XLOC_005106 (si:dkey-32n7.8)



Basic Information


Item Value
gene id XLOC_005106
gene name si:dkey-32n7.8
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 4196493 ~ 4199728 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00009907
ATGGACAACACTGTCAATGGAAGCATCTCCTATCGGCAGCTCACTAAAGGTGGACTCTTAGTAGCAGCATCAAACGACATAAACCAGTATTTTCCACATCTGAACTTCACTGCCTATTGGATCTTTATTGCTACTTGGGATAAAGTGCCGTACTTTAATGACTCACAGTCGAGCTCATCTTTTCAAGTTATTTTGGTCTCTGGTGGCTCTCTGTCCTTTGTCATGATCAACTATGGAAACATCTCCTCAACGGATCAGTGGTTTCAGGCTGGCTACGGCACAATGAACTTGACAAATTATTTTTCAGTCCCCATTCCCACTGCAAATAAGCTGTCCAACTCCAGCAACGTCAATCTA

Function


symbol description
si:dkey-32n7.8 Predicted to act upstream of or within cell-matrix adhesion.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000090630

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00009907 True 357 mRNA 0.43 3 4196493 4199728

Neighbor


gene id symbol gene type direction distance location
XLOC_005105 NA coding downstream 2189 4190022 ~ 4194304 (-)
XLOC_005104 si:dkey-32n7.7 coding downstream 10939 4170921 ~ 4185554 (-)
XLOC_005103 NA coding downstream 26794 4143594 ~ 4169699 (-)
XLOC_005102 NA coding downstream 66673 4089737 ~ 4129820 (-)
XLOC_005101 aldoab coding downstream 126435 4052180 ~ 4070058 (-)
XLOC_005107 si:dkey-32n7.9 coding upstream 2098 4201826 ~ 4206869 (-)
XLOC_005108 vkorc1 coding upstream 17450 4217178 ~ 4220713 (-)
XLOC_005109 NA coding upstream 32129 4231857 ~ 4232505 (-)
XLOC_005110 zgc:92313 coding upstream 41730 4241458 ~ 4249000 (-)
XLOC_005111 NA coding upstream 75182 4274910 ~ 4287034 (-)
XLOC_005094 NA non-coding downstream 331259 3860464 ~ 3865234 (-)
XLOC_005092 NA non-coding downstream 410111 3782621 ~ 3786382 (-)
XLOC_005112 CU571308.1 non-coding upstream 86638 4286366 ~ 4286480 (-)
XLOC_005126 NA non-coding upstream 477458 4677186 ~ 4683350 (-)
XLOC_005128 NA non-coding upstream 617561 4817289 ~ 4817860 (-)

Expression



Co-expression Network