other upstream 443732 17720441 ~ 17734011 (+)
G39581 LOC104949003,LOC103357913 other upstream 568527 17607930 ~ 17609216 (+)
LOC120557637 minos1,LOC103357934 other upstream 800183 17371483 ~ 17377560 (+)
srsf3b srsf3,LOC104948713,LOC103465186,LOC102226051,LOC103150674 other upstream 979526 17193151 ~ 17198217 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other downstream 1831 18189582 ~ 18194911 (+)
LOC120557740 acy1 other downstream 27955 18215706 ~ 18226578 (+)
oxtrl LOC104920519,LOC103360274,LOC100702815,LOC102207462,LOC102295060 other downstream 1108508 19296259 ~ 19314826 (+)
G40164 LOC103360294,LOC104965627,LOC100702547 other downstream 1137078 19324829 ~ 19326625 (+)
brk1 brk1,BRK1,LOC106565571 other downstream 1237115 19424866 ~ 19426456 (+)

Expression


Co-expression Network