mybphb (LOC103464713,LOC107089157)


Basic Information

Item Value
gene id mybphb
gene name LOC103464713,LOC107089157
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 26114854 ~ 26124738 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799138.1
GCAGGAATGTCGGCATTGGATCCAGTTTTAAGGTCGGACTTAACCGCGTTGGGAATTAGCTGCAGCCGTCAACATGCCGTCCAAGCCTGCCCCGATCAAGAAGGCGGCTAAGAAAGAACCAGccaagaaggaggaggagaaggctCCTGAGGCCGCTCCGGCCGAAGCCGCCCCAGCCCCCgctgaggctgctgctgctgctgcccctgCCGAGGGAGAGGCCCCCGCTGCCCCGCCAGCTGAGGAGCCCGCCCCTCCAGCCGCAGATGCTGCTGCCGCTccagctgcagaggaaggtgCTCCCGCTGCTGATGCCGAAGCGCCTGCTGATGGTGAAGCTCCTGCACCAGAAGAGCCTAAAGCGCCCACAcctccaccacccccacccaaaGAGCCCACAAGTGCCCCAGTGGATCTGTTTGTTGAGGATAAGAATGACACTTCAGTCTCCATCATTTGGAGCCAGCCAGAGGTCGTCGGCGATTCCGGTCTGGATGGATACACCATTGAAGTCTGCAAGGATGGAACTGAGGACTGGAAAGCAGTCAATGAGGATCTGCAGAAGTCCTGCCGCTACGTTATCAAGAACCAGGCCACCGGTGACCGTCTGAAGATCCGTGTGGTGGCTGTGAATGCTGGCGGCCGCAGCCCGCCTGTCGCCCTCCCCGAGGCTGTCCTGGTGAAGGAGGTCGCTAATCGTCCCAAGGTCCGCCTGCCACGTTTCCTCAGGCAGAGATACGTCGCTCAAGTTGGAGAGAAGATCAACCTGAGCATCCCCTTCACAGGTAAACCCAAACCTGTAGTCAGCTGGACAAAGGACGGGCAGCCCCTGGACACAAAGAGGGTGAACATCCGCAGCACTGACAGAGACAGCATCCTGTTTATCCGTACAGCCGAGAGAGAAGACTCTGGCGTGTATGAGATGTGTGTGAAGGTGGAGGACTTCGAAGACAAGGCTTCACTCATCCTTCAAATTGTTGAGCTGCCGGGGCCTCCCGCCACTGTGAAGATTGTGGATACCTGGGGCTTCAATGTTGCTCTGGAATGGACTGCACCCAAAGACAATGGAAACACAGAAATCACAGGTTACACAATCCAGAAAGCCGACAAAAAGACTGGAgACTGGTTCACTGTGTTGGATCATTACCACAGACTGAATGCCACTATCTCCGACCTCATCATGGGCAACGTCTACAAGTTCAGAGTGTTCGCTGAAAACAAGGTTGGAGTAAGCGAGAACGCTACCGTTGCAAAGGAGGAGGCCACAATCTTGAAGACAGCTATTGACTACAAGCCTCCTGAGTACAAGGAACGCGACTTTACCGAGGCGCCCAAGTTCACCACCTCTCTGAACGACAGAGCCACCACTGTCGGCTACAGCACCAAGCTGCTGTGCTCCGTCAGGGGATTCCCAAAACCCAAGGTTATATGGATGAAGAACCAGATGATTATTGGAGACGACCCCAAGTACAGGCAGGTTTGCGTCCAGGGAATCTGCACTCTGGAGATCCGTAAGCCTGGGAACTTTGACGGAGGGGTGTACACCTGCAAAGCCAAGAACACTCTCGGAGAAGCAGTGGTCAGCTGCAAGCTGGAGGTCAAACAACCAGTGGTTCCAGATGCAGAGAAGAAATAAGTCAACATTCAGGTCAGAAATGGGAGCAGAAGGAATGAGGTCTTTGCAGCATAAGGGAGGTGCTGGATTCCTGGAAGAACATGTATATATGGATGGTGACCACGCTACCCTGTGTTATGATGAACAATTGTTGTCGCTTCATGCCTTTATCGTTGACTCCATTATTAAGTCCATATCCGTGTCCACAATCAGCTTCCCAACGATACTGTCCATGATAACTAAATCATCTTGTCAGTCTAATTAGGGGTACACCAGGACTTCTACAGCAGGAATTTACTGTTCCTCATAGGGAACTACATGTAACATCTACGTGTTTatatcaataaataattttatttctggtt
>XM_039799139.1
GCAGGAATGTCGGCATTGGATCCAGTTTTAAGGTCGGACTTAACCGCGTTGGGAATTAGCTGCAGCCGTCAACATGCCGTCCAAGCCTGCCCCGATCAAGAAGGCGGCTAAGAAAGAACCAGccaagaaggaggaggagaaggctCCTGAGGCCGCTCCGGCCGAAGCCGCCCCAGCCCCCgctgaggctgctgctgctgctgcccctgCCGAGGGAGAGGCCCCCGCTGCCCCGCCAGCTGAGGAGCCCGCCCCTCCAGCCGCAGATGGTGAAGCTCCTGCACCAGAAGAGCCTAAAGCGCCCACAcctccaccacccccacccaaaGAGCCCACAAGTGCCCCAGTGGATCTGTTTGTTGAGGATAAGAATGACACTTCAGTCTCCATCATTTGGAGCCAGCCAGAGGTCGTCGGCGATTCCGGTCTGGATGGATACACCATTGAAGTCTGCAAGGATGGAACTGAGGACTGGAAAGCAGTCAATGAGGATCTGCAGAAGTCCTGCCGCTACGTTATCAAGAACCAGGCCACCGGTGACCGTCTGAAGATCCGTGTGGTGGCTGTGAATGCTGGCGGCCGCAGCCCGCCTGTCGCCCTCCCCGAGGCTGTCCTGGTGAAGGAGGTCGCTAATCGTCCCAAGGTCCGCCTGCCACGTTTCCTCAGGCAGAGATACGTCGCTCAAGTTGGAGAGAAGATCAACCTGAGCATCCCCTTCACAGGTAAACCCAAACCTGTAGTCAGCTGGACAAAGGACGGGCAGCCCCTGGACACAAAGAGGGTGAACATCCGCAGCACTGACAGAGACAGCATCCTGTTTATCCGTACAGCCGAGAGAGAAGACTCTGGCGTGTATGAGATGTGTGTGAAGGTGGAGGACTTCGAAGACAAGGCTTCACTCATCCTTCAAATTGTTGAGCTGCCGGGGCCTCCCGCCACTGTGAAGATTGTGGATACCTGGGGCTTCAATGTTGCTCTGGAATGGACTGCACCCAAAGACAATGGAAACACAGAAATCACAGGTTACACAATCCAGAAAGCCGACAAAAAGACTGGAgACTGGTTCACTGTGTTGGATCATTACCACAGACTGAATGCCACTATCTCCGACCTCATCATGGGCAACGTCTACAAGTTCAGAGTGTTCGCTGAAAACAAGGTTGGAGTAAGCGAGAACGCTACCGTTGCAAAGGAGGAGGCCACAATCTTGAAGACAGCTATTGACTACAAGCCTCCTGAGTACAAGGAACGCGACTTTACCGAGGCGCCCAAGTTCACCACCTCTCTGAACGACAGAGCCACCACTGTCGGCTACAGCACCAAGCTGCTGTGCTCCGTCAGGGGATTCCCAAAACCCAAGGTTATATGGATGAAGAACCAGATGATTATTGGAGACGACCCCAAGTACAGGCAGGTTTGCGTCCAGGGAATCTGCACTCTGGAGATCCGTAAGCCTGGGAACTTTGACGGAGGGGTGTACACCTGCAAAGCCAAGAACACTCTCGGAGAAGCAGTGGTCAGCTGCAAGCTGGAGGTCAAACAACCAGTGGTTCCAGATGCAGAGAAGAAATAAGTCAACATTCAGGTCAGAAATGGGAGCAGAAGGAATGAGGTCTTTGCAGCATAAGGGAGGTGCTGGATTCCTGGAAGAACATGTATATATGGATGGTGACCACGCTACCCTGTGTTATGATGAACAATTGTTGTCGCTTCATGCCTTTATCGTTGACTCCATTATTAAGTCCATATCCGTGTCCACAATCAGCTTCCCAACGATACTGTCCATGATAACTAAATCATCTTGTCAGTCTAATTAGGGGTACACCAGGACTTCTACAGCAGGAATTTACTGTTCCTCATAGGGAACTACATGTAACATCTACGTGTTTatatcaataaataattttatttctggtt

Function

NR:

description
PREDICTED: myosin-binding protein H-like isoform X2

GO: NA

KEGG:

id description
K24494 MYBPH; myosin-binding protein H

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799138.1 True 1980 mRNA 0.53 14 26114854 26124738
XM_039799139.1 False 1917 mRNA 0.53 13 26114854 26124738

Neighbor

gene id symbol gene type direction distance location
nav1b nav1,LOC103355819 coding upstream 681 26033751 ~ 26114173 (+)
pkp1b NA coding upstream 117299 25985150 ~ 25997555 (+)
smpd2b smpd2,LOC102787414 coding upstream 130811 25974025 ~ 25984043 (+)
tead3b tead3,LOC103355928,LOC108231638,LOC102786312 coding upstream 141925 25938311 ~ 25972929 (+)
LOC120557320 tulp1 coding upstream 179579 25923207 ~ 25935275 (+)
LOC120557651 LOC107089162,LOC104944127,LOC103355802 coding downstream 4856 26129594 ~ 26170085 (+)
nudt3b nudt3 coding downstream 406775 26531513 ~ 26540962 (+)
pacsin1b LOC104965611,LOC103355721 coding downstream 426079 26550817 ~ 26585593 (+)
snrpc NA coding downstream 505691 26630429 ~ 26633652 (+)
slc2a1b slc2a1,LOC108231650,LOC104928076 coding downstream 665746 26790484 ~ 26815402 (+)
G41754 LOC102788777,LOC107089146,LOC101487148,LOC104918388,LOC100698513 non-coding upstream 87644 26026555 ~ 26027210 (+)
G41746 LOC103355883,LOC106954216,LOC104941313 non-coding upstream 112103 26001481 ~ 26002751 (+)
LOC120557323 NA non-coding upstream 191791 25921754 ~ 25923063 (+)
G41694 rplp2,LOC104941383,LOC104918380 non-coding upstream 227121 25885222 ~ 25887733 (+)
G41630 NA non-coding upstream 568014 25546509 ~ 25546840 (+)
LOC120557409 NA non-coding downstream 97339 26222077 ~ 26252094 (+)
G41827 LOC106518302,LOC101482215,LOC102196619,LOC102290668 non-coding downstream 150384 26275122 ~ 26275929 (+)
G41834 LOC104955002 non-coding downstream 200067 26324805 ~ 26338204 (+)
G41835 NA non-coding downstream 219399 26344137 ~ 26345459 (+)
LOC120557964 NA non-coding downstream 275715 26400453 ~ 26404902 (+)
LOC120558088 LOC104941431 other upstream 207116 25904769 ~ 25907738 (+)
LOC120558082 kcna10,LOC104941363 other upstream 241935 25767092 ~ 25872919 (+)
slc16a1a slc16a1,LOC102208676,LOC102781600 other upstream 423919 25682407 ~ 25690935 (+)
slc12a5a LOC103355988 other upstream 804301 25208156 ~ 25310553 (+)
bloc1s1 bloc1s1,LOC102796612 other upstream 1554536 24555525 ~ 24560318 (+)
G41825 NA other downstream 143864 26268602 ~ 26273315 (+)
G41850 rps10,LOC102793608 other downstream 417769 26542507 ~ 26548799 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other downstream 528113 26652851 ~ 26764737 (+)
ephb2b LOC104917933,LOC103376520 other downstream 1546225 27670963 ~ 27823260 (+)
G42449 NA other downstream 3115675 29240413 ~ 29242253 (+)

Expression


Co-expression Network