uba3 (LOC104944983)


Basic Information

Item Value
gene id uba3
gene name LOC104944983
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 8791740 ~ 8798039 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799035.1
ACAAGCAAGAAACAGTCATTAACTGCCCGAAAGATGCTTTCAAATCTCATTAACCTACGAAAGCACAGCATGAATGAAACTTCTTTTATTCTCTCTTTTTAGggagaagaaaagaaggagagtAGTGGAGCTGGCTGAGAAgatGGTGGTTGATGGAGGCAGTGGACGCACCTGTGAGTGGGAGGGGCGGTGGAACCATATCAAAAAGTTTTTGGAAAGGTCTGGGCCCTTCACGCATCCTGACTTTGAACCTAGCACAGAGTCTTTGCAGTTTATGTTAGAAACCTGCAAAATCCTGGTCATTGGTGCTGGTGGTCTGGGATGTGAGCTGCTGAAAGACCTGGCTTTATCAGGCTTTCATAACATTCATGTTGTTGACATGGACACCATTGATTTGTCAAACCTGAATCGACAGTTCCTCTTCAGGCCAAAAGATGTCGGTCGGCCCAAGGCGGACGTTGCAGCTGACTTCATCAACAGCCGCATACCTGGGTGCTGTGTAGTCCCACATTTTAAGAAAATTCAAGACTTAGATGAAACATTCTACAGACAATTCCATATCATTGTCTGTGGACTGGACTCTATAGTTGCCAGGAGGTGGATGAATGGTATGCTGCTGTCTTTACTGGTGTATGAGGATGGTGTCTTAGACCCAGGTTCCATCATTCCTCTAATTGATGGTGGGACTGAAGGCTTTAAAGGCAATGCCAGAGTCATTCTCCCTGGCATGACCGCCTGCATCGACTGTACCCTTGAGCTTTACCCTCCTCAGATCAACTTCCCCATGTGTACAATAGCCTCCATGCCTCGATTGCCAGAACATTGCATTGAGTATGTCCGGGTGCTGCTGTGGCCCAAAGAGACACCCTTTGGAGATGGTGTGATCCTGGATGGGGATGACCCAGAGCACATCCAGTGGGTGTACCAGAGATCCCTGGAGAGGGCAGCAGATTTCCACATAACAGGAGTCACATACAGACTAACCCAGGGTGTTGTAAAGAGGATAATTCCAGCTGTAGCGTCTACAAATGCTGTCATAGCTGCTGCTTGTGCAACTGAGGTTTTCAAAATAGCATCAAGTGCCTATATACCTCTTAATAACTACATGGTCTTCAATGATGTCGACGGGCTGTACACCTACACTTTTGAAGCAGAACGAAAGGAAAACTGTTCAGCCTGCAGCCAGGTACCTCTGGACTTGCACTTTTCTCCATCTTCCAAACTCCAGGAGATGTTGGACTACCTGACTGAGAGTGCCTCCCTACAAATGAAATCCCCTGCTATAACCGCAACAGTGGAAGGAAAGAACAAAACATTATATTTACAGtcTGTCGCTTCAATTGAACAGAGGACACGGCCAAATCTGTCCAAAACCCTGAAGGAGCTGGGGCTGACTGACGGACAAGAGCTTGCTGTAGCTGATGTCACCACACCCCAGACCATGTTGTTCAGACTCTGCTTTACCTCATAGGATAAACTCAAGCACTCCCACACAACCAGTTGATGTCATTCTTGTTTATTGGCCAACtataacttgatgcagaatatTTAAAATGGCCTAAAAACTAGAACAGTTTAAAGTGTATTCATTCTCAGTGTAAATGAACAGTGTAATTTCATCGTTTTAATTTACTTATTGACTAAAGTTAATGTTTTGCACTGAAAAGCCAAAATCATAGTTCATACCTTCTCATCTTTTGGTGAAACATTGCTTGCAAATGTCGAGGATTTTGGCATTCAATGTGTTATTTGCACTACAACCTGAAGCGTGCTATGTGCAAACAAAGAGACATAAATTTGTTACTTTGGTAAATGTATTCTGTACATGTTCtagttttaaatattttgaatatttatttattccaaCAGTTTTTTTAGTTGCAGAAACCACTGAAGTGGTAATCGACAGACACTGATAATGATGTGTGACCtggaataaaaatgtttttcttacaaa
>XM_039799036.1
TGTTAACGTCGGCATTTGAAGGCAATATAGCTAGCTAAGTAGCCAAACATGGCCGACACGGATGAGCCggagaagaaaagaaggagagtAGTGGAGCTGGCTGAGAAgatGGTGGTTGATGGAGGCAGTGGACGCACCTGTGAGTGGGAGGGGCGGTGGAACCATATCAAAAAGTTTTTGGAAAGGTCTGGGCCCTTCACGCATCCTGACTTTGAACCTAGCACAGAGTCTTTGCAGTTTATGTTAGAAACCTGCAAAATCCTGGTCATTGGTGCTGGTGGTCTGGGATGTGAGCTGCTGAAAGACCTGGCTTTATCAGGCTTTCATAACATTCATGTTGTTGACATGGACACCATTGATTTGTCAAACCTGAATCGACAGTTCCTCTTCAGGCCAAAAGATGTCGGTCGGCCCAAGGCGGACGTTGCAGCTGACTTCATCAACAGCCGCATACCTGGGTGCTGTGTAGTCCCACATTTTAAGAAAATTCAAGACTTAGATGAAACATTCTACAGACAATTCCATATCATTGTCTGTGGACTGGACTCTATAGTTGCCAGGAGGTGGATGAATGGTATGCTGCTGTCTTTACTGGTGTATGAGGATGGTGTCTTAGACCCAGGTTCCATCATTCCTCTAATTGATGGTGGGACTGAAGGCTTTAAAGGCAATGCCAGAGTCATTCTCCCTGGCATGACCGCCTGCATCGACTGTACCCTTGAGCTTTACCCTCCTCAGATCAACTTCCCCATGTGTACAATAGCCTCCATGCCTCGATTGCCAGAACATTGCATTGAGTATGTCCGGGTGCTGCTGTGGCCCAAAGAGACACCCTTTGGAGATGGTGTGATCCTGGATGGGGATGACCCAGAGCACATCCAGTGGGTGTACCAGAGATCCCTGGAGAGGGCAGCAGATTTCCACATAACAGGAGTCACATACAGACTAACCCAGGGTGTTGTAAAGAGGATAATTCCAGCTGTAGCGTCTACAAATGCTGTCATAGCTGCTGCTTGTGCAACTGAGGTTTTCAAAATAGCATCAAGTGCCTATATACCTCTTAATAACTACATGGTCTTCAATGATGTCGACGGGCTGTACACCTACACTTTTGAAGCAGAACGAAAGGAAAACTGTTCAGCCTGCAGCCAGGTACCTCTGGACTTGCACTTTTCTCCATCTTCCAAACTCCAGGAGATGTTGGACTACCTGACTGAGAGTGCCTCCCTACAAATGAAATCCCCTGCTATAACCGCAACAGTGGAAGGAAAGAACAAAACATTATATTTACAGtcTGTCGCTTCAATTGAACAGAGGACACGGCCAAATCTGTCCAAAACCCTGAAGGAGCTGGGGCTGACTGACGGACAAGAGCTTGCTGTAGCTGATGTCACCACACCCCAGACCATGTTGTTCAGACTCTGCTTTACCTCATAGGATAAACTCAAGCACTCCCACACAACCAGTTGATGTCATTCTTGTTTATTGGCCAACtataacttgatgcagaatatTTAAAATGGCCTAAAAACTAGAACAGTTTAAAGTGTATTCATTCTCAGTGTAAATGAACAGTGTAATTTCATCGTTTTAATTTACTTATTGACTAAAGTTAATGTTTTGCACTGAAAAGCCAAAATCATAGTTCATACCTTCTCATCTTTTGGTGAAACATTGCTTGCAAATGTCGAGGATTTTGGCATTCAATGTGTTATTTGCACTACAACCTGAAGCGTGCTATGTGCAAACAAAGAGACATAAATTTGTTACTTTGGTAAATGTATTCTGTACATGTTCtagttttaaatattttgaatatttatttattccaaCAGTTTTTTTAGTTGCAGAAACCACTGAAGTGGTAATCGACAGACACTGATAATGATGTGTGACCtggaataaaaatgtttttcttacaaa
>XM_039799037.1
gctagctcaaTAAGCTAATCTGATAGTTGttgtaaacaataaaacagtgACTAGTTGGACATGAGTAGCTAACACGTCTATTCAGTAAAACATGCATGGCATATTTTACCTCTATGCAAAgatGGTGGTTGATGGAGGCAGTGGACGCACCTGTGAGTGGGAGGGGCGGTGGAACCATATCAAAAAGTTTTTGGAAAGGTCTGGGCCCTTCACGCATCCTGACTTTGAACCTAGCACAGAGTCTTTGCAGTTTATGTTAGAAACCTGCAAAATCCTGGTCATTGGTGCTGGTGGTCTGGGATGTGAGCTGCTGAAAGACCTGGCTTTATCAGGCTTTCATAACATTCATGTTGTTGACATGGACACCATTGATTTGTCAAACCTGAATCGACAGTTCCTCTTCAGGCCAAAAGATGTCGGTCGGCCCAAGGCGGACGTTGCAGCTGACTTCATCAACAGCCGCATACCTGGGTGCTGTGTAGTCCCACATTTTAAGAAAATTCAAGACTTAGATGAAACATTCTACAGACAATTCCATATCATTGTCTGTGGACTGGACTCTATAGTTGCCAGGAGGTGGATGAATGGTATGCTGCTGTCTTTACTGGTGTATGAGGATGGTGTCTTAGACCCAGGTTCCATCATTCCTCTAATTGATGGTGGGACTGAAGGCTTTAAAGGCAATGCCAGAGTCATTCTCCCTGGCATGACCGCCTGCATCGACTGTACCCTTGAGCTTTACCCTCCTCAGATCAACTTCCCCATGTGTACAATAGCCTCCATGCCTCGATTGCCAGAACATTGCATTGAGTATGTCCGGGTGCTGCTGTGGCCCAAAGAGACACCCTTTGGAGATGGTGTGATCCTGGATGGGGATGACCCAGAGCACATCCAGTGGGTGTACCAGAGATCCCTGGAGAGGGCAGCAGATTTCCACATAACAGGAGTCACATACAGACTAACCCAGGGTGTTGTAAAGAGGATAATTCCAGCTGTAGCGTCTACAAATGCTGTCATAGCTGCTGCTTGTGCAACTGAGGTTTTCAAAATAGCATCAAGTGCCTATATACCTCTTAATAACTACATGGTCTTCAATGATGTCGACGGGCTGTACACCTACACTTTTGAAGCAGAACGAAAGGAAAACTGTTCAGCCTGCAGCCAGGTACCTCTGGACTTGCACTTTTCTCCATCTTCCAAACTCCAGGAGATGTTGGACTACCTGACTGAGAGTGCCTCCCTACAAATGAAATCCCCTGCTATAACCGCAACAGTGGAAGGAAAGAACAAAACATTATATTTACAGtcTGTCGCTTCAATTGAACAGAGGACACGGCCAAATCTGTCCAAAACCCTGAAGGAGCTGGGGCTGACTGACGGACAAGAGCTTGCTGTAGCTGATGTCACCACACCCCAGACCATGTTGTTCAGACTCTGCTTTACCTCATAGGATAAACTCAAGCACTCCCACACAACCAGTTGATGTCATTCTTGTTTATTGGCCAACtataacttgatgcagaatatTTAAAATGGCCTAAAAACTAGAACAGTTTAAAGTGTATTCATTCTCAGTGTAAATGAACAGTGTAATTTCATCGTTTTAATTTACTTATTGACTAAAGTTAATGTTTTGCACTGAAAAGCCAAAATCATAGTTCATACCTTCTCATCTTTTGGTGAAACATTGCTTGCAAATGTCGAGGATTTTGGCATTCAATGTGTTATTTGCACTACAACCTGAAGCGTGCTATGTGCAAACAAAGAGACATAAATTTGTTACTTTGGTAAATGTATTCTGTACATGTTCtagttttaaatattttgaatatttatttattccaaCAGTTTTTTTAGTTGCAGAAACCACTGAAGTGGTAATCGACAGACACTGATAATGATGTGTGACCtggaataaaaatgtttttcttacaaa
>XM_039799038.1
TTGGGACTAATTTTACATTATTGCCTAAGAGAGGTTGTATTTACCACTGTTAACGTCGGCATTTGAAGGCAATATAGCTAGCTAAGTAGCCAAACATGGCCGACACGGATGAGCCgatGGTGGTTGATGGAGGCAGTGGACGCACCTGTGAGTGGGAGGGGCGGTGGAACCATATCAAAAAGTTTTTGGAAAGGTCTGGGCCCTTCACGCATCCTGACTTTGAACCTAGCACAGAGTCTTTGCAGTTTATGTTAGAAACCTGCAAAATCCTGGTCATTGGTGCTGGTGGTCTGGGATGTGAGCTGCTGAAAGACCTGGCTTTATCAGGCTTTCATAACATTCATGTTGTTGACATGGACACCATTGATTTGTCAAACCTGAATCGACAGTTCCTCTTCAGGCCAAAAGATGTCGGTCGGCCCAAGGCGGACGTTGCAGCTGACTTCATCAACAGCCGCATACCTGGGTGCTGTGTAGTCCCACATTTTAAGAAAATTCAAGACTTAGATGAAACATTCTACAGACAATTCCATATCATTGTCTGTGGACTGGACTCTATAGTTGCCAGGAGGTGGATGAATGGTATGCTGCTGTCTTTACTGGTGTATGAGGATGGTGTCTTAGACCCAGGTTCCATCATTCCTCTAATTGATGGTGGGACTGAAGGCTTTAAAGGCAATGCCAGAGTCATTCTCCCTGGCATGACCGCCTGCATCGACTGTACCCTTGAGCTTTACCCTCCTCAGATCAACTTCCCCATGTGTACAATAGCCTCCATGCCTCGATTGCCAGAACATTGCATTGAGTATGTCCGGGTGCTGCTGTGGCCCAAAGAGACACCCTTTGGAGATGGTGTGATCCTGGATGGGGATGACCCAGAGCACATCCAGTGGGTGTACCAGAGATCCCTGGAGAGGGCAGCAGATTTCCACATAACAGGAGTCACATACAGACTAACCCAGGGTGTTGTAAAGAGGATAATTCCAGCTGTAGCGTCTACAAATGCTGTCATAGCTGCTGCTTGTGCAACTGAGGTTTTCAAAATAGCATCAAGTGCCTATATACCTCTTAATAACTACATGGTCTTCAATGATGTCGACGGGCTGTACACCTACACTTTTGAAGCAGAACGAAAGGAAAACTGTTCAGCCTGCAGCCAGGTACCTCTGGACTTGCACTTTTCTCCATCTTCCAAACTCCAGGAGATGTTGGACTACCTGACTGAGAGTGCCTCCCTACAAATGAAATCCCCTGCTATAACCGCAACAGTGGAAGGAAAGAACAAAACATTATATTTACAGtcTGTCGCTTCAATTGAACAGAGGACACGGCCAAATCTGTCCAAAACCCTGAAGGAGCTGGGGCTGACTGACGGACAAGAGCTTGCTGTAGCTGATGTCACCACACCCCAGACCATGTTGTTCAGACTCTGCTTTACCTCATAGGATAAACTCAAGCACTCCCACACAACCAGTTGATGTCATTCTTGTTTATTGGCCAACtataacttgatgcagaatatTTAAAATGGCCTAAAAACTAGAACAGTTTAAAGTGTATTCATTCTCAGTGTAAATGAACAGTGTAATTTCATCGTTTTAATTTACTTATTGACTAAAGTTAATGTTTTGCACTGAAAAGCCAAAATCATAGTTCATACCTTCTCATCTTTTGGTGAAACATTGCTTGCAAATGTCGAGGATTTTGGCATTCAATGTGTTATTTGCACTACAACCTGAAGCGTGCTATGTGCAAACAAAGAGACATAAATTTGTTACTTTGGTAAATGTATTCTGTACATGTTCtagttttaaatattttgaatatttatttattccaaCAGTTTTTTTAGTTGCAGAAACCACTGAAGTGGTAATCGACAGACACTGATAATGATGTGTGACCtggaataaaaatgtttttcttacaaa
>XM_039799039.1
GTTGTATTTACCACTGTTAACGTCGGCATTTGAAGGCAATATAGCTAGCTAAGTAGCCAAACATGGCCGACACGGATGAGCCggagaagaaaagaaggagagtAGTGGAGCTGGCTGAGAAGTTAGTGATGAATTGGTAGAACTGGCGGAAGGTTTGAGGTTACCAGACAGGAGgatGGTGGTTGATGGAGGCAGTGGACGCACCTGTGAGTGGGAGGGGCGGTGGAACCATATCAAAAAGTTTTTGGAAAGGTCTGGGCCCTTCACGCATCCTGACTTTGAACCTAGCACAGAGTCTTTGCAGTTTATGTTAGAAACCTGCAAAATCCTGGTCATTGGTGCTGGTGGTCTGGGATGTGAGCTGCTGAAAGACCTGGCTTTATCAGGCTTTCATAACATTCATGTTGTTGACATGGACACCATTGATTTGTCAAACCTGAATCGACAGTTCCTCTTCAGGCCAAAAGATGTCGGTCGGCCCAAGGCGGACGTTGCAGCTGACTTCATCAACAGCCGCATACCTGGGTGCTGTGTAGTCCCACATTTTAAGAAAATTCAAGACTTAGATGAAACATTCTACAGACAATTCCATATCATTGTCTGTGGACTGGACTCTATAGTTGCCAGGAGGTGGATGAATGGTATGCTGCTGTCTTTACTGGTGTATGAGGATGGTGTCTTAGACCCAGGTTCCATCATTCCTCTAATTGATGGTGGGACTGAAGGCTTTAAAGGCAATGCCAGAGTCATTCTCCCTGGCATGACCGCCTGCATCGACTGTACCCTTGAGCTTTACCCTCCTCAGATCAACTTCCCCATGTGTACAATAGCCTCCATGCCTCGATTGCCAGAACATTGCATTGAGTATGTCCGGGTGCTGCTGTGGCCCAAAGAGACACCCTTTGGAGATGGTGTGATCCTGGATGGGGATGACCCAGAGCACATCCAGTGGGTGTACCAGAGATCCCTGGAGAGGGCAGCAGATTTCCACATAACAGGAGTCACATACAGACTAACCCAGGGTGTTGTAAAGAGGATAATTCCAGCTGTAGCGTCTACAAATGCTGTCATAGCTGCTGCTTGTGCAACTGAGGTTTTCAAAATAGCATCAAGTGCCTATATACCTCTTAATAACTACATGGTCTTCAATGATGTCGACGGGCTGTACACCTACACTTTTGAAGCAGAACGAAAGGAAAACTGTTCAGCCTGCAGCCAGGTACCTCTGGACTTGCACTTTTCTCCATCTTCCAAACTCCAGGAGATGTTGGACTACCTGACTGAGAGTGCCTCCCTACAAATGAAATCCCCTGCTATAACCGCAACAGTGGAAGGAAAGAACAAAACATTATATTTACAGtcTGTCGCTTCAATTGAACAGAGGACACGGCCAAATCTGTCCAAAACCCTGAAGGAGCTGGGGCTGACTGACGGACAAGAGCTTGCTGTAGCTGATGTCACCACACCCCAGACCATGTTGTTCAGACTCTGCTTTACCTCATAGGATAAACTCAAGCACTCCCACACAACCAGTTGATGTCATTCTTGTTTATTGGCCAACtataacttgatgcagaatatTTAAAATGGCCTAAAAACTAGAACAGTTTAAAGTGTATTCATTCTCAGTGTAAATGAACAGTGTAATTTCATCGTTTTAATTTACTTATTGACTAAAGTTAATGTTTTGCACTGAAAAGCCAAAATCATAGTTCATACCTTCTCATCTTTTGGTGAAACATTGCTTGCAAATGTCGAGGATTTTGGCATTCAATGTGTTATTTGCACTACAACCTGAAGCGTGCTATGTGCAAACAAAGAGACATAAATTTGTTACTTTGGTAAATGTATTCTGTACATGTTCtagttttaaatattttgaatatttatttattccaaCAGTTTTTTTAGTTGCAGAAACCACTGAAGTGGTAATCGACAGACACTGATAATGATGTGTGACCtggaataaaaatgtttttcttacaaa

Function

NR:

description
PREDICTED: NEDD8-activating enzyme E1 catalytic subunit isoform X1

GO: NA

KEGG:

id description
K10686 UBA3, UBE1C; NEDD8-activating enzyme E1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799035.1 False 1957 mRNA 0.43 17 8791880 8798039
XM_039799036.1 False 1923 mRNA 0.44 18 8791787 8798039
XM_039799037.1 False 1936 mRNA 0.43 17 8792088 8798039
XM_039799038.1 False 1931 mRNA 0.44 17 8791740 8798039
XM_039799039.1 True 1990 mRNA 0.44 18 8791773 8798039

Neighbor

gene id symbol gene type direction distance location
trnae-cuc_8 NA coding upstream 49963 8741706 ~ 8741777 (+)
trnae-cuc_7 NA coding upstream 52702 8738967 ~ 8739038 (+)
trnae-cuc_6 NA coding upstream 80660 8711009 ~ 8711080 (+)
trnae-cuc_5 NA coding upstream 149639 8642030 ~ 8642101 (+)
trnae-cuc_4 NA coding upstream 174671 8616998 ~ 8617069 (+)
tmf1 tmf1 coding downstream 334 8798373 ~ 8810394 (+)
trnar-acg_13 NA coding downstream 9577 8807616 ~ 8807688 (+)
eogt eogt coding downstream 12782 8810821 ~ 8827379 (+)
trnar-acg_14 NA coding downstream 18286 8816325 ~ 8816397 (+)
trnae-cuc_12 NA coding downstream 24198 8822237 ~ 8822308 (+)
G36900 NA non-coding upstream 131463 8624721 ~ 8660277 (+)
G36890 NA non-coding upstream 178753 8612296 ~ 8612987 (+)
G36887 LOC101487045 non-coding upstream 180652 8610361 ~ 8611088 (+)
G36836 NA non-coding upstream 346149 8445392 ~ 8445591 (+)
G36827 LOC100705312,LOC102203484,LOC101465335,LOC104933013 non-coding upstream 366209 8422173 ~ 8425531 (+)
LOC120558080 NA non-coding downstream 87734 8885773 ~ 8940038 (+)
G36988 NA non-coding downstream 241424 9039463 ~ 9039769 (+)
G36991 NA non-coding downstream 432041 9230080 ~ 9230363 (+)
G36990 NA non-coding downstream 432425 9230464 ~ 9230954 (+)
G37023 NA non-coding downstream 561465 9359504 ~ 9410661 (+)
G36744 NA other upstream 563020 8227762 ~ 8228720 (+)
hcfc1a hcfc1,LOC102799381,LOC102206223 other upstream 1485397 7288907 ~ 7306343 (+)
G36458 LOC100304472,LOC107385856 other upstream 1519372 7209996 ~ 7272368 (+)
si:dkey-245f22.3 NA other upstream 1604526 7183199 ~ 7187214 (+)
setmar LOC100698471 other upstream 2153217 6635280 ~ 6638523 (+)
prickle2b prickle2 other downstream 962194 9760233 ~ 9856656 (+)
G37197 NA other downstream 1507148 10305187 ~ 10309996 (+)
glrx glrx other downstream 1589869 10387908 ~ 10396187 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other downstream 2199191 10997230 ~ 11012909 (+)
G37525 evc2 other downstream 2554039 11352078 ~ 11352387 (+)

Expression


Co-expression Network